Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000076g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.5e-82 308.1 147 100.0
Nitab4.5_0000537g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.8e-33 146.4 117 65.0
Nitab4.5_0003995g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.1e-18 94.7 63 71.4
Ah.06g185680 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.5e-16 90.1 201 32.3
CAN.G1091.9 Capsicum annuum HOM05D007353 ORTHO05D009077 2.0e-16 89.7 91 51.6
Nitab4.5_0000981g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.7e-16 88.2 61 67.2
Sopen01g023390 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-14 84.0 192 31.8
Sopen12g026550 Solanum pennellii HOM05D000004 ORTHO05D000002 9.2e-14 80.9 97 42.3
Ah.10g030160 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.5e-13 79.0 116 42.2
MELO3C028927.2 Cucumis melo HOM05D000924 ORTHO05D001209 3.8e-12 75.5 102 42.2
Sopen02g009660 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-11 70.9 51 62.7
Sopen12g017770 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-10 68.6 98 35.7
Nitab4.5_0003086g0090 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.3e-09 66.2 42 71.4
TPR.G18340 Trifolium pratense HOM05D000002 ORTHO05D000001 3.1e-09 65.9 59 54.2
VMungo1215G2822 Vigna mungo HOM05D000420 ORTHO05D000110 3.1e-09 65.9 115 32.2
Nitab4.5_0007343g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.0e-09 65.5 64 56.2
FvH4_3g12191 Fragaria vesca HOM05D000002 ORTHO05D000001 5.2e-09 65.1 113 31.9
Sopen08g012030 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-09 65.1 98 35.7
AUR62004989 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.8e-09 64.7 109 34.9
Nitab4.5_0000007g0160 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.8e-09 64.7 37 78.4
Sopen07g015810 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-09 64.7 98 35.7
Sopen12g020360 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-08 63.5 105 31.4
FvH4_4g05873 Fragaria vesca HOM05D000002 ORTHO05D000001 2.0e-08 63.2 117 31.6
FvH4_7g01381 Fragaria vesca HOM05D000002 ORTHO05D000001 2.0e-08 63.2 117 32.5
Sopen03g025850 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-08 63.2 98 34.7
Sopen05g022970 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-08 63.2 98 34.7
Sopen12g014220 Solanum pennellii HOM05D000014 ORTHO05D000001 2.0e-08 63.2 98 35.7
Nitab4.5_0002844g0010 Nicotiana tabacum HOM05D007353 ORTHO05D286310 2.6e-08 62.8 59 57.6
Sopen00g002370 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen01g010970 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen01g012380 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen01g047890 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen01g054370 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen02g004910 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 107 31.8
Sopen02g009940 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen02g012110 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen02g025170 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen03g010390 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen03g022610 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen04g011990 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen04g018280 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen04g019520 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen05g007960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen05g010120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen06g009700 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen06g013210 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen07g005670 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen07g008450 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen07g016530 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen07g019420 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen08g009010 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen08g009670 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen09g025290 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen10g027840 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen11g014430 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen11g019300 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen11g020960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen11g022640 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen11g023000 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen12g009140 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen12g009410 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen12g009510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
Sopen12g019660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.8 98 34.7
ClCG06G007940 Citrullus lanatus HOM05D007353 ORTHO05D009077 3.4e-08 62.4 46 60.9
FvH4_4g23911 Fragaria vesca HOM05D000002 ORTHO05D000001 3.4e-08 62.4 100 36.0
Sopen03g024520 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 100 32.0
Sopen03g025060 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 98 34.7
Sopen04g009010 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 98 34.7
Sopen05g025680 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 98 34.7
Sopen07g016330 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 98 34.7
Sopen08g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 98 33.7
Sopen10g005240 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 98 34.7
Sopen12g018220 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-08 62.4 98 34.7
Sopen01g011450 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-08 62.0 98 34.7
Sopen04g023620 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-08 62.0 98 34.7
Sopen05g022700 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-08 62.0 98 34.7
Sopen10g018450 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-08 62.0 101 33.7
Sopen02g003130 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.6 98 33.7
Sopen03g013960 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.6 99 32.3
Sopen07g011690 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.6 96 32.3
CAN.G134.191 Capsicum annuum HOM05D000002 ORTHO05D000001 7.5e-08 61.2 99 35.4
FvH4_3g16171 Fragaria vesca HOM05D000002 ORTHO05D000001 7.5e-08 61.2 100 34.0
Sopen06g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 61.2 89 32.6
Sopen10g006590 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 61.2 97 34.0
FvH4_1g25682 Fragaria vesca HOM05D000002 ORTHO05D000001 9.8e-08 60.8 117 33.3
Sopen01g049740 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen02g006210 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen04g009250 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen04g009900 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen04g020820 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen05g021340 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen05g022710 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen07g006670 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen07g009610 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen07g012190 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen07g018530 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen08g008030 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 98 33.7
Sopen01g011680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.5 96 32.3
Sopen10g007980 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.5 98 33.7
Sopen03g015330 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 98 32.7
Sopen05g013590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 107 31.8
Sopen10g020060 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 98 33.7
Sopen10g022590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 110 30.0
Sopen10g022890 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.1 98 34.7
Sopen08g005690 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 59.7 96 31.2
CAN.G195.52 Capsicum annuum HOM05D000002 ORTHO05D000001 2.9e-07 59.3 119 31.1
Nitab4.5_0007144g0070 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.9e-07 59.3 43 65.1
Sopen05g010400 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 59.3 98 32.7
Sopen05g018730 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 59.3 98 34.7
CAN.G257.16 Capsicum annuum HOM05D000133 ORTHO05D000259 3.7e-07 58.9 110 30.9
Nitab4.5_0009805g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.7e-07 58.9 44 63.6
Sopen01g006850 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 58.9 83 34.9
Sopen04g020490 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 58.9 98 33.7
Sopen06g031900 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 58.9 98 32.7
Sopen06g017140 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.5 101 31.7
Nitab4.5_0003677g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.4e-07 58.2 42 64.3
Oeu019217.1 Olea europaea HOM05D000002 ORTHO05D000001 6.4e-07 58.2 100 34.0
Sopen02g001760 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 58.2 98 33.7
Sopen09g024820 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 58.2 95 31.6
CAN.G700.27 Capsicum annuum HOM05D002709 ORTHO05D002914 8.3e-07 57.8 153 28.1
ECA236G1088 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-07 57.8 115 31.3
Sopen07g016990 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-07 57.8 98 33.7
CSS0031148 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 101 33.7
RcHm_v2.0_Chr2g0151961 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 98 32.7
RcHm_v2.0_Chr2g0171331 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 99 32.3
Sopen01g029300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 98 38.8
CSS0009806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 108 32.4
CSS0023537 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 108 32.4
CSS0034014 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 108 32.4
CSS0040458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 108 32.4
CSS0043973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 56.6 108 32.4
CAN.G1480.1 Capsicum annuum HOM05D000002 ORTHO05D000001 1.9e-06 56.6 100 37.0
CSS0046993 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 108 30.6
FvH4_5g08912 Fragaria vesca HOM05D000002 ORTHO05D000001 2.4e-06 56.2 96 32.3
Nitab4.5_0000344g0140 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.4e-06 56.2 36 69.4
Sopen05g014350 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 102 33.3
CAN.G956.3 Capsicum annuum HOM05D000927 ORTHO05D000850 3.2e-06 55.8 163 25.2
Sopen04g010540 Solanum pennellii HOM05D000004 ORTHO05D000001 3.2e-06 55.8 102 31.4
Sopen09g014450 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 102 32.4
CSS0009573 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-06 55.5 108 32.4
CAN.G1324.1 Capsicum annuum HOM05D000164 ORTHO05D000001 4.1e-06 55.5 99 32.3
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 4.1e-06 55.5 138 26.1
ECA247G1739 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-06 55.5 138 25.4
Sopen03g026580 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 55.5 89 30.3
Sopen06g015960 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 55.5 98 32.7
CSS0036314 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-06 55.1 108 31.5
CSS0041750 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-06 55.1 82 35.4
Sopen07g014190 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-06 55.1 109 30.3
Sopen08g017530 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-06 55.1 101 32.7
Ah.11g040110 Amaranthus hybridus HOM05D000002 ORTHO05D000001 7.0e-06 54.7 47 53.2
CAN.G1315.4 Capsicum annuum HOM05D001584 ORTHO05D001472 7.0e-06 54.7 110 30.9
Nitab4.5_0004496g0090 Nicotiana tabacum HOM05D007353 ORTHO05D009077 7.0e-06 54.7 36 66.7
Sopen05g010310 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-06 54.7 105 29.5
Sopen12g009530 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-06 54.7 98 30.6
CAN.G504.26 Capsicum annuum HOM05D000217 ORTHO05D000121 9.2e-06 54.3 99 32.3
ECA233G1049 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.3 139 24.5
ECA233G2864 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.3 138 25.4
ECA233G5063 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.3 84 28.6
ECA236G0149 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.3 131 26.7
ECA247G3121 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.3 84 28.6
Nitab4.5_0007409g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.2e-06 54.3 59 54.2
Nitab4.5_0014477g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.2e-06 54.3 53 50.9
Sopen08g006650 Solanum pennellii HOM05D000014 ORTHO05D000016 9.2e-06 54.3 96 28.1
Sopen08g011700 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 54.3 110 29.1


User provided reference genes

Program Settings