Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000075g0170 Nicotiana tabacum HOM05D004493 ORTHO05D005117 0.0e+00 1578.9 1009 100.0
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 0.0e+00 1433.7 888 93.9
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 0.0e+00 1088.9 1012 73.2
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 9.2e-307 1057.0 1047 69.8
Peaxi162Scf00186g00168 Petunia axillaris HOM05D004493 ORTHO05D005117 1.0e-289 1000.3 864 69.8
Solyc02g032450.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 1.6e-194 684.1 819 61.4
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 4.8e-146 523.1 915 46.1
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 4.8e-146 523.1 915 46.1
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 5.7e-123 446.4 905 41.0
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 1.3e-114 418.7 903 39.1
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 4.1e-113 413.7 1066 41.0
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 1.2e-112 412.1 1034 41.6
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 1.7e-111 408.3 925 38.6
Atru.chr3.2057 Acer truncatum HOM05D004493 ORTHO05D005117 8.0e-109 399.4 937 39.8
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 5.2e-108 396.7 931 40.3
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 8.8e-108 396.0 923 40.0
Gohir.A08G083000 Gossypium hirsutum HOM05D004493 ORTHO05D005117 4.4e-107 393.7 928 38.7
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 5.7e-107 393.3 885 40.1
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 7.5e-107 392.9 922 39.8
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 1.3e-106 392.1 1069 41.2
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 1.4e-105 388.7 908 37.6
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 1.8e-105 388.3 914 40.0
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 1.2e-104 385.6 911 37.7
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 3.5e-104 384.0 942 37.6
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 7.7e-104 382.9 904 39.4
COL.COLO4_35068 Corchorus olitorius HOM05D004493 ORTHO05D005117 5.5e-102 376.7 914 36.1
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 3.6e-101 374.0 896 37.9
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 1.0e-100 372.5 915 36.8
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.8e-100 371.7 820 42.4
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 2.6e-99 367.9 895 37.8
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 5.7e-99 366.7 1028 41.7
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 2.4e-97 361.3 912 37.9
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 5.4e-97 360.1 899 35.8
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 1.6e-96 358.6 906 36.5
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 1.0e-95 355.9 1085 40.4
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 3.3e-94 350.9 929 36.2
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 9.5e-94 349.4 913 36.5
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 2.1e-93 348.2 895 35.8
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 9.8e-91 339.3 909 35.2
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 5.4e-89 333.6 927 35.6
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.0e-87 329.3 903 35.1
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 8.6e-87 326.2 975 37.0
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 1.1e-84 319.3 923 38.4
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 2.3e-84 318.2 921 38.7
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 8.9e-84 316.2 900 40.2
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 8.9e-84 316.2 938 36.8
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 1.5e-83 315.5 879 38.0
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 4.4e-83 313.9 879 35.8
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 2.2e-82 311.6 977 33.1
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 3.7e-82 310.8 877 36.3
Eucgr.J01744 Eucalyptus grandis HOM05D004493 ORTHO05D005117 1.4e-81 308.9 1090 41.4
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 2.4e-81 308.1 909 33.6
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 4.1e-81 307.4 897 37.7
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 4.1e-81 307.4 916 36.1
Solyc02g032380.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 5.4e-81 307.0 217 77.4
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 1.2e-80 305.8 962 35.0
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 2.1e-80 305.1 945 34.0
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 6.0e-80 303.5 898 34.2
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 3.9e-79 300.8 919 35.4
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 3.9e-79 300.8 908 33.8
VMungo0720G0327 Vigna mungo HOM05D004493 ORTHO05D005117 8.6e-79 299.7 953 35.2
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.6e-77 295.4 848 34.4
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 8.1e-77 293.1 948 32.9
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 1.1e-76 292.7 912 35.2
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 3.1e-76 291.2 938 32.3
QL01p007875 Quercus lobata HOM05D004493 ORTHO05D005117 3.4e-75 287.7 547 42.4
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 1.3e-74 285.8 913 34.5
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 8.3e-74 283.1 922 33.2
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 8.3e-74 283.1 981 35.4
Ah.06g182280 Amaranthus hybridus HOM05D004493 ORTHO05D005117 1.1e-73 282.7 842 38.0
MSTRG.929 Avicennia marina HOM05D004493 ORTHO05D005117 9.2e-73 279.6 839 35.8
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 3.5e-72 277.7 950 33.6
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 7.8e-72 276.6 979 31.1
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 1.3e-71 275.8 988 30.8
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 1.3e-71 275.8 1002 34.5
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 3.0e-71 274.6 897 35.6
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 3.9e-71 274.2 950 33.5
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 3.9e-71 274.2 910 30.9
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 2.8e-69 268.1 902 34.3
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 1.1e-68 266.2 885 37.3
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 2.4e-68 265.0 897 32.4
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 6.8e-68 263.5 895 33.6
Sc06g0004140 Simmondsia chinensis HOM05D004493 ORTHO05D005117 3.4e-67 261.2 906 32.5
Hund28035 Selenicereus undatus HOM05D004493 ORTHO05D005117 7.6e-67 260.0 861 31.8
Hund28037 Selenicereus undatus HOM05D004493 ORTHO05D005117 7.6e-67 260.0 861 31.8
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 3.2e-65 254.6 915 34.0
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 4.2e-65 254.2 844 35.3
Dinv13491 Davidia involucrata HOM05D004493 ORTHO05D005117 8.7e-63 246.5 657 40.0
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 1.1e-62 246.1 958 30.6
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 1.6e-61 242.3 902 33.5
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 7.6e-59 233.4 334 47.0
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 7.1e-49 200.3 204 55.4
QL01p007909 Quercus lobata HOM05D004453 ORTHO05D005375 7.4e-46 190.3 651 34.4
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 6.2e-45 187.2 846 30.1
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.6e-40 172.6 871 27.2
CDE02G1557 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 2.3e-39 168.7 952 28.6
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 3.3e-38 164.9 868 27.0
vmacro09616 Vaccinium macrocarpon HOM05D004493 ORTHO05D005117 7.4e-38 163.7 792 34.6
Potri.001G001201 Populus trichocarpa HOM05D004493 ORTHO05D005117 1.3e-37 162.9 223 45.3
QL01p007891 Quercus lobata HOM05D004493 ORTHO05D005117 3.3e-30 138.3 267 42.3
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 4.3e-30 137.9 217 39.2
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 4.8e-29 134.4 103 65.0
Lj2A889T20 Lonicera japonica HOM05D004493 ORTHO05D005117 6.9e-28 130.6 674 30.3
Sopen01g019210 Solanum pennellii HOM05D004493 ORTHO05D005117 1.5e-22 112.8 161 50.9
SEGI_27502 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 1.1e-20 106.7 1005 26.2
MSTRG.12811 Avicennia marina HOM05D004493 ORTHO05D005117 3.1e-20 105.1 114 58.8
Zm00001eb202920 Zea mays HOM05D004493 ORTHO05D005117 3.1e-20 105.1 106 47.2
Cpa.g.sc119.16 Carica papaya HOM05D004493 ORTHO05D005117 9.1e-20 103.6 80 62.5
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 1.8e-15 89.4 271 29.2
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis HOM05D004493 ORTHO05D005117 1.5e-14 86.3 231 30.7
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 5.7e-14 84.3 68 55.9
ATR0906G001 Amborella trichopoda HOM05D004493 ORTHO05D005117 7.2e-09 67.4 857 24.2
Pp3c13_12950 Physcomitrium patens HOM05D004493 ORTHO05D005117 6.1e-08 64.3 912 24.6


User provided reference genes

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