Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 3.2e-153 545.0 273 100.0
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 1.5e-123 446.4 271 83.8
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 9.1e-116 420.6 250 84.4
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.2e-115 420.2 256 81.2
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.0e-114 417.2 234 87.2
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 2.9e-114 415.6 256 80.5
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.6e-112 409.8 234 83.8
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 6.7e-111 404.4 211 94.8
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 2.6e-110 402.5 237 81.9
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 3.3e-110 402.1 234 82.5
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 5.7e-110 401.4 256 77.7
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 7.4e-110 401.0 264 76.5
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 7.4e-110 401.0 234 82.9
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 1.3e-109 400.2 252 80.6
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 2.8e-109 399.1 237 82.7
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 8.2e-109 397.5 252 79.0
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 1.1e-108 397.1 235 80.9
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 1.1e-108 397.1 270 75.2
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 2.4e-108 396.0 252 78.6
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 3.1e-108 395.6 266 75.6
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 3.1e-108 395.6 243 81.9
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 5.3e-108 394.8 234 81.2
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 7.0e-108 394.4 234 82.5
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 9.1e-108 394.0 234 82.1
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.0e-107 392.9 234 82.1
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 2.6e-107 392.5 234 82.9
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 3.5e-107 392.1 234 81.2
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 4.5e-107 391.7 235 81.7
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 4.5e-107 391.7 252 77.0
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 5.9e-107 391.3 234 81.6
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 5.9e-107 391.3 237 83.1
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 7.7e-107 391.0 234 81.6
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 6.5e-106 387.9 237 82.3
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 6.5e-106 387.9 252 77.0
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 6.5e-106 387.9 234 81.6
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.1e-105 387.1 237 81.4
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.1e-105 387.1 237 81.9
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 1.4e-105 386.7 266 75.2
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.4e-105 386.7 266 75.2
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.4e-105 386.7 266 75.2
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 2.5e-105 386.0 237 81.4
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.5e-105 386.0 237 81.4
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.5e-105 386.0 234 81.6
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 3.2e-105 385.6 234 81.6
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 4.2e-105 385.2 237 81.0
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 4.2e-105 385.2 234 82.1
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 7.2e-105 384.4 237 81.0
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.2e-104 383.6 237 81.9
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 6.1e-104 381.3 233 82.0
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 8.0e-104 380.9 237 80.2
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.8e-103 379.8 254 76.8
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 3.0e-103 379.0 234 79.5
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 3.0e-103 379.0 234 79.5
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.6e-102 375.9 239 79.1
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 1.3e-101 373.6 234 78.2
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 6.3e-101 371.3 318 61.3
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 6.3e-101 371.3 318 61.3
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 8.2e-101 370.9 235 76.6
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.8e-100 369.8 234 77.8
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 9.1e-100 367.5 234 77.4
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 9.1e-100 367.5 239 76.2
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.0e-99 366.3 235 79.1
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 7.7e-99 364.4 237 75.9
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 7.7e-99 364.4 267 70.0
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.7e-98 363.2 234 76.5
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.2e-98 362.8 267 69.7
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.8e-98 362.1 267 69.7
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.1e-97 360.5 211 83.9
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 3.2e-97 359.0 298 64.8
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 5.5e-97 358.2 234 75.2
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 9.4e-97 357.5 234 76.5
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 2.7e-96 355.9 234 73.1
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 2.0e-94 349.7 237 73.0
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 4.4e-94 348.6 252 69.4
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 7.5e-94 347.8 237 75.5
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 9.7e-94 347.4 211 82.0
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.0e-91 339.7 235 74.0
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 4.5e-91 338.6 256 67.2
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 5.0e-90 335.1 256 66.0
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 2.3e-87 326.2 269 65.4
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 5.7e-86 321.6 193 80.3
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 2.4e-84 316.2 235 68.9
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.6e-83 313.5 223 70.9
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.5e-83 312.4 234 67.5
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.3e-82 310.5 194 79.4
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 5.0e-82 308.5 197 80.2
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.5e-81 306.2 234 67.1
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.3e-77 291.6 295 56.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 7.0e-76 288.1 190 72.1
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.5e-75 285.8 275 56.4
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.0e-74 284.3 234 66.7
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 2.3e-74 283.1 234 60.7
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 5.0e-74 282.0 234 64.5
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 6.6e-74 281.6 170 80.6
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.0e-71 272.3 235 59.1
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 8.9e-71 271.2 246 57.7
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 4.9e-69 265.4 272 52.2
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 8.3e-69 264.6 177 74.6
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.1e-68 262.3 235 57.4
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 3.5e-67 259.2 157 81.5
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.1e-63 247.7 348 44.0
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.4e-63 247.3 211 62.1
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 4.9e-61 238.8 298 47.3
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 7.5e-54 214.9 192 59.9
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.6e-51 207.2 195 56.9
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 2.4e-47 193.4 251 45.4
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.7e-42 177.2 189 54.0
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 4.2e-36 156.0 130 63.1
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.6e-35 154.1 103 76.7
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 4.3e-17 92.8 68 67.6
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 5.7e-17 92.4 69 63.8
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 7.1e-12 75.5 98 43.9
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 2.1e-11 73.9 91 46.2
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 8.7e-10 68.6 42 78.6
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.3e-08 64.7 48 68.8
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 6.3e-08 62.4 96 35.4
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 1.8e-07 60.8 365 21.1
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 4.5e-06 56.2 47 53.2


User provided reference genes

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