Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 9.9e-141 503.4 254 100.0
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 9.3e-139 496.9 254 98.4
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.2e-123 445.3 241 92.1
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 7.4e-120 434.1 241 90.0
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.7e-114 415.6 241 86.7
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.4e-110 403.3 241 83.8
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 5.3e-110 401.4 238 81.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 2.0e-109 399.4 241 81.7
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 3.2e-107 392.1 241 80.1
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 2.7e-106 389.0 231 82.3
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.5e-106 388.7 237 80.6
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.9e-106 387.5 237 80.6
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.8e-105 386.3 231 81.8
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.8e-105 386.3 236 78.8
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 2.3e-105 386.0 240 77.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 3.0e-105 385.6 241 78.4
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.1e-104 383.6 241 78.8
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 1.5e-104 383.3 240 78.3
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 7.4e-104 380.9 231 81.4
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.3e-103 380.2 231 81.0
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.6e-103 379.8 233 79.8
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.6e-103 379.8 233 79.8
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 1.6e-103 379.8 231 81.8
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.6e-103 379.8 237 79.7
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 2.8e-103 379.0 271 72.0
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 4.8e-103 378.3 231 80.1
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 8.2e-103 377.5 244 78.7
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 1.8e-102 376.3 231 80.5
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 2.4e-102 375.9 238 79.0
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.4e-102 375.9 243 77.8
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 3.1e-102 375.6 233 80.3
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 9.0e-102 374.0 237 78.9
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 9.0e-102 374.0 233 79.0
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 2.0e-101 372.9 236 77.1
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 2.0e-101 372.9 228 78.9
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 2.6e-101 372.5 235 79.6
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 3.4e-101 372.1 235 76.2
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 4.5e-101 371.7 233 79.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.3e-100 370.2 231 77.9
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 2.2e-100 369.4 231 78.4
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 2.9e-100 369.0 236 78.0
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 3.8e-100 368.6 237 75.5
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 5.0e-100 368.2 241 73.9
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 5.0e-100 368.2 220 83.6
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 5.0e-100 368.2 241 75.5
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 6.5e-100 367.9 245 74.7
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.1e-99 367.1 241 75.1
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.4e-99 366.7 236 75.8
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.5e-99 365.9 241 75.1
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 4.2e-99 365.2 231 76.6
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 4.2e-99 365.2 231 76.2
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 7.2e-99 364.4 231 77.1
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 9.4e-99 364.0 246 72.4
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 9.4e-99 364.0 254 73.2
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 1.2e-98 363.6 241 73.9
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.2e-98 363.6 231 75.8
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 3.6e-98 362.1 231 75.3
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 4.6e-98 361.7 241 73.0
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 4.6e-98 361.7 242 75.6
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.0e-97 360.5 242 72.3
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.0e-97 360.5 242 72.3
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 2.3e-97 359.4 237 73.4
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 3.9e-97 358.6 231 74.5
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.1e-97 358.2 242 71.9
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 6.7e-97 357.8 231 74.0
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 6.7e-97 357.8 231 74.0
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 6.7e-97 357.8 220 78.2
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 1.1e-96 357.1 242 74.8
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.1e-96 357.1 264 70.8
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.5e-96 356.7 228 74.6
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 2.0e-96 356.3 241 73.0
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 5.7e-96 354.8 228 73.7
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.1e-94 348.6 239 71.1
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 9.1e-94 347.4 234 72.6
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.2e-93 347.1 232 73.3
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 4.5e-93 345.1 233 70.0
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.0e-92 341.7 234 74.4
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 4.2e-91 338.6 231 69.3
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 5.5e-91 338.2 231 73.6
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.4e-89 333.6 262 64.5
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 4.4e-88 328.6 241 67.2
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 3.7e-87 325.5 194 86.1
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 4.8e-87 325.1 202 80.2
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 8.2e-87 324.3 241 66.8
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.4e-86 322.8 241 66.4
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.0e-85 319.7 201 78.6
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 7.7e-85 317.8 231 69.3
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 5.0e-84 315.1 275 61.1
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 5.5e-83 311.6 263 61.2
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.8e-81 306.6 272 58.8
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.1e-78 297.4 194 75.8
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.1e-78 297.4 268 61.9
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 4.1e-78 295.4 234 61.1
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 5.9e-77 291.6 242 66.1
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.0e-76 290.8 220 63.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.9e-76 289.3 234 63.7
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 2.7e-74 282.7 191 73.3
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 3.6e-74 282.3 212 69.3
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 7.5e-72 274.6 178 75.3
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 7.7e-69 264.6 245 53.9
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.0e-68 264.2 307 49.8
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 5.5e-67 258.5 194 70.6
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.4e-62 243.8 220 53.6
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 4.5e-61 238.8 223 57.4
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 7.7e-61 238.0 153 71.2
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 2.3e-60 236.5 225 51.6
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 8.0e-58 228.0 165 66.7
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 8.0e-58 228.0 165 66.7
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 4.0e-57 225.7 179 63.1
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.4e-56 222.2 194 63.4
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.1e-54 217.6 221 47.1
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 5.0e-44 182.2 119 80.7
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 4.9e-39 165.6 128 66.4
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.2e-37 161.0 121 71.1
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 3.6e-34 149.4 163 52.1
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.7e-28 130.6 91 68.1
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.0e-28 129.8 93 73.1
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 2.5e-27 126.7 69 82.6
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.8e-25 120.6 61 90.2
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 4.4e-24 115.9 71 71.8
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 7.8e-21 105.1 66 74.2
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 3.4e-16 89.7 103 56.3
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 2.4e-14 83.6 152 32.9
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 6.0e-13 79.0 69 66.7
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 2.4e-09 67.0 65 49.2


User provided reference genes

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