Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 5.0e-235 817.4 409 100.0
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.6e-228 795.8 409 97.3
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 1.8e-216 755.7 409 92.2
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 6.8e-216 753.8 409 91.4
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 4.8e-214 747.7 409 90.7
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 3.3e-210 734.9 409 89.5
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.1e-165 587.0 406 71.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 6.6e-163 577.8 405 70.4
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 8.7e-163 577.4 402 69.4
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.4e-160 570.1 406 68.2
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 4.0e-160 568.5 405 69.9
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 6.9e-160 567.8 405 68.4
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 1.3e-158 563.5 402 68.9
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 7.1e-157 557.8 406 67.0
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 1.3e-155 553.5 402 66.9
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.8e-153 545.8 402 66.2
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.4e-152 543.5 406 65.5
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 3.8e-150 535.4 406 63.5
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 4.9e-150 535.0 378 70.1
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 6.4e-150 534.6 405 64.0
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 8.4e-150 534.3 407 62.9
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 8.4e-150 534.3 405 65.2
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 1.4e-149 533.5 402 65.7
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 4.2e-149 531.9 406 65.0
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 5.5e-149 531.6 402 63.2
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.6e-148 530.0 405 64.2
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.1e-148 529.6 406 63.3
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.0e-147 525.8 406 63.3
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 5.1e-147 525.0 477 57.2
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 6.7e-147 524.6 407 62.7
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 1.5e-146 523.5 407 62.2
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.9e-146 523.1 407 62.4
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 2.5e-146 522.7 408 61.5
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 3.3e-146 522.3 407 62.4
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 3.3e-146 522.3 405 63.5
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 4.3e-146 521.9 405 64.2
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 9.6e-146 520.8 406 61.3
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 3.7e-145 518.8 407 61.4
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 6.2e-145 518.1 407 62.2
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 6.2e-145 518.1 406 61.6
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 8.2e-145 517.7 402 61.9
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 8.2e-145 517.7 407 61.9
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.4e-144 516.9 406 62.3
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.8e-144 516.5 406 61.3
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 3.1e-144 515.8 406 62.8
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.1e-144 515.8 406 60.6
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 4.0e-144 515.4 402 61.7
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 6.9e-144 514.6 407 60.2
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.2e-143 513.8 406 62.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.5e-143 513.5 421 60.3
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.5e-143 513.5 401 64.1
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.5e-143 513.5 406 60.8
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 4.5e-143 511.9 409 61.6
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 5.8e-143 511.5 406 60.6
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.7e-142 510.0 403 61.5
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.2e-142 509.6 407 61.4
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.1e-141 507.3 402 60.9
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.9e-141 506.5 406 60.8
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 7.1e-141 504.6 402 60.4
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.2e-140 503.8 406 61.1
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.6e-140 503.4 406 60.6
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.7e-140 502.7 406 61.6
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.8e-139 500.0 406 58.6
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 3.9e-139 498.8 406 59.9
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 3.9e-139 498.8 376 66.0
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 3.3e-138 495.7 406 59.4
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.3e-138 495.4 402 59.7
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 4.3e-138 495.4 394 61.7
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.3e-137 493.8 407 60.4
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.3e-137 493.8 402 58.7
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 8.2e-137 491.1 426 57.3
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.4e-136 489.6 402 58.5
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.1e-136 489.2 406 57.6
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 6.9e-136 488.0 407 60.0
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.7e-134 483.4 380 61.1
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 9.4e-133 477.6 376 62.5
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 2.1e-132 476.5 407 57.2
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 3.0e-131 472.6 402 60.2
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 6.7e-131 471.5 432 57.2
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 2.2e-129 466.5 406 57.1
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 3.7e-129 465.7 374 61.0
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 3.7e-129 465.7 368 61.4
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 4.8e-129 465.3 406 56.7
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.8e-128 463.4 406 59.6
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 7.7e-127 458.0 368 58.4
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 2.2e-126 456.4 381 58.3
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 6.5e-126 454.9 411 54.5
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 3.6e-124 449.1 402 56.7
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 3.0e-123 446.0 364 59.1
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.0e-122 443.4 404 54.5
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.2e-121 439.9 409 53.8
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 2.4e-120 436.4 443 50.6
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.0e-118 431.0 353 59.5
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.2e-109 399.4 406 50.7
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.6e-108 397.1 296 67.2
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.3e-105 387.5 285 68.1
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.8e-97 359.8 409 47.2
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.9e-95 352.1 409 46.9
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.4e-91 340.9 406 43.3
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-87 327.4 302 53.6
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.0e-86 324.7 222 70.7
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 4.7e-84 315.8 419 41.3
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 4.9e-81 305.8 390 42.3
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 3.5e-79 299.7 402 40.5
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 4.3e-77 292.7 349 46.7
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.3e-70 271.2 251 58.6
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.8e-59 234.2 236 53.0
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 8.4e-57 225.3 176 61.9
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.3e-51 206.1 221 48.4
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.9e-48 197.6 458 33.6
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 9.6e-45 185.3 421 31.8
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.2e-31 141.7 111 60.4
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.9e-29 134.4 105 59.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.5e-29 134.0 116 56.9
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 3.7e-28 130.2 83 71.1
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 2.2e-25 120.9 82 65.9
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.9e-22 110.2 81 67.9
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.6e-20 104.8 81 58.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.1e-19 100.5 383 25.3
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 4.2e-16 90.1 90 47.8
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 7.2e-16 89.4 77 55.8
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 3.3e-13 80.5 75 53.3
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 2.2e-12 77.8 49 71.4
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.5e-10 71.6 53 60.4


User provided reference genes

Program Settings