Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.2e-127 459.9 239 100.0
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.4e-83 313.5 190 89.5
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.5e-82 310.1 190 87.4
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.0e-82 309.7 190 87.4
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 7.5e-82 307.8 190 86.8
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 3.1e-80 302.4 192 87.5
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 8.0e-68 261.2 192 77.1
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 2.0e-66 256.5 192 71.9
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.7e-65 253.4 196 73.5
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 4.9e-65 251.9 194 73.7
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.4e-64 250.4 193 73.1
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 4.1e-64 248.8 193 72.0
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 5.4e-64 248.4 197 75.1
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 7.8e-63 244.6 195 71.8
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 2.3e-62 243.0 195 68.7
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 3.9e-62 242.3 196 69.4
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 3.9e-62 242.3 196 69.4
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.1e-61 240.7 187 72.2
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.5e-61 239.6 197 70.6
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 5.6e-61 238.4 187 71.7
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 9.5e-61 237.7 192 67.2
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 1.2e-60 237.3 197 71.6
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 2.1e-60 236.5 190 70.0
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.4e-59 233.8 194 68.0
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.4e-59 233.8 194 68.0
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.4e-59 233.8 191 69.1
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 2.3e-59 233.0 192 66.7
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 8.9e-59 231.1 194 67.0
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.5e-58 230.3 197 65.5
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 5.8e-58 228.4 199 65.8
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 5.8e-58 228.4 194 66.5
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 5.8e-58 228.4 193 69.4
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 9.9e-58 227.6 194 66.0
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 2.2e-57 226.5 196 68.9
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 3.7e-57 225.7 190 68.4
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 4.9e-57 225.3 193 67.9
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 4.9e-57 225.3 194 66.5
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 4.9e-57 225.3 194 66.5
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 4.9e-57 225.3 194 66.0
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.4e-56 223.8 196 65.3
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.4e-56 223.8 194 64.9
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.9e-56 223.4 194 63.9
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 2.4e-56 223.0 190 66.3
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 1.2e-55 220.7 200 65.0
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.6e-55 220.3 192 66.7
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.1e-55 219.9 193 64.8
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 6.0e-55 218.4 194 67.0
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 7.8e-55 218.0 184 67.9
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.3e-54 217.2 194 64.4
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.7e-54 216.9 189 65.6
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 3.0e-54 216.1 195 64.6
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 8.6e-54 214.5 197 64.5
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 8.6e-54 214.5 194 64.9
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.5e-53 213.8 194 63.9
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.9e-53 213.4 196 63.8
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 5.6e-53 211.8 191 63.4
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 7.3e-53 211.5 185 68.1
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 7.3e-53 211.5 193 66.3
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 1.6e-52 210.3 189 64.0
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 3.6e-52 209.1 192 62.0
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 8.1e-52 208.0 215 60.0
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 8.1e-52 208.0 182 66.5
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.1e-51 207.6 200 60.5
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 8.9e-51 204.5 190 63.2
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 8.9e-51 204.5 190 63.7
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 8.9e-51 204.5 183 65.6
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.2e-50 204.1 191 61.3
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.0e-50 203.4 189 63.5
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.6e-50 203.0 174 67.8
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 4.4e-50 202.2 192 60.4
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 7.6e-50 201.4 199 62.8
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 9.9e-50 201.1 195 62.1
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 1.3e-49 200.7 195 62.1
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 2.2e-49 199.9 191 62.8
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 6.4e-49 198.4 192 59.9
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 6.4e-49 198.4 182 64.3
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 6.4e-49 198.4 196 59.2
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 6.4e-49 198.4 196 59.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 8.4e-49 198.0 180 65.6
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 1.1e-48 197.6 196 60.7
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.9e-48 196.8 197 62.4
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 5.4e-48 195.3 197 59.9
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 6.0e-47 191.8 196 58.7
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.0e-46 189.5 197 57.9
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 1.9e-45 186.8 177 59.9
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.5e-45 186.4 183 58.5
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 3.3e-45 186.0 193 57.5
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 7.3e-45 184.9 148 70.9
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 4.7e-44 182.2 171 59.6
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 4.0e-43 179.1 193 57.0
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 1.2e-42 177.6 149 67.1
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.5e-42 177.2 193 57.5
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 1.3e-41 174.1 198 54.0
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 2.9e-41 172.9 194 54.6
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 6.4e-41 171.8 189 55.0
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 8.4e-41 171.4 202 52.0
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 1.1e-40 171.0 196 53.1
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.7e-38 163.7 194 51.5
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 3.9e-38 162.5 189 51.9
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 5.1e-38 162.2 84 97.6
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 6.6e-38 161.8 188 51.6
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 3.3e-37 159.5 196 52.6
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 3.6e-36 156.0 209 46.9
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 3.6e-36 156.0 193 50.8
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 6.2e-36 155.2 196 50.5
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.1e-35 154.5 147 62.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 1.5e-34 150.6 185 49.2
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 9.9e-34 147.9 192 46.4
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.9e-33 146.4 189 50.3
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.9e-33 146.4 217 45.2
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 6.4e-33 145.2 189 47.6
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 6.4e-33 145.2 189 47.6
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 1.1e-32 144.4 128 68.8
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 7.1e-32 141.7 147 60.5
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 2.7e-31 139.8 202 43.6
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 1.3e-30 137.5 189 46.0
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 7.4e-29 131.7 191 47.6
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 9.6e-29 131.3 81 88.9
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 3.7e-28 129.4 83 79.5
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.4e-27 126.7 83 77.1
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 2.0e-26 123.6 84 78.6
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 2.6e-26 123.2 165 46.7
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.7e-25 120.6 142 53.5
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.2e-23 114.4 150 51.3
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 2.1e-23 113.6 151 49.7
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 3.9e-22 109.4 109 57.8
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.1e-22 109.0 123 59.3
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 1.5e-21 107.5 79 69.6
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.3e-20 104.4 78 73.1
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 2.4e-19 100.1 59 88.1
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 5.3e-19 99.0 160 44.4
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 6.5e-17 92.0 97 53.6
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 3.2e-16 89.7 57 86.0
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 5.5e-16 89.0 83 60.2
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 7.9e-15 85.1 91 51.6
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 7.9e-15 85.1 108 49.1
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-14 83.6 130 43.1
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 6.3e-12 75.5 181 33.7
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 2.6e-10 70.1 78 57.7


User provided reference genes

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