Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.3e-243 845.1 414 100.0
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 5.8e-239 830.5 413 97.8
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 9.2e-229 796.6 413 92.7
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 6.0e-228 793.9 413 92.5
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 3.3e-226 788.1 414 92.0
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.5e-223 779.2 413 90.6
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 3.4e-223 778.1 413 91.8
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 3.3e-202 708.4 413 80.9
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 4.2e-197 691.4 412 79.9
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 7.1e-197 690.6 412 79.6
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.6e-193 679.5 417 76.7
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 5.5e-189 664.5 481 68.4
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 1.2e-183 646.7 423 73.8
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 5.8e-183 644.4 409 75.1
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 5.0e-182 641.3 478 67.6
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 3.5e-180 635.2 417 72.9
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.9e-178 629.4 410 72.7
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 4.8e-177 624.8 413 71.4
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 4.2e-173 611.7 415 68.9
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 9.4e-173 610.5 414 69.3
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 1.4e-171 606.7 412 69.7
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.5e-170 602.4 413 69.0
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 2.5e-170 602.4 412 69.7
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 4.3e-170 601.7 440 65.5
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 8.2e-169 597.4 417 68.6
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.4e-168 596.7 425 66.8
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 1.8e-168 596.3 415 68.4
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 5.3e-168 594.7 431 65.7
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 9.1e-168 594.0 430 69.3
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 2.0e-167 592.8 431 65.4
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 2.6e-167 592.4 410 67.8
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 1.0e-166 590.5 421 66.5
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.2e-164 583.6 421 66.5
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 2.1e-164 582.8 429 66.7
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 2.3e-163 579.3 411 66.7
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 6.7e-163 577.8 418 64.4
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 4.4e-162 575.1 412 66.7
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 5.7e-162 574.7 429 62.7
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.1e-160 570.5 371 72.8
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 9.1e-160 567.4 414 64.5
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 3.5e-159 565.5 454 60.8
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.0e-158 563.9 411 64.5
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 1.0e-158 563.9 415 66.3
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 5.0e-158 561.6 418 62.9
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 8.5e-158 560.8 413 64.4
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 7.2e-157 557.8 417 63.5
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 4.7e-156 555.1 413 63.7
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 4.7e-156 555.1 413 63.7
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 6.1e-156 554.7 416 63.5
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 1.0e-155 553.9 413 63.7
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.0e-155 553.9 422 62.1
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 1.8e-155 553.1 414 63.3
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 4.0e-155 552.0 338 78.1
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 6.7e-155 551.2 417 62.8
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.1e-154 550.4 413 64.4
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-154 550.4 425 63.1
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 2.0e-154 549.7 413 63.2
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 2.0e-154 549.7 413 63.2
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 5.7e-154 548.1 446 60.8
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 9.7e-154 547.4 412 63.1
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 4.8e-153 545.0 436 61.0
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 6.3e-153 544.7 412 62.6
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.1e-152 543.9 412 62.9
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 2.4e-152 542.7 412 62.4
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.0e-150 537.3 410 62.7
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 2.9e-150 535.8 415 61.0
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 1.1e-149 533.9 412 62.6
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 3.0e-147 525.8 419 59.9
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.7e-146 521.5 415 61.0
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 3.7e-145 518.8 415 59.5
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 2.2e-142 509.6 434 56.2
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 2.7e-140 502.7 412 57.8
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.0e-139 500.7 408 59.1
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.0e-138 496.5 408 58.6
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.3e-137 493.8 408 58.3
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.5e-133 480.3 410 56.8
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 1.5e-133 480.3 416 56.7
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.0e-131 474.2 392 57.9
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 5.4e-128 461.8 408 54.7
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 7.0e-128 461.5 347 62.0
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.6e-127 460.3 410 55.4
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-127 459.5 411 56.0
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-127 459.5 411 56.0
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.3e-123 446.4 447 54.6
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.6e-119 433.7 422 49.3
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.7e-118 430.3 337 63.5
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.6e-116 423.7 334 62.0
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 1.2e-108 397.5 433 46.9
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 2.9e-105 386.3 427 45.0
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.3e-102 377.5 412 46.1
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 3.6e-100 369.4 493 41.0
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.1e-96 357.8 249 68.3
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 3.2e-96 356.3 217 79.3
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 3.6e-92 342.8 206 78.6
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.2e-81 307.0 386 41.7
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.8e-75 287.3 181 70.2
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 4.2e-72 276.2 177 71.2
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 1.6e-63 247.7 177 65.5
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.6e-63 247.7 177 61.0
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.1e-53 214.9 158 62.7
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 7.9e-47 192.2 137 58.4
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 5.7e-45 186.0 103 84.5
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 4.8e-44 183.0 106 79.2
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-43 181.4 182 54.9
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 5.3e-43 179.5 182 54.4
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 5.3e-43 179.5 182 54.9
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 7.7e-42 175.6 145 62.8
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 1.2e-39 168.3 152 52.0
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 8.0e-39 165.6 125 60.8
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.0e-39 165.6 117 65.0
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.0e-38 163.7 117 65.0
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 5.3e-35 152.9 125 63.2
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.7e-33 147.9 120 58.3
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 2.2e-33 147.5 82 81.7
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 9.4e-32 142.1 88 73.9
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.4e-27 127.5 81 65.4
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 3.1e-27 127.1 72 77.8
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 7.0e-27 125.9 86 69.8
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.7e-26 122.5 108 50.0
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 1.2e-23 115.2 83 62.7
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 5.2e-22 109.8 90 53.3
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 1.2e-21 108.6 119 50.4
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 2.8e-20 104.0 58 74.1
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 6.3e-20 102.8 60 70.0
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 5.2e-14 83.2 171 30.4
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 6.8e-14 82.8 81 49.4
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.0e-13 81.3 53 66.0
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 4.9e-12 76.6 51 64.7
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 4.6e-10 70.1 55 58.2
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.3e-09 67.8 37 73.0
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 5.0e-09 66.6 42 66.7
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 1.1e-08 65.5 42 71.4
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 1.1e-08 65.5 42 66.7
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 4.7e-07 60.1 100 37.0
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 1.8e-06 58.2 100 36.0


User provided reference genes

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