Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000011g0140 Nicotiana tabacum HOM05D003986 ORTHO05D004916 3.4e-158 561.6 284 100.0
Nitab4.5_0004735g0050 Nicotiana tabacum HOM05D003986 ORTHO05D004916 2.9e-141 505.4 307 86.6
Peaxi162Scf00937g00119 Petunia axillaris HOM05D003986 ORTHO05D004916 1.0e-117 427.2 237 90.7
Solyc05g017890.4 Solanum lycopersicum HOM05D003986 ORTHO05D004916 2.3e-114 416.0 238 90.3
Sopen05g014610 Solanum pennellii HOM05D003986 ORTHO05D004916 2.3e-114 416.0 238 90.3
CAN.G206.116 Capsicum annuum HOM05D003986 ORTHO05D004916 3.1e-111 405.6 238 88.7
Oeu006345.3 Olea europaea HOM05D003986 ORTHO05D004916 1.8e-98 363.2 239 78.2
Migut.E00504 Erythranthe guttata HOM05D003986 ORTHO05D004916 4.9e-96 355.1 239 76.6
Dinv14386 Davidia involucrata HOM05D003986 ORTHO05D004916 6.4e-96 354.8 239 76.2
CSS0009129 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 4.1e-95 352.1 239 77.8
CSS0026713 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 4.1e-95 352.1 239 77.8
QL03p038358 Quercus lobata HOM05D003986 ORTHO05D004916 1.2e-94 350.5 239 76.2
COL.COLO4_06656 Corchorus olitorius HOM05D003986 ORTHO05D004916 3.5e-94 349.0 239 74.5
arahy.Tifrunner.gnm1.ann1.R76IPR Arachis hypogaea HOM05D003986 ORTHO05D004916 1.0e-93 347.4 239 76.2
Dinv11756 Davidia involucrata HOM05D003986 ORTHO05D004916 1.0e-93 347.4 239 74.9
Lj3C862T8 Lonicera japonica HOM05D003986 ORTHO05D004916 1.0e-93 347.4 237 75.5
arahy.Tifrunner.gnm1.ann1.374THF Arachis hypogaea HOM05D003986 ORTHO05D004916 3.0e-93 345.9 239 75.7
Lj4g0022556 Lotus japonicus HOM05D003986 ORTHO05D004916 5.0e-93 345.1 239 75.3
Thecc.02G306600 Theobroma cacao HOM05D003986 ORTHO05D004916 5.0e-93 345.1 239 75.3
GSVIVG01011619001 Vitis vinifera HOM05D003986 ORTHO05D004916 8.6e-93 344.4 238 74.4
Atru.chr11.800 Acer truncatum HOM05D003986 ORTHO05D004916 1.1e-92 344.0 239 73.6
CiPaw.06G055800 Carya illinoinensis HOM05D003986 ORTHO05D004916 1.1e-92 344.0 239 73.2
Medtr8g106090 Medicago truncatula HOM05D003986 ORTHO05D004916 1.1e-92 344.0 239 73.6
Gorai.005G152800 Gossypium raimondii HOM05D003986 ORTHO05D004916 1.9e-92 343.2 237 72.2
MSTRG.2114 Avicennia marina HOM05D003986 ORTHO05D004916 2.5e-92 342.8 239 74.9
Gohir.A03G112200 Gossypium hirsutum HOM05D003986 ORTHO05D004916 3.3e-92 342.4 237 72.2
Actinidia12415 Actinidia chinensis HOM05D003986 ORTHO05D004916 7.3e-92 341.3 239 74.9
Ciclev10017843m.g Citrus clementina HOM05D003986 ORTHO05D004916 1.2e-91 340.5 239 73.2
Gohir.D02G136832 Gossypium hirsutum HOM05D003986 ORTHO05D004916 1.6e-91 340.1 237 71.7
Manes.17G086100 Manihot esculenta HOM05D003986 ORTHO05D004916 3.6e-91 339.0 239 73.2
TPR.G12867 Trifolium pratense HOM05D003986 ORTHO05D004916 3.6e-91 339.0 239 73.6
MD09G1258800 Malus domestica HOM05D003986 ORTHO05D004916 4.7e-91 338.6 239 74.9
Psat7g004480 Pisum sativum HOM05D003986 ORTHO05D004916 4.7e-91 338.6 239 73.6
Aqoxy3G04028 Aquilegia oxysepala HOM05D003986 ORTHO05D004916 6.2e-91 338.2 240 72.5
Lsat_1_v5_gn_3_102381 Lactuca sativa HOM05D003986 ORTHO05D004916 6.2e-91 338.2 238 73.5
Lalb_Chr05g0222051 Lupinus albus HOM05D003986 ORTHO05D004916 6.2e-91 338.2 239 74.1
Glyma.05G241400 Glycine max HOM05D003986 ORTHO05D004916 1.0e-90 337.4 239 73.6
Prupe.3G150800 Prunus persica HOM05D003986 ORTHO05D004916 1.0e-90 337.4 239 73.6
TAR629G0821 Trochodendron aralioides HOM05D003986 ORTHO05D004916 1.4e-90 337.0 240 72.5
Glyma.08G048400 Glycine max HOM05D003986 ORTHO05D004916 3.1e-90 335.9 239 73.2
Lalb_Chr16g0387401 Lupinus albus HOM05D003986 ORTHO05D004916 8.9e-90 334.3 239 72.4
VMungo0251G0132 Vigna mungo HOM05D003986 ORTHO05D004916 1.5e-89 333.6 240 73.3
Sabra19G0063600 Salix brachista HOM05D003986 ORTHO05D004916 2.6e-89 332.8 239 70.3
SGA_v2.0_scaffold3G01767 Striga asiatica HOM05D003986 ORTHO05D004916 2.6e-89 332.8 239 72.8
ClCG01G006690 Citrullus lanatus HOM05D003986 ORTHO05D004916 4.4e-89 332.0 240 72.1
Potri.019G054600 Populus trichocarpa HOM05D003986 ORTHO05D004916 5.8e-89 331.6 239 70.3
Nn4g24477 Nelumbo nucifera HOM05D003986 ORTHO05D004916 7.5e-89 331.3 239 70.7
MELO3C005265.2 Cucumis melo HOM05D003986 ORTHO05D004916 9.8e-89 330.9 240 72.1
Phvul.002G324500 Phaseolus vulgaris HOM05D003986 ORTHO05D004916 9.8e-89 330.9 240 72.5
Cpa.g.sc2.149 Carica papaya HOM05D003986 ORTHO05D004916 1.7e-88 330.1 237 72.6
CsaV3_5G027880 Cucumis sativus L. HOM05D003986 ORTHO05D004916 1.7e-88 330.1 240 72.1
PGR142G4089 Punica granatum HOM05D003986 ORTHO05D004916 2.2e-88 329.7 239 71.1
CANSAT78G0669 Cannabis sativa HOM05D003986 ORTHO05D004916 2.9e-88 329.3 239 72.4
Medtr7g117220 Medicago truncatula HOM05D003986 ORTHO05D004916 2.9e-88 329.3 238 71.4
TWI74G0603 Tripterygium wilfordii HOM05D003986 ORTHO05D004916 3.7e-88 328.9 239 71.5
Hund24923 Selenicereus undatus HOM05D003986 ORTHO05D004916 6.4e-88 328.2 238 71.8
HanXRQChr12g0381871 Helianthus annuus HOM05D003986 ORTHO05D004916 1.1e-87 327.4 237 73.0
DCAR_026811 Daucus carota HOM05D003986 ORTHO05D004916 2.4e-87 326.2 239 70.7
Sc14g0006590 Simmondsia chinensis HOM05D003986 ORTHO05D004916 2.4e-87 326.2 238 71.0
Potri.013G085000 Populus trichocarpa HOM05D003986 ORTHO05D004916 3.2e-87 325.9 239 69.5
AUR62014146 Chenopodium quinoa HOM05D003986 ORTHO05D004916 1.0e-85 320.9 237 71.3
ECA246G1343 Erigeron canadensis HOM05D003986 ORTHO05D004916 1.7e-85 320.1 237 71.3
Eucgr.B02697 Eucalyptus grandis HOM05D003986 ORTHO05D004916 3.9e-85 318.9 237 70.5
Sabra13G0078400 Salix brachista HOM05D003986 ORTHO05D004916 3.9e-85 318.9 239 69.9
unitig_8.g4016 Utricularia gibba HOM05D003986 ORTHO05D004916 3.9e-85 318.9 216 75.0
AUR62038486 Chenopodium quinoa HOM05D003986 ORTHO05D004916 6.6e-85 318.2 237 70.9
RcHm_v2.0_Chr4g0442311 Rosa chinensis HOM05D003986 ORTHO05D004916 1.9e-84 316.6 246 69.1
EL10Ac6g14201 Beta vulgaris HOM05D003986 ORTHO05D004916 9.5e-84 314.3 239 69.0
Sed0014719 Sechium edule HOM05D003986 ORTHO05D004916 9.5e-84 314.3 243 69.1
PSO063G2585 Papaver somniferum HOM05D003986 ORTHO05D004916 6.8e-82 308.1 240 67.5
PSO782G5475 Papaver somniferum HOM05D003986 ORTHO05D004916 6.8e-82 308.1 240 67.5
AT1G24706 Arabidopsis thaliana HOM05D003986 ORTHO05D004916 1.2e-81 307.4 237 66.7
THA.LOC104825570 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 1.2e-81 307.4 238 67.2
ATR0021G052 Amborella trichopoda HOM05D003986 ORTHO05D004916 1.5e-81 307.0 239 66.9
FvH4_4g33200 Fragaria vesca HOM05D003986 ORTHO05D004916 1.5e-81 307.0 245 67.8
Ah.02g127910 Amaranthus hybridus HOM05D003986 ORTHO05D004916 2.0e-81 306.6 237 68.8
Carub.0001s2544 Capsella rubella HOM05D003986 ORTHO05D004916 2.0e-81 306.6 237 67.1
FAN12G0920 Fragaria x ananassa HOM05D003986 ORTHO05D004916 2.6e-81 306.2 245 67.3
FAN22G0296 Fragaria x ananassa HOM05D003986 ORTHO05D004916 5.8e-81 305.1 245 67.3
THA.LOC104807876 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 5.8e-81 305.1 239 66.9
FAN07G2168 Fragaria x ananassa HOM05D003986 ORTHO05D004916 2.2e-80 303.1 245 66.9
FAN17G2354 Fragaria x ananassa HOM05D003986 ORTHO05D004916 2.9e-80 302.8 245 66.9
AL1G40240 Arabidopsis lyrata HOM05D003986 ORTHO05D004916 8.3e-80 301.2 237 66.2
CARHR026420 Cardamine hirsuta HOM05D003986 ORTHO05D004916 1.4e-79 300.4 237 65.8
Aa31LG7G9380 Aethionema arabicum HOM05D003986 ORTHO05D004916 2.4e-79 299.7 237 65.8
Thhalv10006540m.g Eutrema salsugineum HOM05D003986 ORTHO05D004916 9.2e-79 297.7 238 66.8
Sp1g23110 Schrenkiella parvula HOM05D003986 ORTHO05D004916 2.1e-78 296.6 237 65.8
Ca_17244_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 5.1e-77 292.0 239 66.9
Ca_29522_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 5.1e-77 292.0 239 66.9
HPP92_004743 Vanilla planifolia HOM05D003986 ORTHO05D004916 1.9e-76 290.0 240 64.2
Mapoly0001s0369 Marchantia polymorpha HOM05D003986 ORTHO05D004916 4.3e-76 288.9 243 63.4
CDE05G3646 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 9.5e-76 287.7 237 65.4
C03p73260 Brassica napus HOM05D003986 ORTHO05D004916 1.8e-74 283.5 237 65.8
BolC3t19622H Brassica oleracea HOM05D003986 ORTHO05D004916 1.8e-74 283.5 237 65.8
A08p26750 Brassica napus HOM05D003986 ORTHO05D004916 6.8e-74 281.6 237 65.4
BraA08t34620Z Brassica rapa HOM05D003986 ORTHO05D004916 6.8e-74 281.6 237 65.4
AagrBONN_evm.TU.Sc2ySwM_117.1912 Anthoceros agrestis HOM05D003986 ORTHO05D004916 4.4e-73 278.9 199 70.9
Haze_08333 Corylus avellana HOM05D003986 ORTHO05D004916 4.4e-73 278.9 239 64.0
Pp3c11_17570 Physcomitrium patens HOM05D003986 ORTHO05D004916 1.3e-72 277.3 237 64.6
SMO145G0041 Selaginella moellendorffii HOM05D003986 ORTHO05D004916 4.1e-71 272.3 237 63.3
SHI04403 Sapria himalayana HOM05D003986 ORTHO05D004916 3.9e-69 265.8 238 61.3
BcaB03g12045 Brassica carinata HOM05D003986 ORTHO05D004916 1.9e-68 263.5 236 61.4
Zm00001eb156750 Zea mays HOM05D003986 ORTHO05D004916 4.7e-67 258.8 237 60.8
CBR_g39719 Chara braunii HOM05D003986 ORTHO05D004916 5.4e-63 245.4 248 53.2
Os01g0916800 Oryza sativa ssp. japonica HOM05D003986 ORTHO05D004916 4.4e-57 225.7 190 64.2
TAR371G0322 Trochodendron aralioides HOM05D003986 ORTHO05D004916 3.4e-49 199.5 211 54.0
Lsat_1_v5_gn_3_86221 Lactuca sativa HOM05D003986 ORTHO05D004916 9.6e-44 181.4 166 60.2
Rhsim04G0143700 Rhododendron simsii HOM05D003986 ORTHO05D004916 9.0e-42 174.9 229 51.1
MCO13G375 Micromonas commoda HOM05D003986 ORTHO05D004916 8.5e-32 141.7 201 39.8
PRCOL_00006124 Prasinoderma coloniale HOM05D003986 ORTHO05D004916 4.6e-22 109.4 196 34.7
Cre12.g507700 Chlamydomonas reinhardtii HOM05D003986 ORTHO05D004916 4.8e-19 99.4 133 39.8
Rhsim04G0125900 Rhododendron simsii HOM05D003986 ORTHO05D004916 6.1e-14 82.4 180 35.0
BcaB05g22549 Brassica carinata HOM05D003986 ORTHO05D004916 1.4e-13 81.3 79 55.7
Cfa024658 Carpinus fangiana HOM05D003986 ORTHO05D004916 4.4e-12 76.3 118 32.2
COL.COLO4_04151 Corchorus olitorius HOM05D003986 ORTHO05D004916 2.2e-11 73.9 70 55.7


User provided reference genes

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