Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000009g0430 Nicotiana tabacum HOM05D005117 ORTHO05D005956 0.0e+00 1223.4 612 100.0
Nitab4.5_0001489g0010 Nicotiana tabacum HOM05D005117 ORTHO05D005956 0.0e+00 1176.4 612 96.1
Sopen11g020570 Solanum pennellii HOM05D005117 ORTHO05D005956 0.0e+00 1083.9 612 88.1
Solyc11g045120.3 Solanum lycopersicum HOM05D005117 ORTHO05D005956 0.0e+00 1075.8 612 87.4
PGSC0003DMG401019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 4.2e-312 1074.7 612 87.7
CAN.G75.10 Capsicum annuum HOM05D005117 ORTHO05D005956 7.8e-309 1063.1 612 86.6
Peaxi162Scf00078g01021 Petunia axillaris HOM05D005117 ORTHO05D005956 5.6e-299 1030.4 604 85.9
CSS0010464 Camellia sinensis var. sinensis HOM05D005117 ORTHO05D005956 2.9e-255 885.2 613 71.8
Dinv22143 Davidia involucrata HOM05D005117 ORTHO05D005956 5.5e-254 880.9 613 72.1
Cc10_g16050 Coffea canephora HOM05D005117 ORTHO05D005956 2.1e-253 879.0 614 72.5
Migut.C01395 Erythranthe guttata HOM05D005117 ORTHO05D005956 4.8e-250 867.8 613 72.1
Cpa.g.sc142.12 Carica papaya HOM05D005117 ORTHO05D005956 2.4e-249 865.5 615 71.2
SalBow7G0613 Salvia bowleyana HOM05D005117 ORTHO05D005956 4.1e-249 864.8 595 73.3
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 4.1e-249 864.8 615 69.9
GSVIVG01037192001 Vitis vinifera HOM05D005117 ORTHO05D005956 6.9e-249 864.0 614 70.4
MSTRG.25503 Avicennia marina HOM05D005117 ORTHO05D005956 1.2e-248 863.2 613 71.5
arahy.Tifrunner.gnm1.ann1.T5KNPK Arachis hypogaea HOM05D005117 ORTHO05D005956 2.2e-247 859.0 626 69.3
MBI06_g32153_MAGBIO Magnolia biondii HOM05D005117 ORTHO05D005956 8.5e-247 857.1 618 69.7
Lj9A696G55 Lonicera japonica HOM05D005117 ORTHO05D005956 1.1e-246 856.7 632 69.6
Ciclev10019359m.g Citrus clementina HOM05D005117 ORTHO05D005956 1.9e-246 855.9 612 70.6
CiPaw.03G013100 Carya illinoinensis HOM05D005117 ORTHO05D005956 1.6e-245 852.8 615 69.8
Lj3g0005068 Lotus japonicus HOM05D005117 ORTHO05D005956 3.6e-245 851.7 614 69.1
Phvul.011G215800 Phaseolus vulgaris HOM05D005117 ORTHO05D005956 4.7e-245 851.3 616 69.6
Hma1.2p1_0016F.1_g010920 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 6.1e-245 850.9 611 70.4
MD10G1002600 Malus domestica HOM05D005117 ORTHO05D005956 7.9e-245 850.5 618 70.2
Lalb_Chr03g0033811 Lupinus albus HOM05D005117 ORTHO05D005956 2.3e-244 849.0 617 69.5
Psat7g227480 Pisum sativum HOM05D005117 ORTHO05D005956 3.9e-244 848.2 619 70.6
Thecc.08G180900 Theobroma cacao HOM05D005117 ORTHO05D005956 5.1e-244 847.8 615 69.4
VMungo1127G0019 Vigna mungo HOM05D005117 ORTHO05D005956 2.0e-243 845.9 618 69.4
Actinidia23299 Actinidia chinensis HOM05D005117 ORTHO05D005956 2.6e-243 845.5 613 68.2
Ca_13614_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 9.7e-243 843.6 616 69.2
QL09p001419 Quercus lobata HOM05D005117 ORTHO05D005956 9.7e-243 843.6 621 69.4
RcHm_v2.0_Chr6g0250391 Rosa chinensis HOM05D005117 ORTHO05D005956 2.8e-242 842.0 614 68.6
arahy.Tifrunner.gnm1.ann1.H62643 Arachis hypogaea HOM05D005117 ORTHO05D005956 4.8e-242 841.3 616 69.3
Rhsim12G0002100 Rhododendron simsii HOM05D005117 ORTHO05D005956 1.4e-241 839.7 690 63.2
TPR.G34118 Trifolium pratense HOM05D005117 ORTHO05D005956 2.4e-241 839.0 621 69.9
Potri.013G096600 Populus trichocarpa HOM05D005117 ORTHO05D005956 9.1e-241 837.0 617 68.6
COL.COLO4_25130 Corchorus olitorius HOM05D005117 ORTHO05D005956 1.6e-240 836.3 614 67.8
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 2.0e-240 835.9 615 68.3
ClCG11G008340 Citrullus lanatus HOM05D005117 ORTHO05D005956 2.6e-240 835.5 619 68.2
Medtr4g030200 Medicago truncatula HOM05D005117 ORTHO05D005956 2.6e-240 835.5 613 69.7
Thhalv10018306m.g Eutrema salsugineum HOM05D005117 ORTHO05D005956 5.9e-240 834.3 614 67.9
FAN20G0498 Fragaria x ananassa HOM05D005117 ORTHO05D005956 1.7e-239 832.8 618 68.3
HanXRQChr12g0369271 Helianthus annuus HOM05D005117 ORTHO05D005956 2.9e-239 832.0 613 70.1
FvH4_2g00430 Fragaria vesca HOM05D005117 ORTHO05D005956 1.9e-238 829.3 618 68.1
CsaV3_2G033280 Cucumis sativus L. HOM05D005117 ORTHO05D005956 4.2e-238 828.2 620 67.4
EL10Ac1g01281 Beta vulgaris HOM05D005117 ORTHO05D005956 5.5e-238 827.8 615 68.0
Gohir.D08G250900 Gossypium hirsutum HOM05D005117 ORTHO05D005956 2.1e-237 825.9 615 67.6
Gorai.004G267600 Gossypium raimondii HOM05D005117 ORTHO05D005956 2.1e-237 825.9 615 67.6
CANSAT21G1171 Cannabis sativa HOM05D005117 ORTHO05D005956 3.6e-237 825.1 613 68.4
Gohir.A08G230500 Gossypium hirsutum HOM05D005117 ORTHO05D005956 4.7e-237 824.7 615 67.5
Sp5g26520 Schrenkiella parvula HOM05D005117 ORTHO05D005956 6.1e-237 824.3 613 67.0
THA.LOC104810302 Tarenaya hassleriana HOM05D005117 ORTHO05D005956 5.2e-236 821.2 615 67.3
ECA247G0677 Erigeron canadensis HOM05D005117 ORTHO05D005956 6.7e-236 820.8 612 67.3
BcaC08g46567 Brassica carinata HOM05D005117 ORTHO05D005956 7.5e-235 817.4 615 66.8
C06p45410 Brassica napus HOM05D005117 ORTHO05D005956 7.5e-235 817.4 615 66.7
A07p37640 Brassica napus HOM05D005117 ORTHO05D005956 1.3e-234 816.6 614 66.1
BolC6t39599H Brassica oleracea HOM05D005117 ORTHO05D005956 1.7e-234 816.2 615 66.8
BcaB03g14892 Brassica carinata HOM05D005117 ORTHO05D005956 3.7e-234 815.1 613 66.2
AL2G31010 Arabidopsis lyrata HOM05D005117 ORTHO05D005956 4.8e-234 814.7 614 66.3
PSO170G3068 Papaver somniferum HOM05D005117 ORTHO05D005956 4.8e-234 814.7 615 68.1
BraA07t31328Z Brassica rapa HOM05D005117 ORTHO05D005956 1.1e-233 813.5 615 66.5
PSO017G2614 Papaver somniferum HOM05D005117 ORTHO05D005956 1.1e-233 813.5 615 68.0
Carub.0002s1821 Capsella rubella HOM05D005117 ORTHO05D005956 1.8e-233 812.8 615 65.9
Aa31LG4G9190 Aethionema arabicum HOM05D005117 ORTHO05D005956 1.2e-232 810.1 614 67.1
Aqoxy5G01861 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 1.6e-232 809.7 615 68.0
Sed0010084 Sechium edule HOM05D005117 ORTHO05D005956 2.9e-231 805.4 616 65.6
AT1G71350 Arabidopsis thaliana HOM05D005117 ORTHO05D005956 3.8e-231 805.1 614 65.5
Os02g0557600 Oryza sativa ssp. japonica HOM05D005117 ORTHO05D005956 3.2e-230 802.0 615 66.2
Sc06g0000080 Simmondsia chinensis HOM05D005117 ORTHO05D005956 3.2e-230 802.0 618 66.8
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 5.5e-230 801.2 599 68.9
CARHR064630 Cardamine hirsuta HOM05D005117 ORTHO05D005956 7.2e-230 800.8 613 65.1
PGR004G2811 Punica granatum HOM05D005117 ORTHO05D005956 1.6e-229 799.7 615 66.3
Hund26940 Selenicereus undatus HOM05D005117 ORTHO05D005956 2.6e-227 792.3 610 66.7
ATR1089G036 Amborella trichopoda HOM05D005117 ORTHO05D005956 1.3e-226 790.0 609 66.0
Ah.05g170440 Amaranthus hybridus HOM05D005117 ORTHO05D005956 2.4e-225 785.8 612 65.7
Glyma.09G001900 Glycine max HOM05D005117 ORTHO05D005956 1.1e-222 776.9 570 68.2
Sabra13G0082800 Salix brachista HOM05D005117 ORTHO05D005956 5.5e-222 774.6 744 56.5
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 9.5e-222 773.9 598 66.6
Zm00001eb243900 Zea mays HOM05D005117 ORTHO05D005956 1.6e-221 773.1 616 64.0
Eucgr.A01322 Eucalyptus grandis HOM05D005117 ORTHO05D005956 2.3e-220 769.2 567 68.3
HPP92_019136 Vanilla planifolia HOM05D005117 ORTHO05D005956 3.0e-220 768.8 619 62.8
HPP92_019134 Vanilla planifolia HOM05D005117 ORTHO05D005956 5.2e-220 768.1 616 63.3
Duzib093G1290 Durio zibethinus HOM05D005117 ORTHO05D005956 4.1e-217 758.4 577 67.6
Glyma.12G241600 Glycine max HOM05D005117 ORTHO05D005956 3.8e-215 751.9 547 69.1
MELO3C008099.2 Cucumis melo HOM05D005117 ORTHO05D005956 1.2e-211 740.3 551 68.1
CDE05G1166 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 2.9e-202 709.1 615 58.4
Aqoxy5G01859 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 7.1e-193 677.9 617 59.6
SMO364G0365 Selaginella moellendorffii HOM05D005117 ORTHO05D005956 1.7e-191 673.3 625 55.4
unitig_37.g13073 Utricularia gibba HOM05D005117 ORTHO05D005956 3.9e-191 672.2 612 59.3
Prupe.8G004200 Prunus persica HOM05D005117 ORTHO05D005956 1.4e-185 653.7 501 67.7
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 4.3e-174 615.5 679 50.1
vmacro00946 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 3.6e-173 612.5 685 51.5
SEGI_03298 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 2.0e-171 606.7 527 61.5
vmacro00947 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 6.0e-160 568.5 492 61.8
AagrBONN_evm.TU.Sc2ySwM_340.48 Anthoceros agrestis HOM05D005117 ORTHO05D005956 1.9e-153 547.0 504 56.7
Hma1.2p1_0016F.1_g010930 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 2.1e-144 516.9 363 71.6
Atru.chr13.2570 Acer truncatum HOM05D005117 ORTHO05D005956 6.7e-143 511.9 387 65.6
RcHm_v2.0_Chr6g0249701 Rosa chinensis HOM05D005117 ORTHO05D005956 1.5e-139 500.7 384 66.1
TAR381G0825 Trochodendron aralioides HOM05D005117 ORTHO05D005956 7.2e-129 465.3 360 66.4
Haze_13981 Corylus avellana HOM05D005117 ORTHO05D005956 2.6e-118 430.3 361 62.0
SGA_v2.0_scaffold443G51687 Striga asiatica HOM05D005117 ORTHO05D005956 1.3e-117 427.9 321 67.3
SHI04053 Sapria himalayana HOM05D005117 ORTHO05D005956 6.3e-117 425.6 438 54.3
PGSC0003DMG402019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 5.5e-113 412.5 232 89.2
Ca_30189_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 1.8e-111 407.5 257 78.6
Cre06.g303650 Chlamydomonas reinhardtii HOM05D005117 ORTHO05D005956 4.8e-109 399.4 645 38.0
RcHm_v2.0_Chr6g0250211 Rosa chinensis HOM05D005117 ORTHO05D005956 4.8e-109 399.4 387 56.3
Haze_13982 Corylus avellana HOM05D005117 ORTHO05D005956 1.4e-108 397.9 257 76.3
vmacro00948 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 1.3e-101 374.8 256 71.9
Atru.chr13.2543 Acer truncatum HOM05D005117 ORTHO05D005956 2.1e-96 357.5 244 70.1
MCO13G430 Micromonas commoda HOM05D005117 ORTHO05D005956 8.3e-85 318.9 631 35.7
Atru.chr13.2569 Acer truncatum HOM05D005117 ORTHO05D005956 5.1e-74 283.1 179 74.3
RcHm_v2.0_Chr6g0249901 Rosa chinensis HOM05D005117 ORTHO05D005956 7.3e-57 226.1 220 55.9
PSO541G0924 Papaver somniferum HOM05D005117 ORTHO05D005956 8.1e-56 222.6 169 68.6
RcHm_v2.0_Chr6g0250191 Rosa chinensis HOM05D005117 ORTHO05D005956 1.7e-53 214.9 221 53.8
Zm00001eb084470 Zea mays HOM05D005117 ORTHO05D005956 2.6e-46 191.0 159 59.7
FAN24G1044 Fragaria x ananassa HOM05D005117 ORTHO05D005956 2.2e-45 188.0 111 82.0
RcHm_v2.0_Chr6g0249891 Rosa chinensis HOM05D005117 ORTHO05D005956 4.9e-45 186.8 111 82.9
AUR62038541 Chenopodium quinoa HOM05D005117 ORTHO05D005956 8.4e-45 186.0 110 81.8
RcHm_v2.0_Chr6g0250171 Rosa chinensis HOM05D005117 ORTHO05D005956 3.5e-43 180.6 111 79.3
RcHm_v2.0_Chr6g0250151 Rosa chinensis HOM05D005117 ORTHO05D005956 7.9e-43 179.5 107 80.4
RcHm_v2.0_Chr6g0250001 Rosa chinensis HOM05D005117 ORTHO05D005956 1.9e-41 174.9 109 76.1
SHI04054 Sapria himalayana HOM05D005117 ORTHO05D005956 4.6e-35 153.7 102 70.6
RcHm_v2.0_Chr6g0249861 Rosa chinensis HOM05D005117 ORTHO05D005956 1.3e-34 152.1 123 65.9
RcHm_v2.0_Chr6g0250321 Rosa chinensis HOM05D005117 ORTHO05D005956 8.7e-34 149.4 99 74.7
FAN27G2074 Fragaria x ananassa HOM05D005117 ORTHO05D005956 3.4e-30 137.5 82 76.8
RcHm_v2.0_Chr6g0249251 Rosa chinensis HOM05D005117 ORTHO05D005956 5.5e-28 130.2 128 54.7
RcHm_v2.0_Chr6g0249761 Rosa chinensis HOM05D005117 ORTHO05D005956 5.5e-28 130.2 83 74.7
Cfa026610 Carpinus fangiana HOM05D005117 ORTHO05D005956 1.5e-25 122.1 334 29.6
A06p32710 Brassica napus HOM05D005117 ORTHO05D005956 2.0e-25 121.7 97 56.7
BraA06t26200Z Brassica rapa HOM05D005117 ORTHO05D005956 2.0e-25 121.7 97 56.7
RcHm_v2.0_Chr6g0249981 Rosa chinensis HOM05D005117 ORTHO05D005956 2.2e-24 118.2 68 85.3
Rhsim03G0007800 Rhododendron simsii HOM05D000003 ORTHO05D005956 2.8e-24 117.9 134 49.3
RcHm_v2.0_Chr6g0249911 Rosa chinensis HOM05D005117 ORTHO05D005956 3.4e-22 110.9 71 67.6
RcHm_v2.0_Chr6g0249991 Rosa chinensis HOM05D005117 ORTHO05D005956 7.7e-22 109.8 128 47.7
RcHm_v2.0_Chr6g0250221 Rosa chinensis HOM05D005117 ORTHO05D005956 2.5e-20 104.8 66 77.3
CDE05G1587 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 3.6e-19 100.9 144 41.7
RcHm_v2.0_Chr6g0249871 Rosa chinensis HOM05D005117 ORTHO05D005956 3.0e-18 97.8 55 74.5
AagrBONN_evm.TU.Sc2ySwM_340.40 Anthoceros agrestis HOM05D005117 ORTHO05D005956 1.1e-17 95.9 83 54.2
RcHm_v2.0_Chr6g0249791 Rosa chinensis HOM05D005117 ORTHO05D005956 5.9e-14 83.6 55 69.1
RcHm_v2.0_Chr6g0249851 Rosa chinensis HOM05D005117 ORTHO05D005956 4.2e-12 77.4 41 85.4
Rhsim09G0011400 Rhododendron simsii HOM05D005117 ORTHO05D005956 1.8e-10 72.0 50 70.0
RcHm_v2.0_Chr6g0249241 Rosa chinensis HOM05D005117 ORTHO05D005956 1.8e-10 72.0 40 80.0
Cc10_g13530 Coffea canephora HOM05D005117 ORTHO05D005956 1.5e-09 68.9 41 78.0
SHI49642 Sapria himalayana HOM05D005117 ORTHO05D005956 9.7e-09 66.2 41 70.7
SMO169G0068 Selaginella moellendorffii HOM05D005943 ORTHO05D007328 2.8e-08 64.7 185 27.0
SEGI_33948 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 2.8e-08 64.7 47 66.0
RcHm_v2.0_Chr6g0249261 Rosa chinensis HOM05D005117 ORTHO05D005956 2.6e-06 58.2 46 60.9


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