Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000009g0180 Nicotiana tabacum HOM05D013382 ORTHO05D027131 5.5e-80 300.8 144 100.0
Nitab4.5_0004055g0110 Nicotiana tabacum HOM05D013382 ORTHO05D027131 1.9e-24 116.3 66 74.2
Nitab4.5_0000396g0190 Nicotiana tabacum HOM05D013382 ORTHO05D025887 6.6e-17 91.3 106 50.9
CAN.G1126.9 Capsicum annuum HOM05D013382 ORTHO05D027131 2.8e-15 85.9 118 42.4
Nitab4.5_0008911g0010 Nicotiana tabacum HOM05D013382 ORTHO05D000002 7.6e-13 77.8 58 69.0
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 1.9e-11 73.2 88 35.2
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-11 73.2 88 35.2
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 3.2e-11 72.4 58 69.0
Ca_22397_v3 Cicer arietinum L. HOM05D019583 ORTHO05D025031 7.1e-11 71.2 74 39.2
PGSC0003DMG400042551 Solanum tuberosum HOM05D023338 ORTHO05D028486 3.5e-10 68.9 51 49.0
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-10 68.6 61 42.6
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 7.9e-10 67.8 61 44.3
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-09 66.2 76 35.5
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.0e-09 65.9 76 35.5
Nitab4.5_0000041g0410 Nicotiana tabacum HOM05D013382 ORTHO05D025887 5.1e-09 65.1 90 47.8
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-09 64.7 56 41.1
Sp1g30070 Schrenkiella parvula HOM05D000004 ORTHO05D000002 8.7e-09 64.3 50 46.0
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 1.9e-08 63.2 131 29.8
CAN.G2537.1 Capsicum annuum HOM05D000004 ORTHO05D000002 2.5e-08 62.8 83 32.5
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-08 62.8 112 31.2
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-08 62.8 61 39.3
ECA246G2187 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-08 62.8 63 34.9
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 3.3e-08 62.4 61 44.3
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.3e-08 62.4 136 27.2
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 3.3e-08 62.4 75 33.3
CAN.G386.37 Capsicum annuum HOM05D000004 ORTHO05D000002 4.3e-08 62.0 61 37.7
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-08 62.0 60 38.3
Atru.chr3.1983 Acer truncatum HOM05D000004 ORTHO05D000002 5.6e-08 61.6 81 33.3
BcaB07g33616 Brassica carinata HOM05D000004 ORTHO05D000002 7.4e-08 61.2 78 35.9
CAN.G1642.2 Capsicum annuum HOM05D011596 ORTHO05D000002 7.4e-08 61.2 62 41.9
ECA236G2364 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.4e-08 61.2 60 40.0
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 9.6e-08 60.8 51 49.0
ECA233G6229 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-08 60.8 124 28.2
Hund24199 Selenicereus undatus HOM05D000004 ORTHO05D007707 9.6e-08 60.8 108 30.6
Sopen04g023950 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-08 60.8 75 32.0
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 9.6e-08 60.8 118 31.4
BcaB05g22502 Brassica carinata HOM05D011596 ORTHO05D000002 1.6e-07 60.1 130 29.2
Gohir.A08G195550 Gossypium hirsutum HOM05D001322 ORTHO05D001301 1.6e-07 60.1 60 36.7
Sopen02g028910 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-07 60.1 76 31.6
ECA236G5029 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-07 59.7 123 29.3
CAN.G1954.3 Capsicum annuum HOM05D000004 ORTHO05D000002 2.8e-07 59.3 61 36.1
ECA246G1596 Erigeron canadensis HOM05D000004 ORTHO05D000048 2.8e-07 59.3 124 29.0
TPR.G18991 Trifolium pratense HOM05D000004 ORTHO05D000002 3.7e-07 58.9 129 25.6
ECA232G3081 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-07 58.5 51 41.2
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 4.8e-07 58.5 61 36.1
ECA233G2726 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-07 58.2 61 37.7
ECA234G0220 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-07 58.2 117 25.6
ECA236G1497 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-07 58.2 58 36.2
ECA236G4707 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-07 58.2 49 42.9
ECA233G3795 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-06 57.4 49 38.8
Nitab4.5_0000758g0140 Nicotiana tabacum HOM05D013382 ORTHO05D025887 1.1e-06 57.4 79 43.0
BcaC05g28910 Brassica carinata HOM05D019583 ORTHO05D000002 1.4e-06 57.0 74 29.7
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 1.4e-06 57.0 68 29.4
ECA232G4351 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 57.0 61 34.4
ECA233G4737 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 57.0 61 34.4
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 57.0 61 34.4
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 57.0 118 26.3
Sopen01g010380 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 57.0 61 34.4
BolC9t56893H Brassica oleracea HOM05D011596 ORTHO05D000002 1.8e-06 56.6 68 35.3
ECA234G1032 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-06 56.6 59 37.3
COL.COLO4_05954 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.4e-06 56.2 50 46.0
COL.COLO4_16347 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.4e-06 56.2 76 27.6
ECA240G3467 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-06 56.2 51 37.3
ECA247G2578 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-06 56.2 60 31.7
AUR62034871 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.1e-06 55.8 61 37.7
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-06 55.8 57 38.6
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-06 55.8 61 32.8
Psat1g210200 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-06 55.8 125 32.8
Sp7g03930 Schrenkiella parvula HOM05D011596 ORTHO05D000002 3.1e-06 55.8 59 35.6
BcaC08g44498 Brassica carinata HOM05D000004 ORTHO05D027131 4.0e-06 55.5 46 45.7
COL.COLO4_12314 Corchorus olitorius HOM05D001619 ORTHO05D001541 4.0e-06 55.5 138 26.1
COL.COLO4_14043 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.0e-06 55.5 50 44.0
COL.COLO4_33961 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.0e-06 55.5 78 32.1
COL.COLO4_36867 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.0e-06 55.5 69 30.4
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-06 55.5 119 26.9
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-06 55.1 61 32.8
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 5.3e-06 55.1 124 27.4
BcaB07g32201 Brassica carinata HOM05D011596 ORTHO05D000002 6.9e-06 54.7 45 40.0
ECA234G4361 Erigeron canadensis HOM05D000222 ORTHO05D000329 6.9e-06 54.7 119 26.9
ECA238G2984 Erigeron canadensis HOM05D000005 ORTHO05D000012 6.9e-06 54.7 50 40.0
SpUn0980_0010 Schrenkiella parvula HOM05D011596 ORTHO05D000002 6.9e-06 54.7 61 34.4
CAN.G1300.6 Capsicum annuum HOM05D000004 ORTHO05D000002 9.0e-06 54.3 51 39.2
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.0e-06 54.3 48 41.7


User provided reference genes

Program Settings