Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 0.0e+00 1085.1 534 100.0
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 1.3e-267 926.0 540 83.1
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 2.3e-264 915.2 530 84.7
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 6.2e-262 907.1 546 82.2
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 2.3e-256 888.6 534 79.4
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 7.4e-247 857.1 536 77.8
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 2.8e-246 855.1 535 77.6
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 4.8e-246 854.4 536 77.6
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 1.3e-243 846.3 534 75.7
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 4.2e-242 841.3 534 76.2
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 1.2e-241 839.7 572 73.6
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 6.1e-241 837.4 536 76.3
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 5.1e-240 834.3 532 75.9
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 1.5e-236 822.8 535 73.1
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 4.2e-234 814.7 560 70.9
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 9.4e-234 813.5 539 72.4
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 1.8e-232 809.3 540 73.7
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.8e-232 809.3 532 72.6
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.1e-231 806.6 531 72.9
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 2.0e-231 805.8 532 73.3
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 4.4e-231 804.7 529 73.2
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 7.4e-231 803.9 534 72.7
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 9.7e-231 803.5 532 72.7
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 8.2e-230 800.4 535 72.5
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.1e-229 800.0 536 71.8
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 1.1e-229 800.0 540 72.8
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.4e-229 799.7 549 72.3
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.4e-229 799.7 535 72.7
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 5.3e-229 797.7 527 73.2
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.2e-228 796.6 563 69.8
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 8.5e-227 790.4 530 72.1
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 1.1e-226 790.0 540 71.1
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 2.1e-225 785.8 532 71.8
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 6.1e-225 784.3 534 71.0
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 8.0e-225 783.9 538 71.6
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 1.8e-224 782.7 535 72.0
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 2.3e-224 782.3 537 72.1
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 6.7e-224 780.8 529 72.8
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.7e-219 766.1 534 70.4
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 2.2e-219 765.8 543 69.8
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 6.5e-219 764.2 543 69.2
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 7.2e-218 760.8 531 70.6
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.0e-216 756.9 532 68.0
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 2.3e-216 755.7 532 67.9
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 1.2e-215 753.4 533 67.0
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 7.5e-215 750.7 564 65.4
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.3e-214 750.0 508 73.0
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 8.3e-214 747.3 552 69.2
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 1.2e-212 743.4 532 70.3
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.7e-211 739.6 532 67.1
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 2.9e-211 738.8 534 66.1
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 5.0e-211 738.0 549 67.2
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 1.9e-210 736.1 536 67.7
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 7.5e-207 724.2 534 67.0
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 9.8e-207 723.8 486 72.4
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 3.7e-206 721.8 532 66.4
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 4.9e-206 721.5 535 66.0
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 4.9e-206 721.5 554 63.7
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 1.4e-205 719.9 528 65.5
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.4e-205 719.9 490 70.8
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 4.1e-205 718.4 530 67.0
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 5.4e-205 718.0 530 66.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 5.4e-205 718.0 536 65.5
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 1.2e-204 716.8 507 66.7
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 2.0e-204 716.1 538 65.8
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.0e-203 713.8 530 66.6
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 1.9e-202 709.5 532 65.4
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.2e-201 706.8 533 62.9
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 8.0e-201 704.1 532 65.2
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 1.4e-200 703.4 532 65.2
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.4e-200 703.4 611 59.6
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 4.0e-200 701.8 532 65.0
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 2.9e-198 695.7 531 65.0
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 3.7e-198 695.3 532 64.8
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 6.4e-198 694.5 536 64.4
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 8.3e-198 694.1 533 64.9
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 9.8e-191 670.6 541 64.9
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 9.9e-183 644.0 534 62.0
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.7e-179 633.3 513 61.6
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 1.5e-178 630.2 535 60.4
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 2.5e-178 629.4 536 59.0
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.1e-173 614.0 587 56.4
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 2.4e-168 596.3 528 54.2
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.5e-167 593.6 634 51.9
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 4.4e-167 592.0 542 56.6
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 6.4e-166 588.2 527 53.7
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 3.5e-164 582.4 529 53.9
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 4.8e-161 572.0 535 55.7
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 1.4e-160 570.5 529 55.2
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 3.4e-159 565.8 556 55.9
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 3.2e-149 532.7 537 50.7
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 6.2e-145 518.5 566 53.0
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 5.3e-144 515.4 316 75.0
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 2.2e-142 510.0 301 76.7
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 1.6e-137 493.8 534 46.3
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 9.4e-133 478.0 301 74.1
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 5.7e-130 468.8 300 70.7
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.5e-122 444.1 564 45.9
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 2.6e-119 433.3 449 52.3
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.9e-109 400.6 244 77.9
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 1.0e-99 368.2 296 62.2
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 3.4e-90 336.7 646 31.7
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.4e-80 304.7 374 45.5
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 1.7e-78 297.7 554 34.7
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 8.6e-70 268.9 208 64.4
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 3.3e-69 266.9 207 66.2
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 8.9e-67 258.8 207 63.8
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 1.5e-66 258.1 574 31.9
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 4.0e-59 233.4 217 53.0
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 5.8e-58 229.6 204 57.8
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.2e-57 227.6 204 57.4
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 6.4e-57 226.1 204 56.9
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 3.5e-55 220.3 171 61.4
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.2e-50 205.3 104 85.6
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 4.8e-36 156.8 189 47.1
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 8.4e-33 146.0 85 75.3
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 9.3e-32 142.5 131 61.1
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.4e-27 127.9 332 29.5
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.5e-21 108.6 437 22.9
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.5e-16 91.3 90 57.8
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 4.6e-15 87.0 48 81.2
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 1.8e-11 75.1 49 71.4
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 1.3e-09 68.9 56 62.5
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 3.8e-09 67.4 56 62.5
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 2.5e-08 64.7 31 80.6
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 2.5e-08 64.7 31 80.6
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 2.5e-08 64.7 31 80.6
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 2.5e-08 64.7 31 80.6
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 7.2e-08 63.2 31 77.4
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 7.2e-08 63.2 113 38.9
Nn2g11046 Nelumbo nucifera HOM05D006175 ORTHO05D008081 2.7e-07 61.2 50 60.0
CAN.G93.25 Capsicum annuum HOM05D000544 ORTHO05D000137 1.4e-06 58.9 33 75.8


User provided reference genes

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