Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 0.0e+00 1302.7 680 100.0
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 7.9e-289 996.9 688 74.0
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 1.4e-282 976.1 647 77.6
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 3.9e-280 968.0 688 74.0
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 7.4e-279 963.8 692 74.0
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 2.0e-276 955.7 673 75.9
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 7.7e-276 953.7 698 72.1
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 1.9e-274 949.1 673 72.8
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 5.5e-274 947.6 685 72.3
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 1.8e-272 942.6 700 71.6
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 6.7e-272 940.6 687 72.2
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 2.6e-271 938.7 682 72.1
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 3.1e-269 931.8 687 71.2
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 3.1e-269 931.8 675 71.7
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 5.9e-268 927.5 680 71.3
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 5.5e-266 921.0 685 69.9
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.8e-264 916.0 680 71.3
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 2.3e-264 915.6 684 70.0
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 6.8e-264 914.1 691 69.5
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 7.5e-263 910.6 690 69.6
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 9.8e-263 910.2 692 70.4
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 3.1e-261 905.2 684 69.6
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 9.1e-261 903.7 678 68.7
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 9.1e-261 903.7 692 68.5
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 1.0e-259 900.2 690 69.6
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 2.9e-259 898.7 693 67.4
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 5.0e-259 897.9 689 70.5
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 2.5e-258 895.6 729 68.6
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.8e-257 892.1 680 68.1
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 2.8e-257 892.1 680 68.1
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 4.7e-257 891.3 688 68.2
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 6.1e-257 891.0 695 67.1
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 3.0e-256 888.6 691 67.3
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 1.2e-255 886.7 684 66.8
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 2.6e-255 885.6 682 66.0
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.8e-254 882.1 680 67.5
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 3.7e-254 881.7 676 67.8
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 8.3e-254 880.6 679 68.6
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 8.3e-254 880.6 679 68.6
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 7.0e-253 877.5 691 67.1
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 2.5e-250 869.0 689 65.6
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 4.3e-250 868.2 678 65.9
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 5.6e-250 867.8 678 66.2
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 5.6e-250 867.8 689 65.7
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 1.2e-249 866.7 678 65.8
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 2.8e-249 865.5 682 67.7
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 3.6e-249 865.1 684 64.9
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 6.1e-249 864.4 677 66.8
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 8.0e-249 864.0 690 63.9
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 2.3e-248 862.4 677 65.7
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 8.9e-248 860.5 676 66.3
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 8.9e-248 860.5 690 66.8
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 8.9e-248 860.5 718 64.6
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 1.3e-246 856.7 714 63.2
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 4.9e-246 854.7 664 67.0
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 8.3e-246 854.0 674 64.7
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 1.1e-245 853.6 681 64.6
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 2.4e-245 852.4 714 63.0
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 2.0e-244 849.4 684 64.9
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 5.6e-242 841.3 685 63.8
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 2.1e-241 839.3 680 64.0
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 4.7e-241 838.2 690 64.9
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 8.0e-241 837.4 690 64.6
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 1.5e-239 833.2 688 64.8
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 3.4e-239 832.0 688 63.4
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 2.4e-237 825.9 679 63.3
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.0e-236 822.8 723 60.7
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 3.5e-236 822.0 687 63.6
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 3.0e-235 818.9 686 62.8
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 5.6e-234 814.7 674 62.9
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 9.5e-234 813.9 676 61.8
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 8.1e-233 810.8 683 62.2
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 8.1e-233 810.8 688 62.9
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 1.8e-232 809.7 683 62.2
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 2.3e-232 809.3 683 62.2
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 6.8e-232 807.7 693 63.3
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 2.6e-231 805.8 1012 47.9
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 4.4e-231 805.1 687 62.0
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 2.9e-230 802.4 687 62.0
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 2.9e-230 802.4 686 62.0
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 2.9e-230 802.4 685 62.6
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 3.7e-230 802.0 686 62.0
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 4.1e-229 798.5 688 62.8
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.5e-226 790.0 559 70.3
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 1.9e-221 773.1 694 61.5
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 1.9e-221 773.1 685 60.7
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 1.9e-221 773.1 685 60.7
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 1.2e-220 770.4 694 61.4
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 1.5e-218 763.5 516 73.1
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 9.6e-218 760.8 647 59.4
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 7.6e-215 751.1 717 58.9
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 6.7e-203 711.4 698 53.6
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 5.6e-202 708.4 686 56.1
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 9.6e-202 707.6 516 69.6
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 6.2e-201 704.9 452 75.9
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 2.4e-200 703.0 724 52.1
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 4.5e-199 698.7 690 52.9
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 5.1e-195 685.3 688 55.2
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 1.5e-191 673.7 674 54.0
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 2.2e-190 669.8 540 64.1
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 1.6e-188 663.7 830 47.1
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 2.1e-188 663.3 436 74.8
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 2.0e-183 646.7 660 54.1
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 7.9e-172 608.2 422 67.5
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.5e-170 604.0 688 51.0
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 1.5e-162 577.4 702 45.3
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 3.0e-155 553.1 502 56.4
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 1.1e-149 534.6 559 55.6
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 9.8e-146 521.5 579 52.5
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 1.0e-142 511.5 718 43.0
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 3.6e-140 503.1 710 40.0
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 3.5e-119 433.3 432 55.3
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 1.2e-116 424.9 432 52.5
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 8.1e-116 422.2 545 42.0
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 4.3e-109 399.8 427 56.4
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-95 354.4 431 50.6
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 6.6e-94 349.4 299 61.9
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.5e-85 321.6 615 34.8
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 1.6e-84 318.2 376 51.3
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 3.4e-82 310.5 311 56.3
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 6.4e-81 306.2 218 72.0
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 6.2e-76 289.7 356 51.7
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 3.4e-74 283.9 654 33.6
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 1.4e-67 261.9 256 56.6
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 4.6e-63 246.9 240 55.8
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 9.7e-61 239.2 259 59.5
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 3.7e-60 237.3 262 53.1
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 3.8e-57 227.3 141 77.3
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 2.1e-55 221.5 131 80.2
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 3.6e-55 220.7 188 60.6
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 3.7e-52 210.7 272 51.8
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 8.5e-49 199.5 260 50.8
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 2.7e-47 194.5 260 50.0
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 1.1e-43 182.6 107 76.6
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 9.4e-40 169.5 119 69.7
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 2.7e-39 167.9 119 67.2
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 1.3e-36 159.1 243 48.1
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 4.8e-36 157.1 103 78.6
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 1.8e-35 155.2 149 53.0
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 1.2e-34 152.5 102 71.6
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.2e-34 152.5 89 79.8
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.2e-34 152.5 89 79.8
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.2e-34 152.5 89 79.8
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 3.5e-34 151.0 102 70.6
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 1.3e-33 149.1 120 62.5
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-33 148.7 107 63.6
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.2e-33 148.3 85 80.0
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 2.2e-33 148.3 105 68.6
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 2.9e-33 147.9 175 48.6
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 9.4e-32 142.9 207 43.0
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 2.0e-29 135.2 106 63.2
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 2.8e-28 131.3 207 38.2
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.4e-27 129.0 79 73.4
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 2.4e-27 128.3 70 80.0
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 4.5e-26 124.0 79 70.9
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-24 119.0 64 81.2
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 2.6e-21 108.2 161 47.2
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 8.3e-20 103.2 66 71.2
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-19 102.8 95 56.8
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 1.8e-19 102.1 65 70.8
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 1.8e-19 102.1 66 69.7
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 2.4e-19 101.7 107 50.5
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 5.4e-19 100.5 60 75.0
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-18 98.6 64 70.3
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 2.7e-18 98.2 60 75.0
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 1.0e-17 96.3 77 63.6
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 1.3e-17 95.9 56 76.8
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 1.9e-16 92.0 88 59.1
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 9.5e-16 89.7 132 40.9
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 3.6e-15 87.8 193 39.4
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 6.1e-15 87.0 55 69.1
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 4.0e-14 84.3 98 45.9
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 1.2e-13 82.8 46 82.6
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-13 82.4 63 63.5
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 3.4e-13 81.3 48 75.0
Sabra16G0044400 Salix brachista HOM05D002722 ORTHO05D003076 5.8e-13 80.5 77 55.8
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 1.3e-12 79.3 50 70.0
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 1.3e-12 79.3 50 70.0
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 3.7e-12 77.8 57 70.2
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 5.4e-11 73.9 152 32.9
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 1.0e-09 69.7 59 59.3
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-09 68.9 202 34.7
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 6.6e-09 67.0 178 34.3
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 5.6e-08 63.9 74 56.8
Medtr8g007590 Medicago truncatula HOM05D003729 ORTHO05D004384 2.8e-07 61.6 47 55.3
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 6.2e-07 60.5 96 47.9
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 6.8e-06 57.0 32 78.1


User provided reference genes

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