Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 0.0e+00 1151.7 569 100.0
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 8.5e-209 730.7 564 67.7
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 3.2e-208 728.8 557 67.5
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 5.7e-205 718.0 556 66.7
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 1.7e-180 636.7 564 59.4
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 2.2e-180 636.3 519 62.8
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.3e-177 627.1 576 58.0
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 4.7e-175 618.6 544 60.1
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.8e-174 616.7 555 57.7
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 4.0e-174 615.5 556 57.0
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 6.8e-174 614.8 548 59.7
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 8.9e-174 614.4 544 58.8
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 2.6e-173 612.8 557 56.2
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 3.4e-173 612.5 564 57.6
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 7.5e-173 611.3 569 56.9
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 1.3e-172 610.5 555 57.1
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.9e-171 606.7 566 57.8
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.9e-171 606.7 533 58.2
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 2.1e-170 603.2 618 55.3
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.0e-169 600.9 613 53.7
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.3e-169 599.7 584 56.0
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 1.2e-167 594.0 541 57.7
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 4.7e-167 592.0 575 56.2
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 4.7e-167 592.0 551 55.4
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 2.4e-166 589.7 550 56.9
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.4e-165 585.9 542 57.2
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.1e-163 580.9 540 56.7
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 9.2e-163 577.8 555 57.1
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 2.1e-162 576.6 542 56.5
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.3e-161 573.9 535 55.5
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 2.3e-161 573.2 548 55.8
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 6.6e-161 571.6 553 55.2
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 2.5e-160 569.7 532 58.1
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 4.3e-160 568.9 527 55.4
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 4.3e-160 568.9 541 53.8
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 2.1e-159 566.6 540 54.4
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 8.1e-159 564.7 546 55.5
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.4e-158 563.9 518 56.8
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 2.4e-158 563.1 546 55.1
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 2.4e-158 563.1 553 55.2
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 6.9e-158 561.6 551 55.5
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 9.9e-157 557.8 562 53.4
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 3.8e-156 555.8 551 54.1
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 6.4e-156 555.1 547 52.8
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 3.2e-155 552.7 537 54.2
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 5.4e-155 552.0 556 53.8
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.6e-154 550.4 554 54.5
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 6.0e-154 548.5 470 60.0
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 2.3e-153 546.6 526 55.1
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.5e-152 543.9 519 54.5
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.5e-152 543.9 520 54.6
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 3.3e-152 542.7 465 62.2
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 7.3e-152 541.6 564 50.9
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 4.8e-151 538.9 550 51.3
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.1e-150 537.7 522 55.9
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 1.4e-150 537.3 522 55.9
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 4.0e-150 535.8 520 56.5
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.5e-149 533.9 535 53.6
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 7.6e-149 531.6 519 56.3
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.3e-148 530.8 519 55.5
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 3.8e-148 529.3 521 55.7
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 6.4e-148 528.5 552 53.8
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 8.4e-148 528.1 521 55.5
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 8.4e-148 528.1 521 55.5
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.4e-147 527.3 499 57.7
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 7.1e-147 525.0 546 51.5
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 9.3e-147 524.6 526 52.9
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 1.2e-146 524.2 518 55.0
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 2.1e-146 523.5 529 55.4
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 2.7e-146 523.1 519 55.5
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 2.7e-146 523.1 519 54.1
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.0e-145 519.6 606 48.7
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 3.0e-145 519.6 520 54.0
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 6.7e-145 518.5 526 54.9
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 1.1e-144 517.7 534 52.2
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.5e-144 517.3 519 54.1
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 1.5e-144 517.3 519 54.5
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 7.4e-144 515.0 561 50.4
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 7.4e-144 515.0 556 50.0
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 3.7e-143 512.7 416 62.3
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 4.8e-143 512.3 526 53.0
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 4.0e-142 509.2 429 60.4
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 1.5e-141 507.3 537 49.5
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 3.0e-137 493.0 550 48.0
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.5e-136 490.7 540 52.6
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 8.2e-135 485.0 542 48.3
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 3.1e-134 483.0 519 52.0
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 3.1e-134 483.0 541 49.4
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 2.2e-132 476.9 496 53.8
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 3.8e-132 476.1 498 51.8
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.2e-131 473.0 560 48.8
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 8.5e-124 448.4 515 48.3
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 8.5e-124 448.4 386 61.1
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 8.8e-121 438.3 371 61.5
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 3.3e-120 436.4 330 66.1
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 8.5e-116 421.8 546 44.5
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.2e-115 419.9 254 78.0
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.4e-110 404.4 546 43.2
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.5e-109 401.0 551 41.2
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 5.9e-109 399.1 284 69.4
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 7.4e-104 382.1 456 48.0
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 6.3e-95 352.4 414 49.0
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 1.6e-93 347.8 291 62.5
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 5.9e-93 345.9 224 72.8
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 2.0e-85 320.9 258 60.9
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 8.3e-79 298.9 216 66.2
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 2.4e-78 297.4 456 37.9
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.7e-71 274.6 246 58.9
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 3.7e-55 220.3 498 30.7
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 1.4e-54 218.4 247 45.3
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 5.6e-51 206.5 153 67.3
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 4.0e-49 200.3 220 49.1
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 2.4e-41 174.5 242 43.4
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.2e-37 162.2 257 38.5
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.3e-35 154.1 125 60.0
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.4e-30 138.7 229 41.9
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.8e-28 131.7 106 64.2
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 3.3e-27 127.5 217 35.0
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.6e-26 125.2 137 45.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.8e-23 114.0 238 37.4
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 4.9e-23 113.6 316 28.2
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 6.0e-21 106.7 145 42.8
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.7e-18 97.4 186 33.9
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 9.0e-17 92.8 46 91.3
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.8e-16 90.1 105 46.7
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 2.2e-15 88.2 149 38.9
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 3.8e-15 87.4 158 37.3
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 4.9e-15 87.0 142 38.7
SGA_v2.0_scaffold711G53499 Striga asiatica HOM05D037478 ORTHO05D006867 1.2e-13 82.4 132 40.9
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 1.3e-12 79.0 65 58.5
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 2.3e-12 78.2 39 84.6
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.3e-09 67.0 111 36.0
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 1.5e-08 65.5 39 74.4


User provided reference genes

Program Settings