Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 2.7e-135 485.3 242 100.0
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 8.7e-86 320.9 224 73.2
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 4.8e-84 315.1 241 69.3
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 6.2e-84 314.7 243 68.3
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 1.3e-81 307.0 235 66.4
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.3e-81 307.0 241 65.6
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 6.4e-81 304.7 240 65.4
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.7e-79 299.3 243 65.0
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.3e-78 297.0 193 75.1
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.7e-78 296.6 235 65.5
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 8.7e-78 294.3 235 65.1
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 1.1e-77 293.9 250 63.2
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.9e-77 293.1 237 63.7
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.9e-77 293.1 237 63.7
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 2.5e-77 292.7 179 77.7
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 3.3e-77 292.4 178 77.5
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 5.6e-77 291.6 245 63.3
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 5.6e-77 291.6 250 62.4
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 7.3e-77 291.2 166 83.1
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.6e-76 290.0 169 81.1
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 2.1e-76 289.7 240 65.0
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.8e-76 289.3 167 82.6
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 2.8e-76 289.3 231 68.0
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.8e-76 289.3 234 63.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 3.6e-76 288.9 230 65.7
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 4.8e-76 288.5 238 63.0
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 4.8e-76 288.5 242 62.0
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 8.1e-76 287.7 235 63.8
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 1.1e-75 287.3 246 61.4
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.4e-75 287.0 177 76.8
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.4e-75 287.0 237 65.4
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.8e-75 286.6 227 64.3
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 1.8e-75 286.6 240 62.9
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 2.4e-75 286.2 177 76.8
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 2.4e-75 286.2 240 64.2
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.4e-75 286.2 238 63.9
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.4e-75 286.2 230 63.9
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.4e-75 286.2 230 63.9
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 3.1e-75 285.8 238 64.3
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.0e-75 285.4 167 81.4
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 5.3e-75 285.0 178 77.5
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 6.9e-75 284.6 209 69.4
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 9.0e-75 284.3 241 63.1
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 1.2e-74 283.9 246 61.0
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 1.2e-74 283.9 178 77.5
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 2.0e-74 283.1 266 57.9
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 3.4e-74 282.3 242 62.4
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 4.5e-74 282.0 232 64.2
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 5.8e-74 281.6 232 65.1
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 1.3e-73 280.4 187 71.1
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 1.3e-73 280.4 240 62.1
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 2.2e-73 279.6 236 63.1
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 3.8e-73 278.9 177 74.6
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 4.9e-73 278.5 222 66.2
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 8.4e-73 277.7 173 75.1
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.1e-72 277.3 174 77.0
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 1.9e-72 276.6 166 78.3
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.4e-72 276.2 247 61.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 4.2e-72 275.4 231 62.8
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 7.1e-72 274.6 228 63.2
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 7.1e-72 274.6 228 63.2
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 7.1e-72 274.6 228 63.2
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 9.3e-72 274.2 238 59.7
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 9.3e-72 274.2 246 60.6
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.2e-71 273.9 228 62.7
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 1.6e-71 273.5 166 77.7
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.6e-71 273.5 241 59.8
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 2.7e-71 272.7 231 62.3
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 7.9e-71 271.2 229 62.4
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.0e-70 270.8 231 61.9
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 2.3e-70 269.6 227 59.5
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 5.1e-70 268.5 165 77.6
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 8.7e-70 267.7 230 56.5
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.5e-69 266.2 164 76.2
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 3.3e-69 265.8 227 59.0
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 4.3e-69 265.4 238 56.3
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 5.6e-69 265.0 170 75.3
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 7.4e-69 264.6 228 58.8
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 9.6e-69 264.2 156 79.5
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.3e-68 263.8 181 71.8
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 2.1e-68 263.1 225 60.4
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 3.7e-68 262.3 235 60.9
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.8e-68 261.9 152 80.9
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.1e-67 260.8 165 73.9
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.4e-67 260.4 172 69.2
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 1.2e-66 257.3 191 66.5
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 1.2e-66 257.3 191 66.5
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 4.2e-64 248.8 176 70.5
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 2.7e-63 246.1 265 51.3
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 4.3e-61 238.8 193 63.2
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 3.7e-60 235.7 163 65.6
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.4e-59 233.8 180 65.0
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.4e-59 233.0 176 62.5
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 9.0e-59 231.1 188 58.0
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.5e-58 230.3 179 64.2
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 7.6e-58 228.0 211 60.2
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 7.9e-55 218.0 231 54.1
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.3e-54 217.2 174 58.0
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 6.7e-54 214.9 131 74.8
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.6e-52 210.3 230 56.1
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.2e-50 204.1 130 72.3
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 2.9e-49 199.5 190 61.1
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 2.0e-45 186.8 111 78.4
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 2.5e-45 186.4 116 75.0
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 5.9e-42 175.3 113 70.8
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 5.0e-41 172.2 113 69.9
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.9e-40 170.2 113 69.0
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 2.7e-39 166.4 184 48.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 6.7e-38 161.8 119 69.7
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 2.0e-37 160.2 108 74.1
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.1e-35 154.5 157 56.7
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 1.8e-35 153.7 179 44.1
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.5e-32 144.1 109 62.4
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.6e-23 112.8 159 40.3
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 3.7e-20 102.8 129 49.6
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 4.0e-14 82.8 58 67.2
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 6.8e-14 82.0 182 29.1
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 2.8e-12 76.6 180 25.6
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.0e-09 68.2 180 27.2
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.9e-08 63.9 67 49.3


User provided reference genes

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