Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 0.0e+00 1337.0 667 100.0
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 0.0e+00 1085.9 672 81.1
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 1.3e-309 1065.8 647 81.1
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 1.6e-307 1058.9 657 81.0
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 6.5e-293 1010.4 670 76.0
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 3.6e-291 1004.6 595 82.5
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 3.0e-290 1001.5 587 83.3
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 6.8e-290 1000.3 647 75.9
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 2.6e-289 998.4 653 76.1
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 4.4e-289 997.7 647 75.6
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 4.1e-287 991.1 594 82.7
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 5.4e-287 990.7 597 79.7
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 1.6e-286 989.2 653 75.2
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 7.7e-286 986.9 647 75.4
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 7.7e-286 986.9 625 76.8
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 3.8e-285 984.6 587 80.2
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 1.9e-284 982.2 547 84.6
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 3.3e-284 981.5 591 79.4
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 3.3e-284 981.5 639 75.9
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 4.2e-284 981.1 649 75.7
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 4.2e-284 981.1 642 75.5
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 9.5e-284 979.9 596 79.2
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 1.2e-283 979.5 637 75.4
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 2.1e-283 978.8 661 73.8
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 2.1e-283 978.8 650 75.8
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 1.8e-282 975.7 657 74.6
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.8e-282 975.7 651 73.7
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 1.8e-282 975.7 653 73.8
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 2.3e-282 975.3 649 74.4
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 6.8e-282 973.8 593 79.4
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 8.9e-282 973.4 586 79.2
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 3.4e-281 971.5 599 78.3
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 5.7e-281 970.7 661 73.8
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 5.7e-281 970.7 586 78.3
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 7.5e-281 970.3 649 74.3
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 1.3e-280 969.5 654 74.9
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.7e-280 969.1 651 73.3
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 2.2e-280 968.8 624 75.6
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 2.2e-280 968.8 597 78.6
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 4.9e-280 967.6 645 72.4
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 4.9e-280 967.6 658 73.9
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 1.1e-279 966.5 647 75.3
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 1.8e-279 965.7 586 79.0
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 2.4e-279 965.3 649 73.2
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 7.0e-279 963.8 664 71.7
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 2.7e-278 961.8 586 78.8
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 7.8e-278 960.3 588 77.6
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.3e-277 959.5 591 77.0
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 5.0e-277 957.6 624 74.0
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 1.1e-276 956.4 595 77.6
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.5e-276 956.1 588 77.2
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 2.5e-276 955.3 558 80.6
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 3.3e-276 954.9 650 73.2
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 2.1e-275 952.2 633 73.0
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.8e-275 951.8 647 73.4
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 2.8e-275 951.8 602 75.9
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 4.7e-275 951.0 588 76.9
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 8.0e-275 950.3 657 72.1
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 8.0e-275 950.3 620 73.9
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 1.0e-274 949.9 627 73.5
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.0e-274 949.9 647 73.4
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 1.4e-274 949.5 635 73.9
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 2.3e-274 948.7 634 74.1
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 3.1e-274 948.3 541 81.9
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 5.2e-274 947.6 661 72.2
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 6.8e-274 947.2 591 76.1
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 8.9e-274 946.8 621 73.6
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 1.2e-273 946.4 541 81.5
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 1.5e-273 946.0 558 79.6
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 2.6e-273 945.3 646 72.0
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 3.4e-273 944.9 624 73.7
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 9.8e-273 943.3 595 75.6
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 1.7e-272 942.6 595 75.6
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 2.2e-272 942.2 585 76.4
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 3.7e-272 941.4 633 73.0
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 8.3e-272 940.3 537 81.4
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 1.4e-271 939.5 542 80.3
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 2.4e-271 938.7 633 73.0
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 3.2e-271 938.3 637 71.4
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 3.2e-271 938.3 585 76.4
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 4.1e-271 937.9 625 73.8
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 5.4e-271 937.6 625 73.8
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 7.0e-271 937.2 641 72.7
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 9.2e-271 936.8 635 72.9
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 1.6e-270 936.0 555 78.4
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 1.6e-270 936.0 641 72.7
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 2.7e-270 935.3 595 74.8
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 4.6e-270 934.5 630 74.4
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.0e-269 933.3 590 75.1
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.3e-269 932.9 645 72.7
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 1.7e-269 932.6 594 75.8
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 3.9e-269 931.4 578 76.5
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 3.9e-269 931.4 643 71.4
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 1.9e-268 929.1 559 78.0
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 1.9e-268 929.1 762 64.2
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 1.6e-267 926.0 543 80.8
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 1.2e-265 919.8 628 72.0
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 2.0e-265 919.1 641 69.9
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 5.8e-265 917.5 524 83.4
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 1.7e-261 906.0 527 80.1
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 2.8e-259 898.7 547 76.2
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 2.3e-258 895.6 633 70.9
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 1.2e-257 893.3 546 77.7
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 1.5e-257 892.9 633 70.6
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 1.5e-257 892.9 592 73.6
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.6e-257 892.1 609 75.7
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 3.4e-257 891.7 634 69.4
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 1.3e-256 889.8 635 69.8
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 5.6e-252 874.4 528 77.5
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 2.2e-248 862.4 666 66.2
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 3.5e-246 855.1 633 67.5
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 1.7e-245 852.8 550 73.5
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 8.4e-240 833.9 560 72.9
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 1.4e-239 833.2 565 74.2
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 5.4e-239 831.2 659 65.7
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 6.0e-230 801.2 444 86.3
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 1.3e-227 793.5 543 69.1
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 1.1e-226 790.4 444 83.6
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 3.2e-223 778.9 606 64.2
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 5.1e-221 771.5 585 64.1
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.5e-220 770.0 439 82.9
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 2.2e-216 756.1 533 70.5
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 1.2e-201 707.2 513 68.0
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 9.1e-194 681.0 512 67.0
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 1.1e-191 674.1 451 71.8
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 1.4e-178 630.6 534 58.6
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 1.5e-167 594.0 357 76.2
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 5.2e-165 585.5 344 79.4
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 5.2e-157 558.9 563 53.8
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 4.9e-147 525.8 395 68.9
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 3.1e-141 506.5 557 48.3
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 3.1e-141 506.5 417 63.8
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 1.2e-140 504.6 544 52.8
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 7.6e-140 501.9 274 86.1
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 2.5e-135 486.9 276 81.5
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 1.7e-128 464.2 340 68.2
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 3.2e-114 416.8 574 43.4
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 4.8e-110 402.9 288 65.6
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 1.2e-97 361.7 643 35.9
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 1.4e-88 331.6 184 82.6
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 6.7e-88 329.3 263 65.8
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 5.9e-84 316.2 590 35.8
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 2.2e-83 314.3 188 75.5
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 1.5e-79 301.6 499 38.1
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 1.3e-78 298.5 167 82.6
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 3.1e-77 293.9 175 78.9
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 2.9e-75 287.3 175 76.6
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.0e-68 264.6 390 41.8
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 1.8e-64 251.5 609 32.8
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 3.0e-64 250.8 317 46.7
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 9.8e-63 245.7 183 64.5
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.2e-60 238.8 140 80.7
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.5e-58 231.1 599 30.6
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 9.8e-47 192.6 120 80.8
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 4.9e-46 190.3 117 76.9
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 5.0e-43 180.3 107 78.5
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 1.5e-42 178.7 104 80.8
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 8.0e-41 172.9 155 57.4
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.7e-36 157.9 139 57.6
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 4.9e-30 137.1 120 57.5
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 3.5e-28 131.0 65 92.3
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 1.3e-27 129.0 107 59.8
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 1.3e-27 129.0 77 74.0
Lsat_1_v5_gn_4_11801 Lactuca sativa HOM05D004119 ORTHO05D004797 2.3e-27 128.3 137 47.4
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 1.9e-26 125.2 67 85.1
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 1.2e-17 95.9 64 73.4
TAR633G0263 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.5e-10 72.4 54 66.7
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 2.5e-10 71.6 82 47.6
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 1.8e-08 65.5 38 71.1
BraA01t00507Z Brassica rapa HOM05D004119 ORTHO05D004797 2.4e-08 65.1 85 40.0
TPR.G25082 Trifolium pratense HOM05D004119 ORTHO05D004797 2.4e-08 65.1 78 51.3
Actinidia39373 Actinidia chinensis HOM05D004119 ORTHO05D004797 7.6e-07 60.1 71 43.7


User provided reference genes

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