Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 2.8e-180 635.2 321 100.0
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.2e-140 503.4 313 78.6
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 7.6e-138 494.2 301 79.4
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.3e-132 476.9 308 76.0
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 1.7e-129 466.5 315 74.0
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 3.8e-129 465.3 304 73.7
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 5.4e-128 461.5 313 73.5
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 1.2e-127 460.3 306 75.2
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 6.7e-126 454.5 308 73.4
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 2.5e-125 452.6 306 73.9
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 7.4e-125 451.1 301 74.4
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 6.2e-124 448.0 306 72.9
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 6.2e-124 448.0 312 72.4
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.1e-123 447.2 305 72.5
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 5.3e-123 444.9 302 73.2
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.0e-123 444.1 302 72.2
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 4.5e-122 441.8 309 69.9
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 1.3e-121 440.3 300 72.7
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 4.9e-121 438.3 312 69.2
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 5.5e-120 434.9 301 70.8
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 5.5e-120 434.9 306 69.3
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.2e-119 433.7 302 70.2
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 1.2e-119 433.7 302 70.5
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 1.6e-119 433.3 302 70.5
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.5e-119 432.2 302 69.2
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 7.9e-119 431.0 306 68.6
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 1.8e-118 429.9 305 69.5
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 3.9e-118 428.7 321 67.6
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 4.3e-117 425.2 302 70.5
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 7.4e-117 424.5 314 67.5
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 9.6e-117 424.1 312 68.3
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 1.6e-116 423.3 311 66.2
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 2.1e-116 422.9 304 68.4
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 4.8e-116 421.8 302 68.5
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.1e-115 420.6 300 69.3
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.1e-115 420.6 307 67.1
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.1e-115 420.6 302 68.5
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 1.4e-115 420.2 310 68.7
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 3.1e-115 419.1 309 68.0
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 4.0e-115 418.7 302 68.9
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 5.3e-115 418.3 309 67.0
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 6.9e-115 417.9 307 65.8
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 9.0e-115 417.5 309 67.6
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 9.0e-115 417.5 309 68.3
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 9.0e-115 417.5 302 67.2
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 9.0e-115 417.5 307 65.8
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 9.0e-115 417.5 302 69.2
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 1.5e-114 416.8 313 67.1
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.5e-114 416.8 307 66.4
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.0e-114 416.4 307 66.8
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.6e-114 416.0 309 67.0
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 3.4e-114 415.6 309 67.6
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 4.5e-114 415.2 309 66.3
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 5.8e-114 414.8 306 67.3
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 1.3e-113 413.7 303 66.7
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 1.7e-113 413.3 296 67.9
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 3.8e-113 412.1 301 68.1
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 6.5e-113 411.4 299 66.9
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 1.4e-112 410.2 307 65.1
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 3.2e-112 409.1 304 65.1
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 4.2e-112 408.7 302 65.9
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 7.1e-112 407.9 307 64.2
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.6e-111 406.8 318 62.9
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 8.7e-110 401.0 300 65.0
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.1e-109 400.6 307 64.8
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 1.5e-109 400.2 306 65.0
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 1.5e-109 400.2 308 66.2
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 1.9e-109 399.8 301 65.1
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 2.5e-109 399.4 300 64.3
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.7e-108 395.6 309 63.8
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 4.8e-108 395.2 318 62.9
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 6.3e-108 394.8 304 65.1
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.1e-107 392.5 310 63.5
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 4.5e-106 388.7 320 60.9
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 5.9e-106 388.3 308 66.6
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.0e-105 387.5 301 63.5
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.3e-105 387.1 302 63.9
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 6.5e-105 384.8 302 64.9
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 9.4e-104 380.9 300 62.0
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.1e-101 374.0 298 65.1
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.8e-99 366.7 313 59.1
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 3.1e-99 365.9 308 59.4
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 1.8e-94 350.1 259 65.3
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 5.7e-93 345.1 306 55.6
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 1.4e-91 340.5 244 70.9
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 3.2e-88 329.3 230 70.9
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 2.2e-84 316.6 304 55.6
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 4.8e-84 315.5 255 64.3
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 1.4e-83 313.9 254 64.2
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 3.5e-82 309.3 279 57.3
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 5.9e-82 308.5 420 41.4
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.9e-80 303.5 310 53.5
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 5.2e-78 295.4 216 68.5
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.0e-74 283.5 195 69.2
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 1.9e-72 276.9 251 60.2
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 6.1e-71 271.9 219 66.2
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 1.5e-69 267.3 190 72.1
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.8e-68 262.3 309 45.6
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.1e-64 251.1 204 61.3
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.9e-64 250.4 312 46.8
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 2.2e-60 236.9 165 64.8
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.9e-56 223.8 312 43.6
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 6.1e-55 218.8 260 48.1
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 1.0e-54 218.0 125 80.8
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 2.3e-54 216.9 172 64.5
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 3.4e-53 213.0 144 70.1
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 8.3e-52 208.4 131 70.2
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 9.2e-51 204.9 170 62.4
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 8.6e-49 198.4 163 60.7
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 8.9e-46 188.3 124 67.7
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 8.9e-46 188.3 124 67.7
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 8.9e-46 188.3 124 67.7
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 7.5e-45 185.3 165 58.2
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.2e-44 183.7 100 80.0
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.1e-41 172.6 159 57.9
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 5.2e-38 162.5 125 68.0
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 3.2e-35 153.3 115 61.7
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 1.4e-30 137.9 102 70.6
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.4e-22 111.3 72 72.2
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.8e-20 103.2 102 54.9
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.8e-20 103.2 112 50.0
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.8e-20 103.2 112 50.0
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.9e-20 102.8 112 54.5
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.1e-19 101.7 113 54.9
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 3.2e-19 100.1 145 44.8
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 4.6e-18 96.3 152 37.5
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.9e-16 90.9 95 54.7
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 1.3e-07 61.6 68 50.0
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.3e-07 61.6 45 71.1
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 1.6e-07 61.2 69 47.8
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 6.2e-07 59.3 62 53.2


User provided reference genes

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