Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 2.9e-154 548.5 277 100.0
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 1.8e-124 449.5 277 83.8
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 4.6e-123 444.9 277 81.9
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 8.3e-117 424.1 278 78.8
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 3.9e-106 388.7 279 74.9
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 1.9e-105 386.3 255 78.8
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 3.3e-105 385.6 279 75.6
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.6e-104 383.3 286 73.1
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 8.1e-104 380.9 284 72.2
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 2.3e-103 379.4 282 74.1
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 2.3e-103 379.4 278 74.1
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 5.2e-103 378.3 287 72.1
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 1.2e-102 377.1 210 88.6
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 1.2e-102 377.1 267 74.2
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 2.0e-102 376.3 210 89.5
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 2.6e-102 375.9 280 71.1
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 2.6e-102 375.9 277 72.2
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 9.9e-102 374.0 280 71.4
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 9.9e-102 374.0 283 70.7
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 9.9e-102 374.0 255 78.8
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 1.3e-101 373.6 277 71.5
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 1.7e-101 373.2 238 81.5
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 1.7e-101 373.2 238 80.7
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 1.7e-101 373.2 283 71.0
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 3.7e-101 372.1 278 72.3
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 4.9e-101 371.7 266 72.9
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 4.9e-101 371.7 289 70.9
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 6.4e-101 371.3 286 69.6
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 8.4e-101 370.9 218 84.9
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 8.4e-101 370.9 285 71.2
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 8.4e-101 370.9 252 75.8
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 8.4e-101 370.9 280 71.8
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.1e-100 370.5 268 74.3
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 1.1e-100 370.5 211 87.2
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 1.4e-100 370.2 280 70.7
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 1.9e-100 369.8 267 74.2
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 2.4e-100 369.4 265 74.3
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 2.4e-100 369.4 281 71.9
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 2.4e-100 369.4 267 72.3
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 4.1e-100 368.6 218 84.4
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 5.4e-100 368.2 286 70.6
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 9.2e-100 367.5 267 72.7
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 9.2e-100 367.5 281 69.0
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 1.2e-99 367.1 287 70.0
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 1.6e-99 366.7 283 71.7
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 1.6e-99 366.7 235 78.7
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 1.6e-99 366.7 283 71.4
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 3.5e-99 365.5 277 70.4
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 4.6e-99 365.2 227 80.2
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 4.6e-99 365.2 236 78.8
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 4.6e-99 365.2 281 71.2
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 6.0e-99 364.8 225 81.8
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 6.0e-99 364.8 248 76.2
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 1.0e-98 364.0 228 82.0
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 1.3e-98 363.6 212 86.3
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.7e-98 363.2 216 83.8
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 1.7e-98 363.2 270 70.0
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 2.3e-98 362.8 219 82.6
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 2.3e-98 362.8 225 80.0
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 3.9e-98 362.1 263 72.6
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 8.6e-98 360.9 262 71.8
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 1.1e-97 360.5 281 69.8
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 1.5e-97 360.1 272 71.3
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 1.5e-97 360.1 265 72.5
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 1.9e-97 359.8 215 81.9
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 4.3e-97 358.6 274 71.9
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 4.3e-97 358.6 214 82.7
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 5.6e-97 358.2 208 84.6
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 1.2e-96 357.1 243 76.1
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 1.6e-96 356.7 239 77.0
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 1.6e-96 356.7 274 70.1
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.6e-96 356.7 232 78.0
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 2.1e-96 356.3 216 83.8
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 2.1e-96 356.3 267 73.4
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 2.1e-96 356.3 277 71.1
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 3.6e-96 355.5 250 72.8
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 4.7e-96 355.1 233 76.4
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 6.2e-96 354.8 240 76.2
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 6.2e-96 354.8 217 80.6
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 8.1e-96 354.4 219 80.4
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 8.1e-96 354.4 255 72.2
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 8.1e-96 354.4 281 68.3
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.1e-95 354.0 272 70.2
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.4e-95 353.6 239 76.2
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 1.8e-95 353.2 217 80.6
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 2.4e-95 352.8 226 77.4
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 2.4e-95 352.8 231 77.5
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 4.0e-95 352.1 222 77.9
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 4.0e-95 352.1 238 76.1
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 4.0e-95 352.1 215 80.0
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 6.8e-95 351.3 286 66.1
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 6.8e-95 351.3 252 71.8
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 6.8e-95 351.3 212 84.0
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 1.2e-94 350.5 222 79.7
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 1.5e-94 350.1 222 78.8
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 1.5e-94 350.1 222 78.8
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 2.0e-94 349.7 216 79.6
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.0e-94 349.7 300 63.3
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 2.6e-94 349.4 270 71.1
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 2.6e-94 349.4 280 69.3
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 3.4e-94 349.0 284 68.7
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 1.4e-92 343.6 231 76.2
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 1.9e-92 343.2 206 81.1
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 4.2e-92 342.0 206 80.6
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 2.1e-91 339.7 276 64.9
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 3.5e-91 339.0 224 79.5
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 6.0e-91 338.2 275 68.0
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 1.3e-90 337.0 296 65.2
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 1.7e-90 336.7 206 79.6
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 5.1e-90 335.1 212 78.3
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 6.6e-90 334.7 206 79.1
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 1.1e-89 334.0 216 76.4
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.9e-89 333.2 318 58.8
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 5.6e-89 331.6 280 66.8
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 7.3e-89 331.3 198 81.8
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 2.8e-88 329.3 224 74.6
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 6.9e-87 324.7 309 62.1
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 4.4e-86 322.0 166 93.4
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 4.9e-85 318.5 233 72.5
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 1.9e-84 316.6 207 77.3
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 3.2e-84 315.8 196 79.6
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 4.2e-84 315.5 256 67.2
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 4.8e-80 302.0 166 88.6
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 8.1e-80 301.2 193 77.7
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 1.4e-79 300.4 160 89.4
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 1.4e-79 300.4 238 69.7
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.3e-79 298.5 206 73.3
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 6.9e-79 298.1 221 68.8
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 1.2e-78 297.4 200 76.0
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 2.6e-78 296.2 242 64.0
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 6.0e-75 285.0 274 62.0
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.3e-74 283.1 237 63.7
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.9e-73 280.0 283 58.3
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 2.1e-72 276.6 145 93.8
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.1e-71 272.7 298 54.7
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.2e-70 270.8 287 54.7
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 1.2e-70 270.8 199 70.9
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 1.5e-70 270.4 148 87.2
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 5.8e-70 268.5 245 63.7
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 1.4e-68 263.8 228 64.9
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 6.0e-67 258.5 180 73.9
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 5.1e-66 255.4 202 68.8
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 6.9e-63 245.0 170 73.5
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 9.3e-60 234.6 167 73.7
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 1.6e-59 233.8 230 56.5
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 1.3e-58 230.7 210 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 7.7e-54 214.9 140 71.4
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 7.7e-54 214.9 232 45.7
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 7.4e-49 198.4 175 64.6
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.1e-47 194.5 124 79.0
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 5.3e-47 192.2 107 83.2
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 2.2e-45 186.8 316 40.8
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 1.2e-38 164.5 145 59.3
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 1.9e-36 157.1 188 42.6
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 2.1e-35 153.7 200 41.5
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 1.7e-32 144.1 225 39.1
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 2.2e-32 143.7 84 84.5
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 1.8e-23 114.0 69 78.3
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 9.1e-23 111.7 69 76.8
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 1.2e-19 101.3 59 84.7
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 4.9e-16 89.4 126 50.8
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.8e-10 70.9 84 48.8
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 2.3e-10 70.5 61 60.7
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 2.3e-10 70.5 36 88.9
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 1.5e-09 67.8 118 39.0
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 4.4e-09 66.2 32 93.8
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.3e-08 64.7 155 35.5
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 2.9e-08 63.5 55 58.2
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.8e-07 60.8 42 69.0
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 1.8e-07 60.8 40 70.0
Rhsim08G0128300 Rhododendron simsii HOM05D004138 ORTHO05D339665 7.0e-07 58.9 31 83.9
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 9.2e-07 58.5 34 79.4


User provided reference genes

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