Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 2.0e-95 352.4 181 100.0
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 1.8e-64 249.6 188 74.5
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 2.0e-63 246.1 162 77.8
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 4.5e-63 245.0 145 83.4
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 4.5e-63 245.0 145 83.4
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 5.9e-63 244.6 148 81.8
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 5.9e-63 244.6 148 81.8
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.3e-62 243.4 148 81.1
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 1.3e-62 243.4 148 79.7
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 1.3e-62 243.4 148 79.7
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 1.3e-62 243.4 146 82.9
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 2.2e-62 242.7 162 76.5
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 2.2e-62 242.7 179 69.3
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 8.5e-62 240.7 148 79.7
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 1.5e-61 240.0 180 70.0
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 1.5e-61 240.0 146 80.1
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 1.5e-61 240.0 146 80.1
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 1.9e-61 239.6 148 82.4
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 1.9e-61 239.6 169 69.8
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 2.5e-61 239.2 149 80.5
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 5.5e-61 238.0 149 79.9
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 5.5e-61 238.0 150 79.3
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 9.4e-61 237.3 180 70.6
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 1.2e-60 236.9 185 71.4
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 1.6e-60 236.5 148 77.7
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 1.6e-60 236.5 151 78.8
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 1.6e-60 236.5 148 80.4
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 2.1e-60 236.1 146 81.5
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 2.7e-60 235.7 148 80.4
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 3.6e-60 235.3 179 70.9
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 4.7e-60 235.0 166 71.1
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 4.7e-60 235.0 148 79.7
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 6.1e-60 234.6 150 79.3
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 8.0e-60 234.2 169 71.0
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 1.0e-59 233.8 174 70.7
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 1.0e-59 233.8 174 70.7
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 1.4e-59 233.4 154 77.3
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 1.8e-59 233.0 148 77.7
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 2.3e-59 232.6 148 77.0
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 2.3e-59 232.6 150 79.3
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 2.3e-59 232.6 148 78.4
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 3.0e-59 232.3 149 77.9
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 3.0e-59 232.3 155 74.8
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 4.0e-59 231.9 182 69.8
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 4.0e-59 231.9 162 74.7
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 4.0e-59 231.9 150 76.7
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 5.2e-59 231.5 148 79.1
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 5.2e-59 231.5 148 79.1
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 5.2e-59 231.5 181 67.4
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 6.7e-59 231.1 134 84.3
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 6.7e-59 231.1 148 79.1
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 6.7e-59 231.1 150 78.0
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 8.8e-59 230.7 165 73.3
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.2e-58 230.3 158 73.4
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 1.2e-58 230.3 148 75.7
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 1.2e-58 230.3 181 69.1
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 1.2e-58 230.3 148 78.4
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 1.5e-58 229.9 130 83.8
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 2.0e-58 229.6 129 86.8
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 2.0e-58 229.6 129 86.8
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 2.0e-58 229.6 148 77.0
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 2.0e-58 229.6 130 83.8
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 2.6e-58 229.2 130 85.4
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 3.3e-58 228.8 130 84.6
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 3.3e-58 228.8 130 84.6
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 3.3e-58 228.8 142 78.2
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 4.4e-58 228.4 130 83.8
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 4.4e-58 228.4 135 81.5
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 4.4e-58 228.4 129 86.0
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 4.4e-58 228.4 149 77.2
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 4.4e-58 228.4 148 77.7
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 4.4e-58 228.4 130 84.6
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 5.7e-58 228.0 130 83.8
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 5.7e-58 228.0 130 83.8
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 5.7e-58 228.0 130 83.8
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 5.7e-58 228.0 130 83.8
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 5.7e-58 228.0 130 83.8
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 5.7e-58 228.0 130 84.6
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 7.5e-58 227.6 148 76.4
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 1.3e-57 226.9 121 89.3
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 1.3e-57 226.9 181 68.5
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 1.3e-57 226.9 146 77.4
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 1.3e-57 226.9 134 79.9
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 1.7e-57 226.5 148 77.0
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 2.2e-57 226.1 150 76.0
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 3.7e-57 225.3 130 82.3
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 3.7e-57 225.3 130 82.3
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 4.8e-57 224.9 130 82.3
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 1.8e-56 223.0 175 68.6
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 3.1e-56 222.2 160 71.9
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 7.0e-56 221.1 184 65.2
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 7.0e-56 221.1 168 67.9
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 5.9e-55 218.0 142 76.1
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 1.7e-54 216.5 182 65.9
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 1.1e-53 213.8 188 62.8
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 1.5e-53 213.4 148 73.6
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.9e-53 213.0 114 88.6
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 1.9e-53 213.0 150 70.0
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 2.5e-53 212.6 129 81.4
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 5.5e-53 211.5 148 74.3
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 7.2e-53 211.1 151 70.9
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 9.4e-53 210.7 147 74.8
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 2.1e-52 209.5 123 81.3
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 2.1e-52 209.5 142 75.4
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 2.7e-52 209.1 134 79.9
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 1.4e-51 206.8 148 71.6
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 1.4e-51 206.8 148 71.6
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 5.2e-51 204.9 133 78.9
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 2.0e-50 203.0 145 73.8
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 2.8e-49 199.1 169 66.9
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 5.4e-48 194.9 272 45.2
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 2.7e-47 192.6 109 84.4
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 3.5e-47 192.2 124 76.6
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 4.5e-47 191.8 142 64.8
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 1.3e-46 190.3 256 45.3
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.7e-46 189.9 131 69.5
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 2.9e-46 189.1 117 78.6
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 3.8e-46 188.7 148 66.9
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 5.0e-46 188.3 185 60.5
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.5e-45 186.8 131 68.7
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 6.1e-44 181.4 148 64.9
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 1.8e-40 169.9 122 68.9
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 1.0e-38 164.1 131 64.1
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 2.3e-38 162.9 173 56.1
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 2.9e-38 162.5 123 64.2
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 1.2e-34 150.6 87 85.1
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 5.8e-34 148.3 87 82.8
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 7.5e-34 147.9 87 81.6
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 1.3e-33 147.1 82 90.2
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 8.3e-33 144.4 108 59.3
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 4.1e-32 142.1 87 79.3
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 9.2e-32 141.0 82 84.1
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 1.0e-30 137.5 82 85.4
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 1.2e-26 124.0 97 58.8
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 2.6e-26 122.9 87 74.7
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 2.9e-25 119.4 143 46.2
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 1.7e-17 93.6 54 83.3
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 1.9e-16 90.1 90 62.2
Nn1g07101 Nelumbo nucifera HOM05D005249 ORTHO05D006457 1.2e-15 87.4 64 64.1
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 2.7e-15 86.3 54 72.2
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 1.3e-14 84.0 44 84.1
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 1.7e-14 83.6 54 75.9
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 9.9e-10 67.8 63 46.0
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 9.9e-10 67.8 87 44.8


User provided reference genes

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