Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 4.4e-250 867.5 426 100.0
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 3.6e-204 714.9 433 81.8
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 6.9e-195 684.1 426 76.5
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.0e-194 682.6 427 76.8
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.3e-193 679.9 426 76.1
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 2.9e-193 678.7 427 75.4
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 1.4e-192 676.4 427 75.4
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.4e-192 675.6 417 76.7
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 2.4e-192 675.6 428 75.5
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 7.8e-191 670.6 424 73.6
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 2.8e-188 662.1 430 76.0
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.4e-187 659.8 418 77.0
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.9e-185 652.1 424 72.9
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.9e-185 652.1 424 73.1
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 5.5e-176 621.3 480 63.8
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 2.3e-174 615.9 423 70.7
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 9.6e-173 610.5 488 62.1
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 6.5e-169 597.8 424 65.6
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 1.9e-168 596.3 435 67.4
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 3.2e-168 595.5 424 65.1
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 7.1e-168 594.3 425 65.4
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.3e-166 589.3 423 66.7
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 1.9e-165 586.3 425 64.7
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.5e-165 585.9 425 65.2
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 7.4e-165 584.3 451 63.0
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 8.2e-164 580.9 434 64.1
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.4e-163 580.1 425 65.4
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.4e-163 579.3 441 63.3
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 5.3e-163 578.2 430 62.3
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 5.3e-163 578.2 431 65.0
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 9.0e-163 577.4 441 63.0
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 2.0e-162 576.2 424 64.4
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 2.1e-159 566.2 430 64.4
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 4.6e-159 565.1 416 64.9
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 3.9e-158 562.0 424 62.0
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 2.8e-156 555.8 429 61.8
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 3.7e-156 555.4 424 61.6
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 3.7e-156 555.4 424 61.6
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.8e-156 555.1 426 62.2
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 4.8e-156 555.1 423 61.2
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 8.2e-156 554.3 424 61.6
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 1.1e-155 553.9 424 61.1
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 3.1e-155 552.4 424 61.6
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 5.3e-155 551.6 453 59.2
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 9.1e-155 550.8 440 59.1
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.5e-154 550.1 424 61.1
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.5e-154 550.1 424 61.1
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 2.0e-154 549.7 423 61.0
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 7.7e-154 547.7 426 61.0
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 7.7e-154 547.7 463 59.4
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.0e-153 547.4 423 60.8
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.3e-153 547.0 422 60.2
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 6.5e-153 544.7 427 60.7
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 6.5e-153 544.7 430 60.0
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.1e-152 543.9 433 60.5
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.4e-152 543.5 424 61.3
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.9e-152 543.1 434 60.1
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 7.2e-152 541.2 423 61.0
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 7.2e-152 541.2 414 61.4
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 9.4e-152 540.8 423 59.8
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 8.8e-150 534.3 433 59.1
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 2.6e-149 532.7 430 59.5
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.3e-149 532.3 452 58.0
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 7.4e-149 531.2 373 67.3
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 6.3e-148 528.1 431 58.2
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 1.5e-146 523.5 349 71.9
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 7.7e-146 521.2 426 59.2
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 5.0e-145 518.5 424 59.2
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.2e-144 515.8 417 60.7
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.4e-144 514.2 424 58.7
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 2.7e-143 512.7 430 58.4
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 6.1e-143 511.5 424 58.5
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 2.0e-141 506.5 429 57.1
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 4.8e-140 501.9 444 54.5
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 2.2e-137 493.0 425 55.1
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 8.5e-129 464.5 426 54.2
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 8.0e-127 458.0 430 52.1
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 9.1e-123 444.5 426 52.6
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 9.1e-123 444.5 426 52.6
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 2.3e-121 439.9 430 50.9
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 6.6e-121 438.3 464 51.1
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 1.9e-120 436.8 349 59.3
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 7.2e-120 434.9 397 53.4
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.0e-118 429.1 419 49.9
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.5e-117 427.2 348 60.1
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 5.7e-117 425.2 406 50.5
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.2e-115 417.9 335 59.7
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 1.4e-102 377.5 448 43.8
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.6e-98 364.0 427 42.9
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.5e-96 357.5 251 70.5
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 1.2e-95 354.4 493 40.0
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 1.6e-95 354.0 223 75.8
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 6.2e-95 352.1 410 43.9
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 7.6e-85 318.5 210 70.5
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 7.8e-82 308.5 386 43.0
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.1e-72 278.1 185 68.1
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 2.4e-70 270.4 186 66.7
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 9.6e-64 248.4 185 62.7
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 5.8e-61 239.2 186 57.5
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.5e-53 214.5 158 60.1
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 3.7e-47 193.4 103 86.4
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.0e-45 187.6 147 57.1
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.1e-42 177.6 106 77.4
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 3.3e-40 170.2 145 57.9
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 4.3e-40 169.9 167 53.9
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 5.7e-40 169.5 167 53.3
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 5.7e-40 169.5 167 53.3
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.2e-39 167.5 128 60.2
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 2.2e-39 167.5 152 53.9
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.2e-37 161.8 117 65.0
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.5e-37 159.8 117 65.0
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 9.4e-35 152.1 127 60.6
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.6e-34 150.2 120 57.5
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 9.7e-32 142.1 88 75.0
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 1.3e-31 141.7 82 76.8
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 9.4e-27 125.6 72 73.6
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 1.5e-24 118.2 86 60.5
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.4e-24 115.9 80 60.0
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.3e-23 115.2 106 49.1
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 3.7e-23 113.6 83 60.2
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 1.2e-21 108.6 121 51.2
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 4.5e-21 106.7 72 62.5
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-20 105.1 60 70.0
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 8.5e-20 102.4 58 72.4
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 5.4e-14 83.2 81 50.6
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 2.7e-13 80.9 51 70.6
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.2e-12 77.8 51 64.7
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 2.9e-12 77.4 132 35.6
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 1.6e-10 71.6 42 73.8
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 2.7e-10 70.9 42 73.8
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 8.0e-10 69.3 68 54.4
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 4.0e-09 67.0 42 69.0
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 1.5e-08 65.1 97 40.2
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 5.7e-08 63.2 97 39.2
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 4.9e-07 60.1 97 38.1
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 4.9e-07 60.1 37 64.9


User provided reference genes

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