Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01694 Erythranthe guttata HOM05D001415 ORTHO05D001075 7.8e-28 126.3 60 100.0
Gohir.D09G143600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 6.0e-12 73.6 58 67.2
Gorai.006G164900 Gossypium raimondii HOM05D001415 ORTHO05D001075 6.0e-12 73.6 58 67.2
COL.COLO4_26977 Corchorus olitorius HOM05D001415 ORTHO05D001075 5.1e-11 70.5 57 63.2
Gohir.A09G147800 Gossypium hirsutum HOM05D001415 ORTHO05D001075 5.1e-11 70.5 58 65.5
unitig_8.g4710 Utricularia gibba HOM05D001415 ORTHO05D001075 1.1e-10 69.3 40 80.0
Migut.J00518 Erythranthe guttata HOM05D001415 ORTHO05D001075 1.9e-10 68.6 35 85.7
Duzib128G1683 Durio zibethinus HOM05D001415 ORTHO05D001075 3.3e-10 67.8 54 66.7
A09p46240 Brassica napus HOM05D001415 ORTHO05D001075 5.6e-10 67.0 52 59.6
BraA09t40087Z Brassica rapa HOM05D001415 ORTHO05D001075 5.6e-10 67.0 52 59.6
DCAR_020825 Daucus carota HOM05D001415 ORTHO05D001075 7.3e-10 66.6 37 83.8
Gohir.A04G072400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.3e-10 66.6 50 70.0
Gohir.D04G111000 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.3e-10 66.6 50 70.0
Gorai.009G415100 Gossypium raimondii HOM05D001415 ORTHO05D001075 7.3e-10 66.6 50 70.0
Prupe.6G233800 Prunus persica HOM05D001415 ORTHO05D001075 7.3e-10 66.6 48 66.7
GSVIVG01025722001 Vitis vinifera HOM05D001415 ORTHO05D001075 7.3e-10 66.6 40 75.0
MD04G1094700 Malus domestica HOM05D001415 ORTHO05D001075 9.5e-10 66.2 47 66.0
Manes.08G009400 Manihot esculenta HOM05D001415 ORTHO05D001075 9.5e-10 66.2 54 64.8
AT2G36985 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 2.1e-09 65.1 43 69.8
Manes.09G067380 Manihot esculenta HOM05D001415 ORTHO05D001075 2.1e-09 65.1 50 62.0
Sed0022297 Sechium edule HOM05D001415 ORTHO05D001075 2.1e-09 65.1 43 67.4
BcaB01g03804 Brassica carinata HOM05D001415 ORTHO05D001075 2.8e-09 64.7 47 63.8
BcaC01g05622 Brassica carinata HOM05D001415 ORTHO05D001075 2.8e-09 64.7 43 69.8
A03p20360 Brassica napus HOM05D001415 ORTHO05D001075 2.8e-09 64.7 43 69.8
C03p23940 Brassica napus HOM05D001415 ORTHO05D001075 2.8e-09 64.7 43 69.8
A05p08830 Brassica napus HOM05D001415 ORTHO05D001075 3.6e-09 64.3 43 69.8
BolC4t28054H Brassica oleracea HOM05D001415 ORTHO05D001075 3.6e-09 64.3 43 67.4
BraA05t19850Z Brassica rapa HOM05D001415 ORTHO05D001075 3.6e-09 64.3 43 69.8
CANSAT80G1980 Cannabis sativa HOM05D001415 ORTHO05D001075 3.6e-09 64.3 34 85.3
BcaB06g28964 Brassica carinata HOM05D001415 ORTHO05D001075 4.7e-09 63.9 43 67.4
CiPaw.10G130800 Carya illinoinensis HOM05D001415 ORTHO05D001075 4.7e-09 63.9 34 85.3
MD12G1114900 Malus domestica HOM05D001415 ORTHO05D001075 4.7e-09 63.9 45 66.7
RcHm_v2.0_Chr3g0470051 Rosa chinensis HOM05D001415 ORTHO05D001075 4.7e-09 63.9 37 75.7
BraA03t11281Z Brassica rapa HOM05D001415 ORTHO05D001075 6.2e-09 63.5 47 68.1
Carub.0004s1883 Capsella rubella HOM05D001415 ORTHO05D001075 6.2e-09 63.5 43 65.1
CARHR163060 Cardamine hirsuta HOM05D001415 ORTHO05D001075 6.2e-09 63.5 52 61.5
Potri.006G125600 Populus trichocarpa HOM05D001415 ORTHO05D001075 6.2e-09 63.5 53 60.4
BcaB01g00298 Brassica carinata HOM05D001415 ORTHO05D001075 8.1e-09 63.2 52 57.7
BcaB01g00299 Brassica carinata HOM05D001415 ORTHO05D001075 8.1e-09 63.2 52 57.7
BcaC02g07562 Brassica carinata HOM05D001415 ORTHO05D001075 8.1e-09 63.2 43 65.1
BcaC02g07563 Brassica carinata HOM05D001415 ORTHO05D001075 8.1e-09 63.2 43 65.1
BcaC02g07564 Brassica carinata HOM05D001415 ORTHO05D001075 8.1e-09 63.2 43 65.1
BcaC07g39683 Brassica carinata HOM05D001415 ORTHO05D001075 8.1e-09 63.2 52 57.7
C08p28460 Brassica napus HOM05D001415 ORTHO05D001075 8.1e-09 63.2 52 57.7
BolC3t14783H Brassica oleracea HOM05D001415 ORTHO05D001075 8.1e-09 63.2 43 67.4
BolC8t50454H Brassica oleracea HOM05D001415 ORTHO05D001075 8.1e-09 63.2 52 57.7
Lalb_Chr20g0112631 Lupinus albus HOM05D001415 ORTHO05D001075 8.1e-09 63.2 52 57.7
Lalb_Chr25g0289021 Lupinus albus HOM05D001415 ORTHO05D001075 8.1e-09 63.2 35 77.1
Medtr7g101850 Medicago truncatula HOM05D001415 ORTHO05D001075 8.1e-09 63.2 35 77.1
AL4G33230 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 1.1e-08 62.8 43 67.4
BcaB02g09311 Brassica carinata HOM05D001415 ORTHO05D001075 1.1e-08 62.8 35 77.1
BcaC02g11823 Brassica carinata HOM05D001415 ORTHO05D001075 1.1e-08 62.8 43 67.4
BcaC02g11824 Brassica carinata HOM05D001415 ORTHO05D001075 1.1e-08 62.8 43 67.4
C04p10960 Brassica napus HOM05D001415 ORTHO05D001075 1.1e-08 62.8 43 67.4
C04p65620 Brassica napus HOM05D001415 ORTHO05D001075 1.1e-08 62.8 43 62.8
BolC4t22690H Brassica oleracea HOM05D001415 ORTHO05D001075 1.1e-08 62.8 43 67.4
Lj1g0014030 Lotus japonicus HOM05D001415 ORTHO05D001075 1.1e-08 62.8 47 63.8
Psat3g042400 Pisum sativum HOM05D001415 ORTHO05D001075 1.1e-08 62.8 35 77.1
CAN.G900.45 Capsicum annuum HOM05D001415 ORTHO05D001075 1.8e-08 62.0 34 79.4
FAN14G2263 Fragaria x ananassa HOM05D001415 ORTHO05D001075 1.8e-08 62.0 38 71.1
HanXRQChr02g0053421 Helianthus annuus HOM05D001415 ORTHO05D001075 1.8e-08 62.0 34 79.4
TPR.G9363 Trifolium pratense HOM05D001415 ORTHO05D001075 1.8e-08 62.0 34 79.4
HanXRQChr14g0454501 Helianthus annuus HOM05D001415 ORTHO05D001075 2.3e-08 61.6 34 79.4
Lalb_Chr01g0018721 Lupinus albus HOM05D001415 ORTHO05D001075 2.3e-08 61.6 34 79.4
Phvul.001G178700 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 2.3e-08 61.6 34 79.4
SHI12464 Sapria himalayana HOM05D001415 ORTHO05D001075 2.3e-08 61.6 40 65.0
A04p28260 Brassica napus HOM05D001415 ORTHO05D001075 4.0e-08 60.8 47 59.6
Glyma.03G182700 Glycine max HOM05D001415 ORTHO05D001075 4.0e-08 60.8 34 76.5
Glyma.19G183200 Glycine max HOM05D001415 ORTHO05D001075 4.0e-08 60.8 34 76.5
VMungo0720G3116 Vigna mungo HOM05D001415 ORTHO05D001075 4.0e-08 60.8 38 73.7
Lsat_1_v5_gn_2_106661 Lactuca sativa HOM05D001415 ORTHO05D001075 5.2e-08 60.5 37 75.7
Sed0021325 Sechium edule HOM05D001415 ORTHO05D001075 6.8e-08 60.1 34 79.4
CsaV3_6G039840 Cucumis sativus L. HOM05D001415 ORTHO05D001075 8.9e-08 59.7 33 75.8
Glyma.10G057200 Glycine max HOM05D001415 ORTHO05D001075 8.9e-08 59.7 47 59.6
TWI74G0876 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 8.9e-08 59.7 34 76.5
FAN05G3971 Fragaria x ananassa HOM05D001415 ORTHO05D001075 1.5e-07 58.9 30 83.3
THA.LOC109116388 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 1.5e-07 58.9 52 51.9
AL5G34120 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 2.0e-07 58.5 56 51.8
BcaC02g07565 Brassica carinata HOM05D001415 ORTHO05D001075 2.0e-07 58.5 43 62.8
Aa31LG5G22210 Aethionema arabicum HOM05D001415 ORTHO05D001075 3.4e-07 57.8 33 72.7
Glyma.13G143700 Glycine max HOM05D001415 ORTHO05D001075 4.4e-07 57.4 30 80.0
AT3G53232 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 7.6e-07 56.6 56 48.2
Gohir.A11G324200 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.6e-07 56.6 31 80.6
Gohir.D11G343300 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.6e-07 56.6 31 80.6
Gorai.007G373400 Gossypium raimondii HOM05D001415 ORTHO05D001075 7.6e-07 56.6 31 80.6
Manes.10G049900 Manihot esculenta HOM05D001415 ORTHO05D001075 7.6e-07 56.6 50 60.0
Carub.0005s1977 Capsella rubella HOM05D001415 ORTHO05D001075 9.9e-07 56.2 51 54.9
ClCG04G009250 Citrullus lanatus HOM05D001415 ORTHO05D001075 9.9e-07 56.2 33 72.7
Nn2g11570 Nelumbo nucifera HOM05D001415 ORTHO05D001075 1.7e-06 55.5 33 69.7
Potri.008G035900 Populus trichocarpa HOM05D001415 ORTHO05D001075 2.2e-06 55.1 37 64.9
CiPaw.01G269600 Carya illinoinensis HOM05D001415 ORTHO05D001075 2.9e-06 54.7 52 53.8
MD07G1170600 Malus domestica HOM05D001415 ORTHO05D001075 3.7e-06 54.3 51 51.0
Nn2g13768 Nelumbo nucifera HOM05D001415 ORTHO05D001075 3.7e-06 54.3 30 73.3
Ah.08g211680 Amaranthus hybridus HOM05D001415 ORTHO05D001075 4.9e-06 53.9 34 64.7
Lsat_1_v5_gn_6_25220 Lactuca sativa HOM05D001415 ORTHO05D001075 4.9e-06 53.9 33 69.7
Phvul.007G098500 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 4.9e-06 53.9 39 64.1
CSS0026842 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 6.4e-06 53.5 49 53.1


User provided reference genes

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