Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01638 Erythranthe guttata HOM05D003838 ORTHO05D004444 3.4e-101 371.7 193 100.0
Lj9P420T34 Lonicera japonica HOM05D003838 ORTHO05D004444 4.5e-53 211.8 187 57.2
GSVIVG01022417001 Vitis vinifera HOM05D003838 ORTHO05D004444 5.0e-52 208.4 185 56.2
Hma1.2p1_0002F.1_g002170 Hydrangea macrophylla HOM05D003838 ORTHO05D004444 9.4e-51 204.1 187 55.1
Cfa015168 Carpinus fangiana HOM05D003838 ORTHO05D004444 1.8e-49 199.9 187 53.5
TAR376G0719 Trochodendron aralioides HOM05D003838 ORTHO05D004444 6.8e-49 198.0 188 52.7
Actinidia26441 Actinidia chinensis HOM05D003838 ORTHO05D004444 8.8e-49 197.6 194 55.2
CSS0031035 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.5e-48 196.8 194 51.0
DCAR_006535 Daucus carota HOM05D003838 ORTHO05D004444 2.0e-48 196.4 192 53.1
Migut.I00010 Erythranthe guttata HOM05D003838 ORTHO05D004444 4.4e-48 195.3 189 55.0
Nn1g08615 Nelumbo nucifera HOM05D003838 ORTHO05D004444 5.7e-48 194.9 188 52.1
Haze_01511 Corylus avellana HOM05D003838 ORTHO05D004444 7.5e-48 194.5 184 53.3
MBI16_g18329_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 9.7e-48 194.1 187 51.3
MSTRG.23130 Avicennia marina HOM05D003838 ORTHO05D004444 1.7e-47 193.4 188 52.7
CSS0020761 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.7e-47 193.4 194 52.6
CSS0022226 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.7e-47 193.4 194 50.5
CSS0030021 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 2.2e-47 193.0 194 50.5
Oeu016385.1 Olea europaea HOM05D003838 ORTHO05D004444 2.2e-47 193.0 168 60.7
Rhsim05G0049100 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.8e-47 192.6 189 51.3
vmacro23050 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 2.8e-47 192.6 193 52.3
Ciclev10022331m.g Citrus clementina HOM05D003838 ORTHO05D004444 3.7e-47 192.2 188 48.9
Cc07_g02090 Coffea canephora HOM05D003838 ORTHO05D004444 8.3e-47 191.0 190 52.1
Cc06_g03220 Coffea canephora HOM05D003838 ORTHO05D004444 1.4e-46 190.3 191 53.4
Nn5g28129 Nelumbo nucifera HOM05D003838 ORTHO05D004444 1.8e-46 189.9 189 50.3
Peaxi162Scf00201g00019 Petunia axillaris HOM05D003838 ORTHO05D004444 3.1e-46 189.1 189 51.9
QL03p038958 Quercus lobata HOM05D003838 ORTHO05D004444 3.1e-46 189.1 188 49.5
SGA_v2.0_scaffold25G10841 Striga asiatica HOM05D003838 ORTHO05D004444 4.1e-46 188.7 188 53.7
Nitab4.5_0000515g0040 Nicotiana tabacum HOM05D003838 ORTHO05D004444 5.3e-46 188.3 191 51.8
SalBow7G4199 Salvia bowleyana HOM05D003838 ORTHO05D004444 5.3e-46 188.3 186 53.8
MD13G1208600 Malus domestica HOM05D003838 ORTHO05D004444 7.0e-46 188.0 191 50.8
PSO063G7239 Papaver somniferum HOM05D003838 ORTHO05D004444 9.1e-46 187.6 192 51.0
Sed0023259 Sechium edule HOM05D003838 ORTHO05D004444 9.1e-46 187.6 189 50.8
SGA_v2.0_scaffold90G27933 Striga asiatica HOM05D003838 ORTHO05D004444 9.1e-46 187.6 190 51.6
Gorai.011G142700 Gossypium raimondii HOM05D003838 ORTHO05D004444 2.7e-45 186.0 188 50.0
Potri.017G030000 Populus trichocarpa HOM05D003838 ORTHO05D004444 3.5e-45 185.7 197 49.7
SalBow5G3784 Salvia bowleyana HOM05D003838 ORTHO05D004444 3.5e-45 185.7 186 53.2
Gohir.A10G137200 Gossypium hirsutum HOM05D003838 ORTHO05D004444 4.5e-45 185.3 188 49.5
Prupe.1G032600 Prunus persica HOM05D003838 ORTHO05D004444 5.9e-45 184.9 189 49.2
Prupe.3G140200 Prunus persica HOM05D003838 ORTHO05D004444 5.9e-45 184.9 188 51.1
RcHm_v2.0_Chr4g0390961 Rosa chinensis HOM05D003838 ORTHO05D004444 5.9e-45 184.9 192 49.5
RcHm_v2.0_Chr4g0393311 Rosa chinensis HOM05D003838 ORTHO05D004444 5.9e-45 184.9 191 48.2
Thecc.04G179800 Theobroma cacao HOM05D003838 ORTHO05D004444 5.9e-45 184.9 188 48.4
Atru.chr3.1491 Acer truncatum HOM05D003838 ORTHO05D004444 7.7e-45 184.5 193 48.7
Rhsim09G0030300 Rhododendron simsii HOM05D003838 ORTHO05D004444 7.7e-45 184.5 197 49.2
CANSAT78G1384 Cannabis sativa HOM05D003838 ORTHO05D004444 1.0e-44 184.1 193 51.3
CDE06G0074 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.3e-44 183.7 188 50.0
Manes.03G131800 Manihot esculenta HOM05D003838 ORTHO05D004444 1.3e-44 183.7 195 51.3
PSO782G5029 Papaver somniferum HOM05D003838 ORTHO05D004444 1.3e-44 183.7 192 50.0
vmacro01004 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 1.3e-44 183.7 187 51.9
Sabra17G0019500 Salix brachista HOM05D003838 ORTHO05D004444 1.7e-44 183.3 197 50.3
RhsimUnG0118200 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.2e-44 183.0 197 47.7
CsaV3_6G002030 Cucumis sativus L. HOM05D003838 ORTHO05D004444 6.5e-44 181.4 192 48.4
RcHm_v2.0_Chr4g0390901 Rosa chinensis HOM05D003838 ORTHO05D004444 6.5e-44 181.4 192 49.0
Duzib212G0889 Durio zibethinus HOM05D003838 ORTHO05D004444 8.5e-44 181.0 189 46.6
CDE02G1933 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.1e-43 180.6 189 48.7
AUR62028681 Chenopodium quinoa HOM05D003838 ORTHO05D004444 1.1e-43 180.6 191 47.1
Solyc10g079580.2 Solanum lycopersicum HOM05D003838 ORTHO05D004444 1.5e-43 180.3 188 50.5
PGSC0003DMG400002948 Solanum tuberosum HOM05D003838 ORTHO05D004444 1.9e-43 179.9 189 50.8
PGSC0003DMG400029841 Solanum tuberosum HOM05D003838 ORTHO05D004444 1.9e-43 179.9 188 50.0
TAR629G1244 Trochodendron aralioides HOM05D003838 ORTHO05D004444 2.5e-43 179.5 187 49.7
Eucgr.A00080 Eucalyptus grandis HOM05D003838 ORTHO05D004444 3.2e-43 179.1 187 50.3
Sopen10g030220 Solanum pennellii HOM05D003838 ORTHO05D004444 3.2e-43 179.1 188 50.5
AUR62008103 Chenopodium quinoa HOM05D003838 ORTHO05D004444 4.2e-43 178.7 191 46.6
COL.COLO4_07664 Corchorus olitorius HOM05D003838 ORTHO05D004444 5.5e-43 178.3 196 47.4
Peaxi162Scf00970g00146 Petunia axillaris HOM05D003838 ORTHO05D004444 7.2e-43 177.9 191 49.7
FAN17G3077 Fragaria x ananassa HOM05D003838 ORTHO05D004444 9.4e-43 177.6 179 48.6
Manes.15G070000 Manihot esculenta HOM05D003838 ORTHO05D004444 1.2e-42 177.2 195 48.7
CARHR005500 Cardamine hirsuta HOM05D003838 ORTHO05D004444 1.6e-42 176.8 187 48.1
FvH4_4g03700 Fragaria vesca HOM05D003838 ORTHO05D004444 2.1e-42 176.4 179 47.5
FAN12G0299 Fragaria x ananassa HOM05D000189 ORTHO05D000474 2.1e-42 176.4 179 47.5
Nitab4.5_0002208g0080 Nicotiana tabacum HOM05D003838 ORTHO05D004444 4.7e-42 175.3 189 49.7
PGR083G1767 Punica granatum HOM05D003838 ORTHO05D004444 4.7e-42 175.3 195 48.2
Aa31LG1G8370 Aethionema arabicum HOM05D003838 ORTHO05D004444 6.1e-42 174.9 189 47.1
Carub.0001s0533 Capsella rubella HOM05D003838 ORTHO05D004444 6.1e-42 174.9 188 46.8
Aqoxy7G02681 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.4e-41 173.7 189 47.6
Hund09632 Selenicereus undatus HOM05D003838 ORTHO05D004444 1.4e-41 173.7 190 46.3
AL1G15920 Arabidopsis lyrata HOM05D003838 ORTHO05D004444 2.3e-41 172.9 187 45.5
HanXRQChr16g0504861 Helianthus annuus HOM05D003838 ORTHO05D004444 2.3e-41 172.9 192 50.0
PSO210G5426 Papaver somniferum HOM05D003838 ORTHO05D004444 2.3e-41 172.9 191 47.6
arahy.Tifrunner.gnm1.ann1.0B6HPH Arachis hypogaea HOM05D003838 ORTHO05D004444 3.0e-41 172.6 190 44.2
ClCG08G004710 Citrullus lanatus HOM05D003838 ORTHO05D004444 3.0e-41 172.6 189 48.1
arahy.Tifrunner.gnm1.ann1.536K79 Arachis hypogaea HOM05D003838 ORTHO05D004444 4.0e-41 172.2 190 44.2
Nitab4.5_0002162g0060 Nicotiana tabacum HOM05D003838 ORTHO05D004444 4.0e-41 172.2 189 49.2
AT1G05970 Arabidopsis thaliana HOM05D003838 ORTHO05D004444 5.2e-41 171.8 187 43.9
HanXRQChr02g0057691 Helianthus annuus HOM05D003838 ORTHO05D004444 6.8e-41 171.4 193 48.7
EL10Ac5g10613 Beta vulgaris HOM05D003838 ORTHO05D004444 8.8e-41 171.0 192 45.8
HanXRQChr14g0439271 Helianthus annuus HOM05D003838 ORTHO05D004444 1.2e-40 170.6 193 49.2
Phvul.005G032200 Phaseolus vulgaris HOM05D003838 ORTHO05D004444 1.2e-40 170.6 190 44.7
TWI38G0658 Tripterygium wilfordii HOM05D003838 ORTHO05D004444 1.2e-40 170.6 191 45.0
Ah.11g050950 Amaranthus hybridus HOM05D003838 ORTHO05D004444 1.5e-40 170.2 191 44.5
VMungo1080G0233 Vigna mungo HOM05D003838 ORTHO05D004444 1.5e-40 170.2 190 45.3
HanXRQChr02g0057701 Helianthus annuus HOM05D003838 ORTHO05D004444 2.0e-40 169.9 190 48.9
HanXRQChr16g0516761 Helianthus annuus HOM05D003838 ORTHO05D004444 2.0e-40 169.9 192 49.0
Ca_14316_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 3.4e-40 169.1 190 44.7
HanXRQChr01g0021151 Helianthus annuus HOM05D003838 ORTHO05D004444 3.4e-40 169.1 192 49.5
Sopen04g016270 Solanum pennellii HOM05D003838 ORTHO05D004444 5.7e-40 168.3 160 53.8
HanXRQChr10g0305171 Helianthus annuus HOM05D003838 ORTHO05D004444 9.8e-40 167.5 192 49.0
RcHm_v2.0_Chr4g0390871 Rosa chinensis HOM05D003838 ORTHO05D004444 9.8e-40 167.5 181 47.5
unitig_750.g28470 Utricularia gibba HOM05D003838 ORTHO05D004444 9.8e-40 167.5 193 47.7
CARHR038440 Cardamine hirsuta HOM05D003838 ORTHO05D004444 1.3e-39 167.2 156 51.9
Lalb_Chr10g0091981 Lupinus albus HOM05D003838 ORTHO05D004444 1.3e-39 167.2 191 43.5
MBI16_g18328_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 1.3e-39 167.2 187 45.5
Nitab4.5_0024579g0010 Nicotiana tabacum HOM05D003838 ORTHO05D004444 1.3e-39 167.2 191 48.2
Sc20g0000750 Simmondsia chinensis HOM05D003838 ORTHO05D004444 1.7e-39 166.8 191 45.0
Glyma.11G081600 Glycine max HOM05D003838 ORTHO05D004444 2.2e-39 166.4 190 44.2
FAN12G3313 Fragaria x ananassa HOM05D003838 ORTHO05D004444 2.8e-39 166.0 193 46.6
Medtr7g090650 Medicago truncatula HOM05D003838 ORTHO05D004444 2.8e-39 166.0 192 42.7
QL10p048766 Quercus lobata HOM05D003838 ORTHO05D004444 2.8e-39 166.0 196 42.3
Lj5P157T23 Lonicera japonica HOM05D003838 ORTHO05D004444 3.7e-39 165.6 143 53.8
Psat5g216120 Pisum sativum HOM05D003838 ORTHO05D004444 4.9e-39 165.2 190 44.2
Lj3g0022900 Lotus japonicus HOM05D003838 ORTHO05D004444 6.3e-39 164.9 190 44.2
Aqoxy7G02974 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 8.3e-39 164.5 189 46.6
Medtr3g021420 Medicago truncatula HOM05D003838 ORTHO05D004444 8.3e-39 164.5 190 42.6
C05p04300 Brassica napus HOM05D003838 ORTHO05D004444 1.1e-38 164.1 189 41.3
HanXRQChr12g0355781 Helianthus annuus HOM05D003838 ORTHO05D004444 1.1e-38 164.1 190 47.9
Medtr3g030930 Medicago truncatula HOM05D003838 ORTHO05D004444 1.1e-38 164.1 190 43.2
A10p04640 Brassica napus HOM05D003838 ORTHO05D004444 1.4e-38 163.7 192 41.1
Thhalv10008811m.g Eutrema salsugineum HOM05D003838 ORTHO05D004444 1.4e-38 163.7 195 45.1
FvH4_4g02890 Fragaria vesca HOM05D003838 ORTHO05D004444 1.4e-38 163.7 193 46.1
BolC5t29205H Brassica oleracea HOM05D003838 ORTHO05D004444 1.8e-38 163.3 189 41.3
BraA10t42729Z Brassica rapa HOM05D003838 ORTHO05D004444 2.4e-38 162.9 192 40.6
HanXRQChr16g0517051 Helianthus annuus HOM05D003838 ORTHO05D004444 2.4e-38 162.9 193 48.2
Hund02940 Selenicereus undatus HOM05D003838 ORTHO05D004444 5.4e-38 161.8 191 45.5
MELO3C008320.2 Cucumis melo HOM05D003838 ORTHO05D004444 7.0e-38 161.4 236 39.8
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 9.1e-38 161.0 191 44.0
ECA238G0498 Erigeron canadensis HOM05D003838 ORTHO05D004444 9.1e-38 161.0 168 51.2
Sp1g04800 Schrenkiella parvula HOM05D003838 ORTHO05D004444 2.0e-37 159.8 192 41.7
ECA246G3227 Erigeron canadensis HOM05D003838 ORTHO05D004444 2.7e-37 159.5 186 47.3
Aqoxy285s002 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 3.5e-37 159.1 173 47.4
TPR.G3853 Trifolium pratense HOM05D003838 ORTHO05D004444 1.3e-36 157.1 190 44.2
Lalb_Chr17g0336351 Lupinus albus HOM05D003838 ORTHO05D004444 3.8e-36 155.6 190 43.7
THA.LOC104826203 Tarenaya hassleriana HOM05D003838 ORTHO05D004444 3.8e-36 155.6 188 45.2
AUR62011801 Chenopodium quinoa HOM05D003838 ORTHO05D004444 1.9e-35 153.3 194 43.8
Lsat_1_v5_gn_2_85780 Lactuca sativa HOM05D003838 ORTHO05D004444 1.9e-35 153.3 170 47.6
SEGI_03408 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 1.9e-35 153.3 177 44.6
Gohir.D10G129400 Gossypium hirsutum HOM05D003838 ORTHO05D004444 2.5e-35 152.9 142 50.7
ATR0665G504 Amborella trichopoda HOM05D003838 ORTHO05D004444 4.2e-35 152.1 193 43.0
AUR62024648 Chenopodium quinoa HOM05D004658 ORTHO05D005927 4.2e-35 152.1 193 43.0
BcaC05g24315 Brassica carinata HOM05D003838 ORTHO05D004444 2.0e-32 143.3 189 38.6
SEGI_13821 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 3.4e-32 142.5 189 40.7
CiPaw.01G100400 Carya illinoinensis HOM05D003838 ORTHO05D004444 3.7e-31 139.0 142 48.6
Zm00001eb304590 Zea mays HOM05D003838 ORTHO05D004444 8.3e-31 137.9 192 39.1
ATR0665G008 Amborella trichopoda HOM05D003838 ORTHO05D004444 1.1e-30 137.5 144 45.8
arahy.Tifrunner.gnm1.ann1.IZ4F9K Arachis hypogaea HOM05D003838 ORTHO05D004444 1.1e-30 137.5 191 40.8
Os09g0111800 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 1.1e-30 137.5 192 42.2
Os04g0689700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 1.8e-30 136.7 192 41.7
Os07g0256200 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 2.4e-30 136.3 182 37.9
Zm00001eb076310 Zea mays HOM05D003838 ORTHO05D004444 4.1e-30 135.6 191 40.3
Sp1g04950 Schrenkiella parvula HOM05D003838 ORTHO05D004444 5.4e-30 135.2 192 39.6
vmacro04174 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 7.0e-30 134.8 158 46.8
Zm00001eb076930 Zea mays HOM05D003838 ORTHO05D004444 7.0e-30 134.8 191 40.3
CDE08G0678 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 4.6e-29 132.1 125 49.6
Ca_25969_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 1.5e-27 127.1 168 42.3
EL10As5g23534 Beta vulgaris HOM05D003838 ORTHO05D004444 1.2e-26 124.0 188 41.0
Os02g0669700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 2.8e-26 122.9 191 39.3
Rhsim12G0057800 Rhododendron simsii HOM05D003838 ORTHO05D004444 4.7e-26 122.1 157 43.3
HPP92_001929 Vanilla planifolia HOM05D003838 ORTHO05D004444 3.1e-25 119.4 190 37.9
Ca_24199_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 1.2e-24 117.5 131 44.3
Ca_24671_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 2.6e-24 116.3 142 39.4
PSO832G2359 Papaver somniferum HOM05D003838 ORTHO05D004444 7.5e-24 114.8 191 38.7
FAN22G1473 Fragaria x ananassa HOM05D003838 ORTHO05D004444 6.4e-23 111.7 117 48.7
RcHm_v2.0_Chr4g0390851 Rosa chinensis HOM05D003838 ORTHO05D004444 1.9e-22 110.2 109 51.4
Cpa.g.sc71.4 Carica papaya HOM05D003838 ORTHO05D004444 2.7e-21 106.3 126 42.9
Sopen04g016210 Solanum pennellii HOM05D003838 ORTHO05D004444 4.9e-15 85.5 82 53.7
CDE08G1258 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.2e-13 80.9 188 31.9
MD16G1210800 Malus domestica HOM05D003838 ORTHO05D004444 1.6e-13 80.5 108 44.4
Rhsim12G0009000 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.1e-13 80.1 193 30.1
CBR_g15988 Chara braunii HOM05D003838 ORTHO05D004444 1.3e-12 77.4 209 29.7
FAN17G0891 Fragaria x ananassa HOM05D003838 ORTHO05D004444 3.9e-12 75.9 102 49.0
CBR_g31525 Chara braunii HOM05D003838 ORTHO05D004444 8.6e-12 74.7 203 28.1
Pp3c10_5570 Physcomitrium patens HOM05D003838 ORTHO05D004444 2.5e-11 73.2 158 34.2
Peaxi162Scf01029g00016 Petunia axillaris HOM05D003838 ORTHO05D004444 1.2e-10 70.9 60 55.0
Actinidia06873 Actinidia chinensis HOM05D003838 ORTHO05D004444 1.4e-09 67.4 193 32.6
Solyc04g040053.1 Solanum lycopersicum HOM05D003838 ORTHO05D004444 2.3e-09 66.6 164 31.7
Solyc04g040010.3 Solanum lycopersicum HOM05D003838 ORTHO05D004444 2.2e-07 60.1 76 43.4
Mapoly0037s0121 Marchantia polymorpha HOM05D003838 ORTHO05D004444 2.4e-06 56.6 195 28.2


User provided reference genes

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