Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.6e-97 359.4 172 100.0
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 7.3e-63 244.2 172 71.5
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.3e-59 233.4 169 70.4
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 3.3e-55 218.8 178 63.5
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.6e-54 216.5 160 68.1
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.4e-53 213.4 171 62.6
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 6.9e-53 211.1 165 63.6
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 9.0e-53 210.7 171 61.4
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.6e-52 209.1 162 63.6
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 1.3e-51 206.8 176 61.9
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 1.7e-51 206.5 124 78.2
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 2.2e-51 206.1 161 65.2
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.9e-51 205.7 171 62.0
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 4.9e-51 204.9 165 62.4
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 6.4e-51 204.5 170 62.9
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 8.4e-51 204.1 171 60.8
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 8.4e-51 204.1 173 63.0
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 1.1e-50 203.8 186 61.3
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.9e-50 203.0 180 60.0
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.9e-50 203.0 136 74.3
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.9e-50 203.0 136 74.3
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.9e-50 203.0 143 69.2
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.9e-50 203.0 171 60.8
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.2e-50 202.2 143 69.2
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.2e-50 201.8 165 61.2
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 7.1e-50 201.1 165 62.4
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 7.1e-50 201.1 112 80.4
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 9.3e-50 200.7 166 62.0
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 9.3e-50 200.7 165 63.6
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.6e-49 199.9 193 56.0
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 2.1e-49 199.5 138 70.3
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 2.1e-49 199.5 112 79.5
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.7e-49 199.1 170 61.8
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 2.7e-49 199.1 121 77.7
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 3.5e-49 198.7 170 61.2
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 3.5e-49 198.7 178 59.6
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 4.6e-49 198.4 170 60.0
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 4.6e-49 198.4 174 59.8
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.0e-49 198.0 165 61.8
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 6.0e-49 198.0 140 68.6
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 7.9e-49 197.6 117 77.8
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.3e-48 196.8 182 58.2
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.8e-48 196.4 161 62.1
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 3.0e-48 195.7 164 61.6
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 3.0e-48 195.7 173 60.1
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 3.9e-48 195.3 112 78.6
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 6.7e-48 194.5 163 60.7
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 8.7e-48 194.1 168 61.3
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.5e-47 193.4 144 65.3
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 1.5e-47 193.4 168 61.3
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.9e-47 193.0 181 57.5
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 2.5e-47 192.6 155 63.9
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 2.5e-47 192.6 167 60.5
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.3e-47 192.2 166 61.4
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 3.3e-47 192.2 122 70.5
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 1.3e-46 190.3 113 74.3
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 1.3e-46 190.3 161 60.2
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.6e-46 189.9 135 66.7
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 2.1e-46 189.5 131 70.2
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 2.1e-46 189.5 173 58.4
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 2.8e-46 189.1 166 57.2
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 2.8e-46 189.1 163 58.3
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 3.7e-46 188.7 135 65.9
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 4.8e-46 188.3 166 58.4
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 4.8e-46 188.3 166 58.4
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 6.2e-46 188.0 113 73.5
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 6.2e-46 188.0 113 74.3
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 8.1e-46 187.6 115 76.5
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 1.1e-45 187.2 173 54.9
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.1e-45 187.2 125 71.2
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 1.4e-45 186.8 166 56.6
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 1.4e-45 186.8 166 56.6
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.4e-45 186.8 167 59.3
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 1.8e-45 186.4 180 53.9
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.8e-45 186.4 166 56.6
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 1.8e-45 186.4 173 57.2
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 2.4e-45 186.0 108 75.0
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 2.4e-45 186.0 108 75.0
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 3.1e-45 185.7 162 56.8
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 4.0e-45 185.3 171 61.4
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 6.9e-45 184.5 106 77.4
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 9.0e-45 184.1 121 69.4
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.2e-44 183.7 154 61.0
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.5e-44 183.3 170 57.6
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.0e-44 183.0 125 66.4
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 2.6e-44 182.6 106 76.4
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 2.6e-44 182.6 170 54.1
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 9.9e-44 180.6 150 64.0
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 9.9e-44 180.6 160 56.9
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 2.2e-43 179.5 108 72.2
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 6.4e-43 177.9 168 58.3
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 8.4e-43 177.6 168 58.3
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 1.4e-42 176.8 106 74.5
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.8e-40 169.9 171 53.8
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 4.3e-39 165.2 188 52.1
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 5.6e-39 164.9 109 67.0
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.8e-38 162.5 103 70.9
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 4.5e-36 155.2 119 63.0
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.0e-35 154.1 119 57.1
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 1.1e-34 150.6 123 53.7
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.9e-34 149.8 108 60.2
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.9e-34 149.8 136 53.7
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.5e-33 145.6 108 59.3
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 4.6e-33 145.2 108 58.3
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.0e-33 144.8 132 53.0
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 6.0e-33 144.8 108 58.3
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 7.9e-33 144.4 133 51.1
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.3e-32 143.7 126 54.0
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.3e-32 142.9 107 56.1
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 2.3e-32 142.9 108 56.5
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 2.3e-32 142.9 108 56.5
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.0e-32 142.5 107 57.0
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 3.9e-32 142.1 108 56.5
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 5.1e-32 141.7 104 58.7
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 1.5e-31 140.2 108 54.6
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.5e-31 140.2 168 44.0
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.9e-31 139.8 108 52.8
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.9e-31 139.8 106 54.7
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 3.3e-31 139.0 110 52.7
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 4.3e-31 138.7 108 55.6
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 4.3e-31 138.7 107 56.1
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 4.3e-31 138.7 108 54.6
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 4.3e-31 138.7 106 54.7
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 7.4e-31 137.9 110 52.7
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 9.7e-31 137.5 104 56.7
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 9.7e-31 137.5 167 43.7
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 9.7e-31 137.5 108 52.8
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 1.3e-30 137.1 129 51.2
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 2.8e-30 136.0 121 53.7
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 2.8e-30 136.0 170 43.5
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 4.8e-30 135.2 161 47.8
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 4.8e-30 135.2 105 58.1
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 6.3e-30 134.8 107 53.3
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 8.2e-30 134.4 107 55.1
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 1.1e-29 134.0 107 57.0
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.1e-29 134.0 106 54.7
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.4e-29 133.7 108 50.9
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.8e-29 133.3 104 53.8
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.1e-29 132.5 109 52.3
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.1e-29 132.1 109 52.3
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 1.5e-28 130.2 132 48.5
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 3.4e-28 129.0 109 50.5
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.4e-28 129.0 109 50.5
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.9e-28 128.3 169 40.2
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.3e-27 127.1 109 50.5
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 2.9e-27 125.9 150 43.3
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.9e-27 125.9 95 57.9
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 3.8e-27 125.6 147 46.3
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.1e-26 124.0 123 47.2
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.9e-26 123.2 160 40.6
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 4.2e-26 122.1 104 51.9
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 9.3e-26 120.9 135 45.9
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.6e-25 120.2 106 52.8
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.7e-25 119.4 103 54.4
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 4.6e-25 118.6 59 84.7
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 6.1e-25 118.2 109 48.6
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.3e-24 117.1 61 82.0
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 3.0e-24 115.9 115 48.7
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 3.0e-24 115.9 115 48.7
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 4.1e-21 105.5 250 30.0
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 5.3e-21 105.1 98 57.1
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 6.9e-21 104.8 53 83.0
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 9.1e-21 104.4 93 50.5
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 1.2e-20 104.0 59 74.6
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 2.2e-19 99.8 111 45.0
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.9e-18 96.7 273 27.5
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 1.8e-16 90.1 165 37.6
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 3.0e-16 89.4 61 60.7
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 6.9e-13 78.2 102 42.2
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.7e-11 73.6 77 46.8
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 1.1e-10 70.9 98 35.7
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 3.6e-09 65.9 65 47.7
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 5.2e-08 62.0 112 40.2
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 6.7e-08 61.6 52 48.1
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 1.1e-07 60.8 47 55.3
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 2.0e-07 60.1 104 35.6
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 3.3e-07 59.3 48 50.0
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 7.4e-07 58.2 37 73.0
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 2.8e-06 56.2 51 47.1
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 3.7e-06 55.8 48 50.0


User provided reference genes

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