Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 2.5e-191 672.2 397 100.0
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 3.4e-111 406.0 303 73.9
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.1e-109 401.0 296 73.6
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.1e-109 399.4 302 71.9
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 2.0e-108 396.7 296 73.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 6.6e-107 391.7 290 72.1
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.5e-106 390.6 310 69.7
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.6e-105 387.1 307 69.1
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.8e-105 386.3 297 66.0
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.1e-105 385.2 297 66.3
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 6.8e-104 381.7 297 66.0
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 1.5e-103 380.6 295 69.2
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 2.0e-103 380.2 287 72.1
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 5.7e-103 378.6 341 66.0
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.2e-102 376.7 288 69.8
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 8.3e-102 374.8 294 68.0
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 8.3e-102 374.8 286 69.9
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.2e-101 372.9 319 66.1
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 7.0e-101 371.7 291 67.4
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 2.0e-100 370.2 287 69.3
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.3e-99 367.5 295 68.5
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.7e-99 367.1 293 63.5
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 3.9e-99 365.9 291 67.7
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.5e-98 364.0 293 64.5
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.9e-98 363.6 295 67.1
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 4.3e-98 362.5 301 65.4
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 9.5e-98 361.3 312 62.8
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 9.5e-98 361.3 314 67.8
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.2e-97 360.9 285 68.4
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.2e-97 360.9 268 66.4
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.7e-97 359.0 280 70.7
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 1.0e-96 357.8 298 65.4
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 6.8e-96 355.1 297 65.7
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 2.0e-95 353.6 272 75.0
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 5.8e-95 352.1 286 64.7
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 5.8e-95 352.1 233 77.3
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 7.5e-95 351.7 304 63.8
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.7e-94 350.5 305 64.3
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 2.9e-94 349.7 301 64.1
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 3.7e-94 349.4 292 61.6
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 4.9e-94 349.0 295 65.4
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.1e-93 347.8 295 64.1
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.1e-93 347.8 292 64.7
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.9e-93 347.1 287 65.9
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.4e-93 346.7 290 63.8
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.4e-93 346.7 300 64.0
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 2.4e-93 346.7 300 64.3
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 3.2e-93 346.3 292 65.4
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 3.2e-93 346.3 290 64.8
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 7.0e-93 345.1 301 63.1
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 7.0e-93 345.1 289 65.1
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 9.2e-93 344.7 291 63.6
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.0e-92 343.6 247 71.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 6.0e-92 342.0 291 62.9
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 1.0e-91 341.3 300 62.0
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 1.7e-91 340.5 290 64.1
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 2.3e-91 340.1 265 69.1
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.1e-90 337.8 335 57.0
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.5e-90 337.4 303 61.1
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 7.3e-90 335.1 245 71.0
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.2e-89 334.3 279 65.9
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 2.8e-89 333.2 242 71.9
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 4.7e-89 332.4 237 72.2
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.8e-88 330.5 312 58.0
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 5.2e-88 328.9 308 63.6
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 6.8e-88 328.6 318 58.2
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 7.5e-87 325.1 224 76.3
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 7.5e-87 325.1 233 72.5
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.1e-84 317.0 224 71.9
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 3.5e-84 316.2 250 73.6
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.1e-83 312.4 276 64.1
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.5e-82 310.8 224 72.8
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.5e-82 310.8 266 63.9
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 2.4e-77 293.5 242 60.3
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 9.2e-77 291.6 242 65.7
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 2.1e-76 290.4 242 65.7
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.5e-74 284.3 236 63.1
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 7.3e-74 282.0 293 54.9
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 9.3e-69 265.0 206 68.0
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 8.7e-67 258.5 210 67.6
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.5e-66 257.7 206 71.8
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 2.6e-63 246.9 156 77.6
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 9.3e-61 238.4 162 75.3
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.3e-54 218.0 249 51.0
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.7e-54 217.6 242 51.7
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 5.4e-53 212.6 190 64.2
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 4.6e-52 209.5 193 61.7
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.3e-50 203.4 136 77.2
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 8.2e-41 172.2 181 53.0
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 7.6e-39 165.6 233 40.3
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.3e-35 154.8 109 75.2
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.5e-31 139.8 82 80.5
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 4.5e-31 139.8 155 48.4
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.8e-24 117.9 78 80.8


User provided reference genes

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