Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 3.0e-168 595.1 303 100.0
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.3e-146 520.4 303 86.5
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 3.5e-145 518.5 303 86.1
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 5.1e-144 514.6 299 85.3
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.6e-142 509.6 295 85.4
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.0e-140 502.7 301 82.7
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.2e-137 493.4 299 82.3
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 81.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 80.2
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 4.6e-137 491.5 303 79.9
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 6.1e-137 491.1 303 79.9
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 7.9e-137 490.7 299 81.3
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.8e-136 489.6 299 79.6
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.8e-136 489.6 302 81.1
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 79.5
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 79.5
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 8.7e-136 487.3 299 79.9
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 8.7e-136 487.3 299 80.9
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 8.7e-136 487.3 299 79.3
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.5e-135 485.7 303 79.5
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 3.3e-135 485.3 299 78.9
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.3e-135 485.0 303 79.2
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.3e-134 483.4 303 79.2
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.6e-134 483.0 303 77.9
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.2e-134 482.6 303 78.5
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 3.7e-134 481.9 303 79.2
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 3.7e-134 481.9 299 78.3
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 6.3e-134 481.1 303 78.2
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 6.3e-134 481.1 299 77.3
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.1e-133 480.3 302 78.8
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.1e-133 480.3 299 78.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.4e-133 479.2 303 77.9
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 3.1e-133 478.8 299 79.3
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.1e-133 478.8 299 79.3
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 5.3e-133 478.0 299 79.3
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 6.9e-133 477.6 299 78.6
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 6.9e-133 477.6 303 77.2
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 9.1e-133 477.2 299 78.9
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 9.1e-133 477.2 299 78.9
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.2e-132 476.9 299 77.6
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.2e-132 476.9 299 77.6
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 2.0e-132 476.1 299 78.3
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.6e-132 475.7 299 78.9
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 4.5e-132 474.9 303 77.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 5.9e-132 474.6 299 76.3
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 7.7e-132 474.2 299 77.9
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.3e-131 473.4 299 77.9
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.3e-131 473.4 299 77.9
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.3e-131 473.4 299 78.3
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.9e-131 472.2 306 77.8
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 5.0e-131 471.5 299 76.3
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.5e-131 471.1 299 76.9
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.5e-131 471.1 299 76.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.4e-130 469.9 299 76.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.1e-129 466.1 299 76.3
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.1e-129 466.1 299 76.3
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 3.0e-128 462.2 299 75.3
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.7e-128 461.1 303 76.9
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.5e-127 459.9 303 75.2
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.7e-126 456.4 301 75.1
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 3.7e-126 455.3 300 75.0
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 6.3e-126 454.5 306 75.5
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 6.3e-126 454.5 299 76.3
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 8.2e-126 454.1 301 76.4
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 9.1e-125 450.7 301 74.8
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.2e-124 450.3 302 74.8
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.9e-123 445.7 299 73.6
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.0e-120 437.2 301 71.4
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.9e-120 435.3 301 72.8
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 8.8e-120 434.1 311 71.1
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 7.4e-119 431.0 287 74.2
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 7.4e-119 431.0 298 70.5
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 3.7e-118 428.7 302 72.5
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 4.8e-118 428.3 298 69.8
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 4.8e-118 428.3 275 76.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 6.3e-118 427.9 298 70.8
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 8.2e-118 427.6 298 70.5
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 8.2e-118 427.6 298 70.1
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 8.2e-118 427.6 302 72.5
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.4e-117 426.0 299 71.2
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.1e-117 425.6 298 70.8
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 3.1e-117 425.6 298 70.1
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 4.1e-117 425.2 301 73.4
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 5.3e-117 424.9 298 70.5
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 5.3e-117 424.9 298 70.5
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 5.3e-117 424.9 298 69.5
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.6e-116 423.3 298 69.5
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 3.5e-116 422.2 298 69.5
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 4.5e-116 421.8 298 70.1
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 5.9e-116 421.4 298 70.5
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 2.2e-115 419.5 298 69.1
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 2.2e-115 419.5 298 69.1
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 2.2e-115 419.5 298 69.1
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.8e-115 418.7 298 69.8
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.6e-113 413.3 299 69.6
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.8e-112 409.8 251 79.7
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 7.0e-109 397.9 246 80.1
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 4.2e-106 388.7 300 65.0
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.3e-104 382.9 225 82.7
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.0e-103 379.8 221 84.2
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.3e-102 377.1 234 79.5
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.4e-101 373.6 299 63.5
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.1e-101 372.5 261 72.8
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.0e-96 357.5 225 76.0
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 9.8e-95 350.9 304 57.6
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 4.9e-94 348.6 248 68.5
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 8.3e-94 347.8 218 79.8
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.4e-93 347.1 234 72.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 5.9e-92 341.7 211 77.7
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.3e-91 340.5 277 61.4
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 5.0e-91 338.6 254 65.7
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.3e-78 297.4 339 50.1
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 8.3e-78 294.7 299 55.2
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.2e-71 274.2 173 75.7
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.4e-61 240.7 317 45.1
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 3.5e-52 209.5 143 74.8
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 4.5e-47 192.6 163 58.9
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.3e-41 174.5 343 34.4
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 5.3e-40 169.1 177 50.8
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 6.9e-40 168.7 105 80.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 1.9e-37 160.6 299 36.8
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.5e-31 141.0 88 71.6
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 7.9e-28 128.6 91 70.3
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.9e-26 124.0 86 76.7
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 5.7e-26 122.5 348 31.9
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 1.6e-25 120.9 94 70.2
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 5.3e-24 115.9 72 73.6
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.5e-23 114.4 142 49.3
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 3.7e-17 93.2 64 75.0
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.4e-15 86.7 60 60.0
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 1.5e-10 71.2 42 76.2


User provided reference genes

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