Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01170 Erythranthe guttata HOM05D000042 ORTHO05D045290 9.4e-53 209.9 106 100.0
MSTRG.7731 Avicennia marina HOM05D000042 ORTHO05D000028 6.4e-17 90.9 106 57.5
SalBow2G0544 Salvia bowleyana HOM05D000042 ORTHO05D045290 3.0e-14 82.0 100 52.0
Dinv34042 Davidia involucrata HOM05D000042 ORTHO05D000028 7.3e-13 77.4 102 46.1
Dinv34183 Davidia involucrata HOM05D000042 ORTHO05D000028 7.3e-13 77.4 102 46.1
MSTRG.2294 Avicennia marina HOM05D000042 ORTHO05D000028 9.5e-13 77.0 107 49.5
MSTRG.13458 Avicennia marina HOM05D000042 ORTHO05D000028 2.8e-12 75.5 104 46.2
Cc11_g11720 Coffea canephora HOM05D000042 ORTHO05D000028 5.2e-11 71.2 102 45.1
Nitab4.5_0006437g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000028 3.4e-10 68.6 102 43.1
Nitab4.5_0002041g0030 Nicotiana tabacum HOM05D000042 ORTHO05D000028 1.7e-09 66.2 104 43.3
GSVIVG01008139001 Vitis vinifera HOM05D000042 ORTHO05D000028 3.8e-09 65.1 104 42.3
Nn4g23508 Nelumbo nucifera HOM05D000042 ORTHO05D000028 4.9e-09 64.7 104 42.3
Peaxi162Scf00365g00212 Petunia axillaris HOM05D000042 ORTHO05D000028 6.4e-09 64.3 105 42.9
Nn3g17516 Nelumbo nucifera HOM05D000042 ORTHO05D000028 2.4e-08 62.4 104 42.3
Cpa.g.sc660.1 Carica papaya HOM05D000042 ORTHO05D000028 3.2e-08 62.0 102 37.3
Psat2g092880 Pisum sativum HOM05D000042 ORTHO05D000028 5.4e-08 61.2 104 38.5
Aqoxy3G00538 Aquilegia oxysepala HOM05D000042 ORTHO05D000028 7.1e-08 60.8 107 36.4
Medtr5g046830 Medicago truncatula HOM05D000042 ORTHO05D000028 7.1e-08 60.8 104 38.5
Atru.chr9.472 Acer truncatum HOM05D000042 ORTHO05D000028 9.2e-08 60.5 104 36.5
GSVIVG01012249001 Vitis vinifera HOM05D000042 ORTHO05D000028 9.2e-08 60.5 104 44.2
Sopen04g001300 Solanum pennellii HOM05D000042 ORTHO05D000028 2.1e-07 59.3 108 40.7
EL10Ac6g14704 Beta vulgaris HOM05D000042 ORTHO05D000028 2.7e-07 58.9 107 39.3
MD06G1204300 Malus domestica HOM05D000042 ORTHO05D000028 2.7e-07 58.9 107 40.2
Solyc04g005320.3 Solanum lycopersicum HOM05D000042 ORTHO05D000028 2.7e-07 58.9 108 40.7
DCAR_007203 Daucus carota HOM05D000042 ORTHO05D000028 3.5e-07 58.5 77 44.2
MD14G1215600 Malus domestica HOM05D000042 ORTHO05D000028 3.5e-07 58.5 107 38.3
Duzib248G1205 Durio zibethinus HOM05D000042 ORTHO05D000028 4.6e-07 58.2 100 37.0
MSTRG.2976 Avicennia marina HOM05D000042 ORTHO05D000028 1.0e-06 57.0 104 38.5
COL.COLO4_05848 Corchorus olitorius HOM05D000042 ORTHO05D000028 1.0e-06 57.0 104 39.4
CiPaw.04G052400 Carya illinoinensis HOM05D000042 ORTHO05D000028 1.7e-06 56.2 105 38.1
Oeu000926.1 Olea europaea HOM05D000042 ORTHO05D000028 2.3e-06 55.8 104 38.5
Eucgr.K02546 Eucalyptus grandis HOM05D000042 ORTHO05D000028 3.0e-06 55.5 105 38.1
PGSC0003DMG400028359 Solanum tuberosum HOM05D000042 ORTHO05D000028 3.0e-06 55.5 109 38.5
SalBow1G6001 Salvia bowleyana HOM05D000042 ORTHO05D000028 3.9e-06 55.1 105 39.0
Cfa007692 Carpinus fangiana HOM05D000042 ORTHO05D000028 6.6e-06 54.3 104 39.4
Nitab4.5_0012101g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000028 6.6e-06 54.3 104 37.5
Thecc.02G326000 Theobroma cacao HOM05D000042 ORTHO05D000028 6.6e-06 54.3 98 34.7
Solyc05g012020.4 Solanum lycopersicum HOM05D000042 ORTHO05D000028 8.6e-06 53.9 103 38.8
GSVIVG01036551001 Vitis vinifera HOM05D000042 ORTHO05D000028 8.6e-06 53.9 103 38.8


User provided reference genes

Program Settings