Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.3e-120 436.4 227 100.0
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 2.4e-101 372.5 227 84.1
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 3.8e-99 365.2 227 82.8
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 5.1e-96 354.8 224 81.7
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 1.1e-95 353.6 257 73.9
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 6.9e-93 344.4 224 77.7
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 5.8e-92 341.3 224 78.6
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 5.8e-92 341.3 224 78.1
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 1.7e-91 339.7 224 75.4
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 2.2e-91 339.3 224 78.1
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 8.4e-91 337.4 224 78.1
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 8.4e-91 337.4 223 76.7
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.9e-90 336.3 224 76.3
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 4.2e-90 335.1 224 76.8
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.2e-89 333.6 224 75.9
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.2e-89 333.6 224 75.9
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.2e-89 333.6 224 75.9
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 2.7e-89 332.4 224 74.6
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 7.8e-89 330.9 234 73.1
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 2.3e-88 329.3 224 73.7
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 3.0e-88 328.9 224 74.6
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 3.0e-88 328.9 224 72.8
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 3.9e-88 328.6 224 75.0
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 5.1e-88 328.2 224 74.1
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 6.6e-88 327.8 264 68.2
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.5e-87 326.6 224 72.3
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 1.5e-87 326.6 224 73.2
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.5e-87 326.6 224 72.8
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 2.5e-87 325.9 224 73.2
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 5.6e-87 324.7 224 72.8
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 7.3e-87 324.3 224 73.7
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 7.3e-87 324.3 224 73.7
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 1.6e-86 323.2 224 73.2
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 2.1e-86 322.8 224 74.1
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 2.1e-86 322.8 227 73.6
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 2.8e-86 322.4 224 74.1
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 4.8e-86 321.6 224 72.8
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 8.1e-86 320.9 224 72.8
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 8.1e-86 320.9 224 71.9
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 8.1e-86 320.9 223 71.7
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 1.4e-85 320.1 214 75.7
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 1.4e-85 320.1 228 72.4
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 1.8e-85 319.7 224 71.4
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 2.4e-85 319.3 224 71.9
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 4.0e-85 318.5 224 71.9
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 6.9e-85 317.8 224 72.8
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.2e-84 317.0 224 71.0
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 2.0e-84 316.2 224 72.3
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 5.8e-84 314.7 225 71.6
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 2.2e-83 312.8 224 71.9
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 2.9e-83 312.4 224 72.3
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 6.4e-83 311.2 207 74.9
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 6.4e-83 311.2 224 71.0
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 1.1e-82 310.5 224 71.0
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 1.9e-82 309.7 224 69.6
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.9e-82 309.7 224 70.5
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.9e-82 309.7 224 70.5
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 3.2e-82 308.9 224 72.3
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 5.4e-82 308.1 224 70.5
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 2.1e-81 306.2 224 71.4
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 2.7e-81 305.8 207 75.8
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 6.7e-80 301.2 224 68.8
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 6.7e-80 301.2 224 67.4
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 6.7e-80 301.2 202 74.8
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 1.1e-79 300.4 224 68.3
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 1.1e-79 300.4 224 67.9
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.5e-79 300.1 220 69.5
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 9.6e-79 297.4 224 67.0
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 9.6e-79 297.4 224 70.1
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 1.3e-78 297.0 224 66.5
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.3e-78 297.0 227 68.3
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 1.4e-77 293.5 221 67.9
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 4.0e-77 292.0 224 65.6
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.0e-77 292.0 241 64.7
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 5.3e-77 291.6 224 69.2
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 9.0e-77 290.8 249 62.2
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 1.5e-76 290.0 224 67.9
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 5.8e-76 288.1 224 65.2
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 5.8e-76 288.1 194 76.8
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.3e-75 287.0 220 67.3
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.9e-75 285.8 232 65.5
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 6.5e-75 284.6 224 66.1
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 8.4e-75 284.3 224 65.6
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.1e-74 283.9 224 65.2
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 2.5e-74 282.7 224 64.3
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 2.5e-74 282.7 224 64.3
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.2e-73 280.4 224 63.8
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.2e-73 280.4 224 63.8
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.2e-73 280.4 224 63.8
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 1.0e-72 277.3 207 66.7
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.0e-72 277.3 224 65.2
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 5.7e-71 271.6 239 62.8
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 1.3e-70 270.4 224 61.2
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 8.2e-70 267.7 195 73.3
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 1.2e-68 263.8 222 63.1
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 1.2e-68 263.8 222 63.1
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 5.8e-68 261.5 222 62.2
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.0e-67 260.8 214 62.6
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 2.9e-67 259.2 199 66.8
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 4.2e-66 255.4 210 62.4
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 9.3e-66 254.2 224 59.4
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 1.2e-60 237.3 224 58.0
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.2e-60 237.3 193 63.2
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 4.5e-60 235.3 207 57.0
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 3.8e-59 232.3 221 52.0
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 4.1e-53 212.2 215 50.7
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 7.2e-50 201.4 184 60.9
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 7.2e-50 201.4 139 70.5
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 4.0e-40 169.1 188 45.2
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 7.5e-39 164.9 210 50.0
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 2.3e-32 143.3 97 70.1
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 4.8e-30 135.6 164 50.0
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.7e-27 127.1 91 74.7
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 2.3e-19 100.1 220 31.4
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 1.5e-18 97.4 214 28.5
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.1e-13 81.3 231 29.9
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 5.2e-08 62.4 106 44.3
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 1.5e-07 60.8 95 43.2


User provided reference genes

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