Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 9.3e-89 330.1 157 100.0
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.5e-86 322.0 157 96.2
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 2.5e-62 242.3 159 72.3
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 2.0e-59 232.6 157 73.9
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 1.0e-58 230.3 171 69.0
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 2.1e-56 222.6 157 65.0
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 9.4e-49 197.2 112 75.0
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 1.2e-48 196.8 143 64.3
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 3.6e-48 195.3 157 58.6
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 1.0e-47 193.7 123 72.4
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 2.3e-47 192.6 156 59.6
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.1e-46 190.3 122 72.1
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 2.6e-46 189.1 113 72.6
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 3.3e-46 188.7 124 66.1
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 3.3e-46 188.7 145 60.7
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 4.4e-46 188.3 145 61.4
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 5.7e-46 188.0 122 68.9
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 1.3e-45 186.8 116 70.7
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 3.7e-45 185.3 114 71.1
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 3.7e-45 185.3 146 65.1
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 4.8e-45 184.9 147 59.2
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 6.3e-45 184.5 111 74.8
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 8.2e-45 184.1 136 62.5
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 2.4e-44 182.6 113 71.7
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 4.1e-44 181.8 130 63.8
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 4.1e-44 181.8 125 68.8
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 4.1e-44 181.8 116 68.1
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 4.1e-44 181.8 139 60.4
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 5.3e-44 181.4 147 57.8
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 5.3e-44 181.4 111 72.1
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 9.1e-44 180.6 111 71.2
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 2.0e-43 179.5 116 69.8
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 2.6e-43 179.1 111 70.3
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 3.4e-43 178.7 111 70.3
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 4.5e-43 178.3 122 66.4
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.5e-43 178.3 110 75.5
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 7.7e-43 177.6 111 69.4
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 1.0e-42 177.2 128 65.6
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 1.3e-42 176.8 111 68.5
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.3e-42 176.8 144 58.3
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 1.7e-42 176.4 120 65.0
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 2.9e-42 175.6 111 69.4
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 3.8e-42 175.3 121 68.6
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 5.0e-42 174.9 111 68.5
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 5.0e-42 174.9 111 68.5
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 6.5e-42 174.5 109 71.6
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 6.5e-42 174.5 109 71.6
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 6.5e-42 174.5 111 71.2
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 6.5e-42 174.5 156 56.4
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 8.5e-42 174.1 134 61.9
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.5e-42 174.1 134 61.9
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.5e-42 174.1 134 61.9
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 8.5e-42 174.1 123 63.4
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.1e-41 173.7 109 71.6
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.1e-41 173.7 131 62.6
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 1.1e-41 173.7 111 67.6
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.4e-41 173.3 111 70.3
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 2.5e-41 172.6 116 68.1
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 2.5e-41 172.6 113 68.1
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 2.5e-41 172.6 154 54.5
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 3.2e-41 172.2 111 67.6
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 3.2e-41 172.2 155 53.5
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 3.2e-41 172.2 133 60.9
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 4.2e-41 171.8 111 70.3
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 4.2e-41 171.8 111 69.4
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 4.2e-41 171.8 110 69.1
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 7.2e-41 171.0 110 69.1
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 1.2e-40 170.2 110 69.1
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.6e-40 169.9 113 67.3
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.6e-40 169.9 111 68.5
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 2.7e-40 169.1 111 67.6
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 7.9e-40 167.5 122 61.5
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 1.4e-39 166.8 121 62.8
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 2.3e-39 166.0 137 56.9
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 3.0e-39 165.6 110 66.4
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 3.0e-39 165.6 110 67.3
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 3.9e-39 165.2 110 65.5
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 3.9e-39 165.2 110 66.4
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 3.9e-39 165.2 149 55.0
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 3.9e-39 165.2 113 63.7
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 5.2e-39 164.9 111 65.8
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 6.7e-39 164.5 116 64.7
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 6.7e-39 164.5 155 52.3
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 6.7e-39 164.5 155 52.3
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 8.8e-39 164.1 111 65.8
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 2.0e-38 162.9 121 62.0
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 2.6e-38 162.5 154 52.6
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 5.7e-38 161.4 138 54.3
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 5.7e-38 161.4 154 51.3
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 7.4e-38 161.0 121 61.2
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 7.4e-38 161.0 121 61.2
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 2.2e-37 159.5 149 52.3
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 2.8e-37 159.1 110 63.6
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 3.1e-36 155.6 137 55.5
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 4.5e-35 151.8 111 60.4
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 5.9e-35 151.4 186 44.1
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 7.7e-35 151.0 122 60.7
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 1.3e-34 150.2 115 58.3
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 2.9e-34 149.1 150 49.3
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 3.8e-34 148.7 116 58.6
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 7.2e-33 144.4 141 51.8
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 2.1e-32 142.9 97 64.9
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 3.6e-32 142.1 117 53.0
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 5.3e-28 128.3 110 49.1
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 2.0e-27 126.3 117 49.6
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 2.6e-22 109.4 110 47.3
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 3.7e-21 105.5 97 49.5
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 7.7e-19 97.8 128 40.6
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 1.0e-18 97.4 53 81.1
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.3e-18 97.1 53 75.5
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 1.7e-18 96.7 53 77.4
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 2.9e-18 95.9 61 67.2
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 6.5e-18 94.7 75 58.7
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.2e-16 90.5 91 50.5
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 8.0e-16 87.8 51 72.5
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 3.0e-15 85.9 58 67.2
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 2.0e-14 83.2 50 70.0
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 3.4e-14 82.4 48 70.8
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 2.2e-13 79.7 51 64.7
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 4.1e-12 75.5 45 68.9
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.7e-10 70.1 48 62.5
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 9.8e-06 54.3 71 38.0


User provided reference genes

Program Settings