Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1304.7 668 100.0
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1178.7 678 92.2
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1100.9 695 83.9
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.6e-214 750.0 699 59.8
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 2.1e-190 669.8 712 54.2
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 1.8e-181 640.2 711 49.8
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 2.3e-181 639.8 655 53.6
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 2.0e-180 636.7 681 51.0
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 9.1e-178 627.9 669 51.9
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 1.5e-175 620.5 629 54.5
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 2.1e-174 616.7 684 51.6
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 8.0e-174 614.8 664 50.6
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 4.4e-172 609.0 651 51.5
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.3e-171 607.4 670 51.3
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.7e-171 607.1 668 51.2
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 8.3e-171 604.7 654 50.0
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.2e-169 600.9 671 50.2
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.2e-169 600.9 676 50.4
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.2e-169 600.9 663 51.3
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 1.6e-169 600.5 741 46.2
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.7e-169 599.7 663 49.5
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 5.9e-169 598.6 672 50.1
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.0e-168 597.8 684 48.7
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.7e-168 597.0 669 50.1
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 6.6e-168 595.1 668 48.4
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.5e-167 594.0 655 49.9
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.5e-167 594.0 659 49.5
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 8.0e-166 588.2 656 49.5
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 3.1e-165 586.3 664 48.0
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 4.0e-165 585.9 646 48.5
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 4.0e-165 585.9 669 50.1
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 5.2e-165 585.5 670 48.5
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 6.8e-165 585.1 624 51.6
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 6.8e-165 585.1 659 49.0
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.0e-164 583.6 657 48.6
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 2.6e-164 583.2 671 48.4
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 3.4e-164 582.8 662 48.0
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 5.8e-164 582.0 671 48.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.3e-163 580.9 651 49.2
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 2.2e-163 580.1 663 48.4
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 4.9e-163 578.9 668 47.6
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 4.9e-163 578.9 644 50.9
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.9e-162 577.0 663 48.9
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 2.4e-162 576.6 665 48.3
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 2.4e-162 576.6 664 48.3
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 4.1e-162 575.9 658 48.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.2e-161 574.3 661 48.4
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.0e-161 573.5 664 48.2
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.6e-161 572.4 664 48.0
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.3e-160 570.9 622 50.5
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.9e-160 569.3 652 48.5
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 7.3e-159 565.1 636 48.6
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.2e-158 564.3 649 48.1
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.2e-158 564.3 649 48.1
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.6e-158 563.9 660 48.2
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.1e-157 561.2 677 49.3
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.8e-157 560.5 648 47.5
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 1.8e-157 560.5 642 47.7
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 3.1e-157 559.7 652 47.9
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 4.0e-157 559.3 663 48.1
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.0e-157 559.3 685 47.9
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 6.8e-157 558.5 628 48.9
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 2.0e-156 557.0 684 46.3
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 2.0e-156 557.0 684 45.6
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 2.6e-156 556.6 652 48.0
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 4.4e-156 555.8 639 47.6
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 4.9e-155 552.4 648 47.7
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 6.4e-155 552.0 679 46.4
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 7.0e-154 548.5 649 48.4
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.6e-153 547.4 661 46.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 2.1e-153 547.0 670 46.1
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 3.5e-153 546.2 651 46.2
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 1.0e-152 544.7 649 48.2
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.1e-149 534.6 690 44.2
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 5.2e-149 532.3 627 48.5
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 2.8e-142 510.0 510 52.5
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 3.5e-137 493.0 659 44.2
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 3.5e-137 493.0 666 44.3
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.1e-135 488.0 626 46.3
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.5e-132 477.6 494 54.9
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.1e-130 471.5 724 42.3
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 4.2e-130 469.5 429 56.4
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 9.3e-130 468.4 437 54.5
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.1e-126 457.2 528 47.7
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 6.2e-126 455.7 652 44.2
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.7e-123 447.6 662 41.4
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 6.2e-118 429.1 599 42.2
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 8.1e-118 428.7 382 56.5
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 2.2e-115 420.6 528 46.0
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.9e-114 417.5 592 41.7
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 3.2e-114 416.8 350 60.6
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.7e-107 394.4 507 45.0
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 5.5e-106 389.4 317 61.2
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 1.2e-97 361.7 639 36.0
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.0e-95 354.4 314 56.4
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 4.3e-95 353.2 304 56.9
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.1e-93 348.6 290 60.7
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.9e-90 337.8 336 54.5
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.0e-88 332.0 703 34.1
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.2e-81 308.5 388 48.2
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 8.8e-72 275.8 613 32.8
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.6e-65 255.0 377 43.2
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 5.9e-60 236.5 378 41.3
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.7e-59 235.0 598 30.4
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 7.5e-55 219.5 549 29.9
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 2.3e-51 208.0 332 39.8
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.4e-48 198.7 303 42.6
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.8e-48 198.4 222 50.9
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 4.6e-44 183.7 152 56.6
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 4.7e-41 173.7 138 64.5
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 6.8e-40 169.9 405 33.8
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-37 162.5 252 39.3
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 8.6e-35 152.9 126 57.9
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 4.3e-34 150.6 328 32.6
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 2.3e-32 144.8 128 55.5
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 8.4e-30 136.3 197 41.6
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.1e-26 125.9 148 43.2
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.3e-26 124.0 260 36.9
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.5e-23 115.5 147 46.9
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 9.6e-18 96.3 115 49.6
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 3.6e-17 94.4 81 61.7
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.0e-15 88.6 131 38.9
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.7e-14 85.5 52 71.2
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.4e-13 82.4 84 51.2
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 3.5e-12 77.8 301 23.9
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 3.0e-11 74.7 219 26.5
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 1.9e-10 72.0 284 23.9
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.8e-08 65.5 67 43.3


User provided reference genes

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