Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01251 Erythranthe guttata HOM05D005629 ORTHO05D008000 7.7e-89 330.5 171 100.0
Migut.H00778 Erythranthe guttata HOM05D005629 ORTHO05D008000 4.6e-65 251.5 162 84.6
Migut.F00066 Erythranthe guttata HOM05D005629 ORTHO05D008000 6.0e-65 251.1 159 85.5
SalBow4G2288 Salvia bowleyana HOM05D005629 ORTHO05D008000 3.6e-62 241.9 159 81.1
Peaxi162Scf00700g00023 Petunia axillaris HOM05D005629 ORTHO05D008000 3.1e-61 238.8 159 78.0
SGA_v2.0_scaffold253G45198 Striga asiatica HOM05D005629 ORTHO05D008000 8.9e-61 237.3 159 78.6
CAN.G1751.5 Capsicum annuum HOM05D005629 ORTHO05D008000 1.5e-60 236.5 159 77.4
Nitab4.5_0000559g0400 Nicotiana tabacum HOM05D005629 ORTHO05D008000 2.0e-60 236.1 159 78.0
Nitab4.5_0005161g0130 Nicotiana tabacum HOM05D005629 ORTHO05D008000 2.6e-60 235.7 159 78.6
Lj1g0025061 Lotus japonicus HOM05D005629 ORTHO05D008000 3.4e-60 235.3 159 77.4
CANSAT64G1539 Cannabis sativa HOM05D005629 ORTHO05D008000 4.4e-60 235.0 159 77.4
PGSC0003DMG400013378 Solanum tuberosum HOM05D005629 ORTHO05D008000 4.4e-60 235.0 159 76.7
CSS0048682 Camellia sinensis var. sinensis HOM05D005629 ORTHO05D004503 9.8e-60 233.8 159 78.6
FAN02G3075 Fragaria x ananassa HOM05D005629 ORTHO05D008000 9.8e-60 233.8 161 76.4
GSVIVG01033097001 Vitis vinifera HOM05D005629 ORTHO05D008000 1.3e-59 233.4 159 78.0
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea HOM05D005629 ORTHO05D008000 2.2e-59 232.6 159 76.7
Cc07_g00800 Coffea canephora HOM05D005629 ORTHO05D008000 2.2e-59 232.6 159 74.8
Oeu058781.1 Olea europaea HOM05D005629 ORTHO05D008000 2.2e-59 232.6 159 76.7
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla HOM05D005629 ORTHO05D008000 3.7e-59 231.9 159 78.0
COL.COLO4_17207 Corchorus olitorius HOM05D005629 ORTHO05D008000 4.9e-59 231.5 159 75.5
unitig_52.g17654 Utricularia gibba HOM05D005629 ORTHO05D008000 6.4e-59 231.1 159 75.5
Atru.chr6.2566 Acer truncatum HOM05D005629 ORTHO05D008000 8.3e-59 230.7 159 76.1
Gohir.D07G235300 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.1e-58 230.3 159 73.6
Solyc03g005000.4 Solanum lycopersicum HOM05D005629 ORTHO05D008000 1.1e-58 230.3 159 74.8
Sopen03g001010 Solanum pennellii HOM05D005629 ORTHO05D008000 1.1e-58 230.3 159 74.8
Gohir.A11G064500 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.4e-58 229.9 159 73.0
Phvul.001G094100 Phaseolus vulgaris HOM05D005629 ORTHO05D008000 1.4e-58 229.9 142 82.4
Lalb_Chr14g0363391 Lupinus albus HOM05D005629 ORTHO05D008000 2.4e-58 229.2 142 83.1
Ciclev10015840m.g Citrus clementina HOM05D005629 ORTHO05D008000 3.2e-58 228.8 142 81.7
Eucgr.I01649 Eucalyptus grandis HOM05D005629 ORTHO05D008000 3.2e-58 228.8 159 76.1
Glyma.16G056900 Glycine max HOM05D005629 ORTHO05D008000 3.2e-58 228.8 142 81.7
Gohir.D11G068800 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.2e-58 228.8 159 72.3
QL02p071469 Quercus lobata HOM05D005629 ORTHO05D008000 3.2e-58 228.8 159 74.8
Actinidia36200 Actinidia chinensis HOM05D005629 ORTHO05D008000 4.1e-58 228.4 159 76.1
Sc03g0006560 Simmondsia chinensis HOM05D005629 ORTHO05D008000 7.1e-58 227.6 159 74.2
VMungo1383G2395 Vigna mungo HOM05D005629 ORTHO05D008000 7.1e-58 227.6 142 81.7
Dinv33339 Davidia involucrata HOM05D005629 ORTHO05D008000 9.2e-58 227.3 159 75.5
FAN05G5024 Fragaria x ananassa HOM05D005629 ORTHO05D008000 9.2e-58 227.3 159 75.5
FAN09G2642 Fragaria x ananassa HOM05D005629 ORTHO05D008000 9.2e-58 227.3 159 75.5
CiPaw.03G055300 Carya illinoinensis HOM05D005629 ORTHO05D008000 1.2e-57 226.9 159 76.1
Gorai.001G271100 Gossypium raimondii HOM05D005629 ORTHO05D008000 1.2e-57 226.9 160 73.8
Actinidia05920 Actinidia chinensis HOM05D005629 ORTHO05D008000 1.6e-57 226.5 159 76.7
CDE05G1086 Ceratophyllum demersum HOM05D001132 ORTHO05D002510 1.6e-57 226.5 148 76.4
MD09G1011200 Malus domestica HOM05D005629 ORTHO05D008000 1.6e-57 226.5 159 76.7
Cpa.g.sc171.18 Carica papaya HOM05D005629 ORTHO05D008000 2.1e-57 226.1 159 72.3
PSO017G3506 Papaver somniferum HOM05D005629 ORTHO05D008000 2.1e-57 226.1 159 74.2
TWI56G1125 Tripterygium wilfordii HOM05D005629 ORTHO05D008000 2.1e-57 226.1 159 73.6
Gohir.A07G228100 Gossypium hirsutum HOM05D005629 ORTHO05D008000 2.7e-57 225.7 160 73.1
ClCG05G013480 Citrullus lanatus HOM05D005629 ORTHO05D008000 3.5e-57 225.3 159 72.3
FvH4_6g53470 Fragaria vesca HOM05D005629 ORTHO05D008000 3.5e-57 225.3 159 75.5
Manes.15G160600 Manihot esculenta HOM05D005629 ORTHO05D008000 3.5e-57 225.3 159 73.6
Potri.001G330800 Populus trichocarpa HOM05D005629 ORTHO05D008000 3.5e-57 225.3 159 74.2
Haze_14872 Corylus avellana HOM05D005629 ORTHO05D008000 4.6e-57 224.9 159 74.8
Gorai.007G073600 Gossypium raimondii HOM05D005629 ORTHO05D008000 4.6e-57 224.9 160 71.9
Prupe.3G305800 Prunus persica HOM05D005629 ORTHO05D008000 4.6e-57 224.9 159 76.1
RcHm_v2.0_Chr2g0175511 Rosa chinensis HOM05D005629 ORTHO05D008000 4.6e-57 224.9 159 74.8
ECA246G2396 Erigeron canadensis HOM05D005629 ORTHO05D008000 6.0e-57 224.6 159 74.2
Migut.G01029 Erythranthe guttata HOM05D005629 ORTHO05D008000 6.0e-57 224.6 150 84.7
Ah.02g120470 Amaranthus hybridus HOM05D005629 ORTHO05D008000 7.8e-57 224.2 159 72.3
Thecc.04G035600 Theobroma cacao HOM05D005629 ORTHO05D008000 7.8e-57 224.2 160 73.1
Aqoxy3G01541 Aquilegia oxysepala HOM05D005629 ORTHO05D008000 1.3e-56 223.4 159 73.0
Cfa007230 Carpinus fangiana HOM05D005629 ORTHO05D008000 1.3e-56 223.4 159 74.8
MELO3C014882.2 Cucumis melo HOM05D005629 ORTHO05D008000 1.3e-56 223.4 159 71.7
PGR142G0641 Punica granatum HOM05D005629 ORTHO05D008000 1.3e-56 223.4 159 73.6
Sed0004120 Sechium edule HOM05D005629 ORTHO05D008000 1.3e-56 223.4 159 71.1
CsaV3_3G027030 Cucumis sativus L. HOM05D005629 ORTHO05D008000 1.7e-56 223.0 159 71.7
EL10Ac6g15359 Beta vulgaris HOM05D005629 ORTHO05D008000 2.3e-56 222.6 159 73.0
Ca_26782_v3 Cicer arietinum L. HOM05D005629 ORTHO05D008000 2.3e-56 222.6 142 79.6
DCAR_011309 Daucus carota HOM05D005629 ORTHO05D008000 2.3e-56 222.6 159 73.6
BcaC06g31019 Brassica carinata HOM05D005629 ORTHO05D008000 5.1e-56 221.5 159 71.1
BcaC06g33857 Brassica carinata HOM05D005629 ORTHO05D008000 5.1e-56 221.5 159 71.1
Thhalv10004520m.g Eutrema salsugineum HOM05D005629 ORTHO05D008000 5.1e-56 221.5 159 71.1
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 5.1e-56 221.5 164 72.6
AL5G16240 Arabidopsis lyrata HOM05D005629 ORTHO05D008000 6.6e-56 221.1 159 71.7
BcaC06g33860 Brassica carinata HOM05D005629 ORTHO05D008000 6.6e-56 221.1 159 71.1
Carub.0005s0536 Capsella rubella HOM05D005629 ORTHO05D008000 6.6e-56 221.1 159 71.7
Duzib264G0865 Durio zibethinus HOM05D005629 ORTHO05D008000 6.6e-56 221.1 160 72.5
A06p41480 Brassica napus HOM05D005629 ORTHO05D008000 8.6e-56 220.7 159 71.1
C07p36170 Brassica napus HOM05D005629 ORTHO05D008000 8.6e-56 220.7 159 71.1
BraA06t27073Z Brassica rapa HOM05D005629 ORTHO05D008000 8.6e-56 220.7 159 71.1
Sp2g16240 Schrenkiella parvula HOM05D005629 ORTHO05D008000 8.6e-56 220.7 159 71.1
CARHR148330 Cardamine hirsuta HOM05D005629 ORTHO05D008000 1.5e-55 219.9 159 71.1
Medtr7g033405 Medicago truncatula HOM05D005629 ORTHO05D008000 1.5e-55 219.9 142 78.2
BolC7t44133H Brassica oleracea HOM05D005629 ORTHO05D008000 1.9e-55 219.5 159 70.4
THA.LOC104825621 Tarenaya hassleriana HOM05D005629 ORTHO05D008000 2.5e-55 219.2 159 70.4
AT3G27110 Arabidopsis thaliana HOM05D005629 ORTHO05D008000 3.3e-55 218.8 159 71.1
Lju41A52T99 Lonicera japonica HOM05D005629 ORTHO05D008000 5.6e-55 218.0 173 69.4
Psat3g164800 Pisum sativum HOM05D005629 ORTHO05D008000 5.6e-55 218.0 142 78.2
TPR.G38340 Trifolium pratense HOM05D005629 ORTHO05D008000 5.6e-55 218.0 142 78.9
Zm00001eb127160 Zea mays HOM05D005629 ORTHO05D008000 7.3e-55 217.6 159 69.8
Aa31LG2G5490 Aethionema arabicum HOM05D005629 ORTHO05D008000 9.5e-55 217.2 159 69.2
ATR0561G239 Amborella trichopoda HOM05D005629 ORTHO05D008000 9.5e-55 217.2 159 68.6
HanXRQChr17g0550111 Helianthus annuus HOM05D005629 ORTHO05D008000 9.5e-55 217.2 159 71.1
Os01g0970700 Oryza sativa ssp. japonica HOM05D005629 ORTHO05D008000 9.5e-55 217.2 159 69.8
FAN14G4117 Fragaria x ananassa HOM05D005629 ORTHO05D008000 3.6e-54 215.3 167 70.1
Migut.K01513 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.1e-53 213.8 164 75.0
Rhsim10G0006600 Rhododendron simsii HOM05D005629 ORTHO05D008000 1.1e-53 213.8 159 71.7
Mapoly0033s0112 Marchantia polymorpha HOM05D005629 ORTHO05D008000 3.1e-53 212.2 159 67.3
vmacro05954 Vaccinium macrocarpon HOM05D005629 ORTHO05D008000 4.0e-53 211.8 159 69.8
HPP92_024304 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.2e-52 210.3 159 68.6
SEGI_10761 Sequoiadendron giganteum HOM05D005629 ORTHO05D008000 3.4e-52 208.8 142 72.5
HPP92_024293 Vanilla planifolia HOM05D005629 ORTHO05D008000 4.9e-51 204.9 159 66.7
Hund04337 Selenicereus undatus HOM05D005629 ORTHO05D008000 1.2e-49 200.3 162 66.7
AUR62003511 Chenopodium quinoa HOM05D005629 ORTHO05D008000 2.1e-49 199.5 140 72.9
Dinv25662 Davidia involucrata HOM05D005629 ORTHO05D000552 1.2e-46 190.3 132 76.5
AUR62017822 Chenopodium quinoa HOM05D005629 ORTHO05D008000 6.2e-46 188.0 132 73.5
Gorai.004G126700 Gossypium raimondii HOM05D005629 ORTHO05D008000 4.4e-44 181.8 120 74.2
Gohir.D08G117950 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.8e-43 178.7 118 74.6
Cre14.g620150 Chlamydomonas reinhardtii HOM05D005629 ORTHO05D008000 1.6e-41 173.3 159 56.0
MCO03G471 Micromonas commoda HOM05D005629 ORTHO05D008000 3.0e-40 169.1 159 54.1
Nn4g22342 Nelumbo nucifera HOM05D005629 ORTHO05D008000 1.3e-38 163.7 105 81.0
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis HOM05D005629 ORTHO05D008000 3.3e-31 139.0 109 63.3
Zm00001eb427710 Zea mays HOM05D005629 ORTHO05D003422 1.6e-30 136.7 107 63.6
Zm00001eb146790 Zea mays HOM05D005629 ORTHO05D003607 2.8e-30 136.0 103 66.0
Zm00001eb174780 Zea mays HOM05D005629 ORTHO05D008000 4.8e-30 135.2 112 63.4
PRCOL_00001739 Prasinoderma coloniale HOM05D005629 ORTHO05D008000 8.1e-30 134.4 160 44.4
Zm00001eb332250 Zea mays HOM05D002343 ORTHO05D002443 9.0e-29 131.0 108 61.1
arahy.Tifrunner.gnm1.ann1.0H9GWB Arachis hypogaea HOM05D005629 ORTHO05D008000 1.5e-28 130.2 93 72.0
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 1.7e-27 126.7 94 62.8
FvH4_6g53350 Fragaria vesca HOM05D005629 ORTHO05D022663 7.4e-15 84.7 116 44.8
FvH4_6g53420 Fragaria vesca HOM05D005629 ORTHO05D022663 2.0e-12 76.6 115 41.7
FvH4_6g53390 Fragaria vesca HOM05D005629 ORTHO05D022663 5.8e-12 75.1 112 42.9
Lsat_1_v5_gn_0_46360 Lactuca sativa HOM05D005629 ORTHO05D008000 2.9e-11 72.8 44 84.1
Lsat_1_v5_gn_9_1240 Lactuca sativa HOM05D005629 ORTHO05D008000 3.8e-11 72.4 50 70.0
AagrBONN_evm.TU.Sc2ySwM_228.873 Anthoceros agrestis HOM05D005629 ORTHO05D008000 4.3e-07 58.9 108 25.9
PRCOL_00005410 Prasinoderma coloniale HOM05D005629 ORTHO05D333266 8.2e-06 54.7 79 35.4


User provided reference genes

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