Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 7.7e-230 800.0 385 100.0
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.7e-144 516.5 401 65.8
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 2.7e-142 509.2 336 70.5
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 1.7e-139 500.0 336 69.6
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.2e-137 493.8 337 69.4
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 1.3e-136 490.3 367 65.1
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 1.9e-135 486.5 336 68.5
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.2e-134 483.8 384 63.0
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 1.0e-133 480.7 388 61.6
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 1.8e-133 479.9 376 62.2
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 6.7e-133 478.0 388 61.3
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 6.7e-133 478.0 373 63.0
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.2e-132 477.2 358 64.2
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.3e-132 475.7 338 66.9
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 1.3e-131 473.8 368 63.3
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 1.3e-131 473.8 381 61.7
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 4.8e-131 471.9 336 67.6
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 5.3e-130 468.4 377 62.1
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 7.0e-130 468.0 338 67.2
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.6e-129 466.8 362 63.3
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 3.5e-129 465.7 378 59.5
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 3.5e-129 465.7 403 58.6
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 1.0e-128 464.2 359 64.6
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.7e-128 463.4 397 59.7
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.7e-128 463.4 381 60.6
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 2.2e-128 463.0 380 60.8
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 2.2e-128 463.0 375 62.1
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.9e-128 462.6 338 66.0
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 6.5e-128 461.5 383 58.7
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 2.5e-127 459.5 383 60.8
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 3.2e-127 459.1 341 66.9
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 5.5e-127 458.4 374 60.4
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 7.2e-127 458.0 342 65.5
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 9.4e-127 457.6 378 60.8
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 2.7e-126 456.1 336 65.5
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 2.7e-126 456.1 360 63.1
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 4.7e-126 455.3 338 65.4
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 8.0e-126 454.5 336 65.8
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 8.0e-126 454.5 389 57.6
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 8.0e-126 454.5 378 60.8
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 1.4e-125 453.8 378 60.1
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 2.3e-125 453.0 351 62.7
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 3.0e-125 452.6 393 58.8
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 3.0e-125 452.6 338 63.6
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 4.0e-125 452.2 337 65.6
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 5.2e-125 451.8 341 65.4
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 6.8e-125 451.4 393 58.5
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 1.5e-124 450.3 355 62.3
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 3.4e-124 449.1 361 63.2
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.7e-124 448.4 335 65.4
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.7e-124 448.4 335 65.4
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 5.7e-124 448.4 380 60.0
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 7.5e-124 448.0 358 61.7
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 9.8e-124 447.6 359 63.0
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 9.8e-124 447.6 337 63.8
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 1.7e-123 446.8 378 59.0
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.8e-123 446.0 371 60.4
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 3.7e-123 445.7 330 64.5
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 3.7e-123 445.7 373 60.3
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 4.8e-123 445.3 341 62.2
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 1.4e-122 443.7 343 62.7
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.8e-122 443.4 376 60.1
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.4e-122 443.0 385 58.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 2.4e-122 443.0 338 64.8
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 3.1e-122 442.6 378 57.9
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 4.1e-122 442.2 371 60.1
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.0e-122 441.4 354 61.6
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 9.1e-122 441.0 389 57.6
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 9.1e-122 441.0 336 64.0
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 1.6e-121 440.3 358 59.5
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 7.7e-121 438.0 379 59.6
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 2.3e-120 436.4 335 61.8
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 8.6e-120 434.5 402 57.7
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.5e-119 433.0 379 59.4
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 7.2e-119 431.4 338 62.7
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 1.6e-118 430.3 340 60.0
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 4.7e-118 428.7 386 57.0
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 4.7e-118 428.7 320 65.3
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 6.1e-118 428.3 372 56.7
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.4e-117 427.2 375 59.2
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.4e-117 427.2 385 57.4
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 6.8e-117 424.9 365 59.7
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 6.8e-117 424.9 351 59.5
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 1.2e-116 424.1 363 58.7
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 2.0e-116 423.3 387 58.7
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.4e-116 422.5 340 59.1
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 1.8e-114 416.8 297 67.3
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 4.1e-114 415.6 340 59.7
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.6e-113 413.7 349 59.6
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 2.7e-113 412.9 338 60.4
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.5e-113 412.5 347 60.5
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 4.5e-113 412.1 291 67.0
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 5.9e-113 411.8 313 65.2
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 5.9e-113 411.8 302 65.6
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.9e-112 409.5 338 60.4
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 2.2e-107 393.3 366 56.8
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 2.9e-107 392.9 352 58.5
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.8e-106 390.2 333 55.9
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 4.6e-105 385.6 337 57.3
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 6.6e-104 381.7 386 53.9
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 6.6e-104 381.7 339 56.6
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 2.0e-100 370.2 362 53.6
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 5.8e-100 368.6 332 56.6
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 2.8e-94 349.7 340 54.7
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.8e-94 349.7 317 55.2
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 6.8e-93 345.1 324 52.8
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.9e-90 337.0 343 52.8
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 7.8e-89 331.6 362 48.3
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 5.8e-84 315.5 360 48.6
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 7.1e-82 308.5 313 50.2
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 2.7e-81 306.6 260 61.2
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 2.9e-75 286.6 274 55.1
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 3.5e-73 279.6 320 46.9
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.1e-69 268.1 290 48.6
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 2.1e-65 253.8 232 56.0
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.1e-61 240.0 346 38.7
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.2e-60 238.0 312 43.6
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.4e-60 236.5 308 38.6
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 1.2e-52 211.5 316 41.5
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 3.4e-52 209.9 129 75.2
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 9.7e-39 165.2 145 51.7
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 1.1e-34 151.8 90 77.8
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 1.4e-34 151.4 86 80.2
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 7.2e-26 122.5 218 37.2
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 2.0e-23 114.4 104 59.6
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.6e-17 94.7 92 50.0
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 1.2e-09 68.6 42 69.0
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.4e-08 65.1 69 49.3
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.6e-07 60.8 62 45.2


User provided reference genes

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