Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00444 Erythranthe guttata HOM05D006756 ORTHO05D001869 0.0e+00 1156.0 601 100.0
SalBow1G7291 Salvia bowleyana HOM05D006756 ORTHO05D001869 4.9e-138 495.7 645 51.2
SGA_v2.0_scaffold464G52008 Striga asiatica HOM05D006756 ORTHO05D001869 1.6e-128 464.2 612 49.8
Oeu058044.1 Olea europaea HOM05D006756 ORTHO05D001869 2.0e-107 394.0 635 45.2
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 3.7e-93 346.7 633 42.2
unitig_748.g7157 Utricularia gibba HOM05D006756 ORTHO05D001869 1.9e-89 334.3 605 42.0
Cc06_g08320 Coffea canephora HOM05D006756 ORTHO05D001869 1.1e-86 325.1 626 41.1
CSS0003155 Camellia sinensis var. sinensis HOM05D006756 ORTHO05D001869 3.8e-82 310.1 622 40.2
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 6.5e-82 309.3 615 40.3
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 2.5e-81 307.4 609 40.4
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 1.0e-79 302.0 590 37.5
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 4.3e-78 296.6 645 38.6
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 7.4e-78 295.8 641 39.3
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 3.1e-76 290.4 642 38.0
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 1.5e-75 288.1 624 39.1
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 1.3e-74 285.0 611 37.3
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 1.3e-74 285.0 647 36.6
CAN.G573.9 Capsicum annuum HOM05D006756 ORTHO05D001869 5.0e-74 283.1 627 38.6
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 9.4e-73 278.9 621 37.8
Cfa003391 Carpinus fangiana HOM05D006756 ORTHO05D001869 7.9e-72 275.8 599 36.9
Solyc07g008190.4 Solanum lycopersicum HOM05D006756 ORTHO05D001869 1.4e-71 275.0 627 38.0
Sopen07g004070 Solanum pennellii HOM05D006756 ORTHO05D001869 1.4e-71 275.0 631 38.0
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 2.3e-71 274.2 648 35.6
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 8.8e-71 272.3 608 37.5
Duzib168G2156 Durio zibethinus HOM05D006756 ORTHO05D001869 1.1e-70 271.9 620 37.4
Sabra18G0110400 Salix brachista HOM05D006756 ORTHO05D001869 2.2e-69 267.7 665 35.3
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 2.8e-69 267.3 636 35.1
Prupe.7G245100 Prunus persica HOM05D006756 ORTHO05D001869 2.8e-69 267.3 613 37.0
Thecc.09G128500 Theobroma cacao HOM05D006756 ORTHO05D001869 8.2e-69 265.8 598 38.5
Manes.14G133500 Manihot esculenta HOM05D006756 ORTHO05D001869 1.8e-68 264.6 639 35.4
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 4.1e-68 263.5 574 36.8
CsaV3_1G030330 Cucumis sativus L. HOM05D006756 ORTHO05D001869 7.0e-68 262.7 626 35.1
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 7.7e-67 259.2 649 34.8
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 7.7e-67 259.2 643 36.7
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 3.8e-66 256.9 625 37.3
Nitab4.5_0006268g0010 Nicotiana tabacum HOM05D006756 ORTHO05D001869 5.0e-66 256.5 678 35.0
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 6.5e-66 256.1 610 36.9
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 4.2e-65 253.4 645 34.7
Sed0004031 Sechium edule HOM05D006756 ORTHO05D001869 2.1e-64 251.1 590 35.4
Lsat_1_v5_gn_8_58441 Lactuca sativa HOM05D006756 ORTHO05D001869 2.0e-62 244.6 611 37.0
Haze_25558 Corylus avellana HOM05D006756 ORTHO05D001869 5.7e-62 243.0 700 32.4
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 7.4e-62 242.7 611 35.4
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 1.3e-61 241.9 714 34.9
FvH4_1g03050 Fragaria vesca HOM05D006756 ORTHO05D001869 1.7e-61 241.5 627 35.4
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 1.4e-60 238.4 603 34.3
TWI34G1307 Tripterygium wilfordii HOM05D006756 ORTHO05D001869 1.2e-59 235.3 615 33.8
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 4.5e-59 233.4 590 36.8
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 2.9e-58 230.7 603 35.3
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 5.0e-58 229.9 637 34.7
DCAR_017806 Daucus carota HOM05D006756 ORTHO05D001869 4.2e-57 226.9 628 35.7
Nitab4.5_0000028g0240 Nicotiana tabacum HOM05D006756 ORTHO05D001869 4.2e-57 226.9 741 31.0
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 7.2e-57 226.1 644 34.2
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 8.0e-56 222.6 613 32.1
ECA236G0350 Erigeron canadensis HOM05D006756 ORTHO05D001869 4.4e-54 216.9 609 34.3
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 4.4e-54 216.9 625 33.4
Eucgr.C01517 Eucalyptus grandis HOM05D006756 ORTHO05D001869 9.7e-54 215.7 607 33.6
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 1.3e-53 215.3 613 32.5
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 1.1e-52 212.2 646 32.8
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 1.8e-52 211.5 606 34.5
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 9.1e-52 209.1 638 33.2
Lj1g0024911 Lotus japonicus HOM05D006756 ORTHO05D001869 2.9e-50 204.1 649 31.7
Psat1g024440 Pisum sativum HOM05D006756 ORTHO05D001869 5.5e-49 199.9 617 33.1
PSO170G5619 Papaver somniferum HOM05D006756 ORTHO05D001869 1.2e-48 198.7 546 33.3
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 1.2e-48 198.7 612 30.7
EL10Ac8g18682 Beta vulgaris HOM05D006756 ORTHO05D001869 8.0e-48 196.1 608 33.7
Medtr7g033910 Medicago truncatula HOM05D006756 ORTHO05D001869 1.8e-47 194.9 617 32.7
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 4.0e-47 193.7 594 32.2
PGR142G2180 Punica granatum HOM05D006756 ORTHO05D001869 8.8e-47 192.6 604 33.3
TPR.G9536 Trifolium pratense HOM05D006756 ORTHO05D001869 4.4e-46 190.3 617 33.4
AUR62011148 Chenopodium quinoa HOM05D006756 ORTHO05D001869 3.7e-45 187.2 597 32.0
Ah.09g225260 Amaranthus hybridus HOM05D006756 ORTHO05D001869 8.3e-45 186.0 592 32.6
Sed0021917 Sechium edule HOM05D006756 ORTHO05D001869 1.4e-44 185.3 555 31.0
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 1.8e-44 184.9 609 32.0
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 7.0e-44 183.0 645 31.6
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 7.0e-44 183.0 422 36.7
CARHR192620 Cardamine hirsuta HOM05D006756 ORTHO05D001869 1.2e-43 182.2 616 29.9
AUR62013339 Chenopodium quinoa HOM05D006756 ORTHO05D001869 1.2e-43 182.2 605 32.2
Phvul.009G207200 Phaseolus vulgaris HOM05D006756 ORTHO05D001869 5.0e-42 176.8 567 32.8
Carub.0006s1860 Capsella rubella HOM05D006756 ORTHO05D001869 8.6e-42 176.0 630 30.6
Duzib150G0144 Durio zibethinus HOM05D006756 ORTHO05D001869 2.8e-40 171.0 380 36.6
FAN26G0517 Fragaria x ananassa HOM05D006756 ORTHO05D001869 4.0e-39 167.2 624 31.6
AL6G31760 Arabidopsis lyrata HOM05D006756 ORTHO05D001869 5.2e-39 166.8 631 29.0
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 8.9e-39 166.0 653 29.4
AT5G20200 Arabidopsis thaliana HOM05D006756 ORTHO05D001869 1.2e-38 165.6 634 29.5
Thhalv10012771m.g Eutrema salsugineum HOM05D006756 ORTHO05D001869 5.7e-38 163.3 622 30.2
FAN23G1563 Fragaria x ananassa HOM05D006756 ORTHO05D001869 5.7e-38 163.3 622 31.4
FAN28G3026 Fragaria x ananassa HOM05D006756 ORTHO05D001869 2.2e-37 161.4 614 30.8
Sp6g24200 Schrenkiella parvula HOM05D006756 ORTHO05D001869 2.2e-37 161.4 630 28.9
BcaC03g13743 Brassica carinata HOM05D006756 ORTHO05D001869 1.8e-36 158.3 623 28.6
BraA10t44048Z Brassica rapa HOM05D006756 ORTHO05D001869 2.0e-35 154.8 636 29.9
Aqoxy7G02256 Aquilegia oxysepala HOM05D006756 ORTHO05D001869 1.3e-34 152.1 439 32.6
BcaB05g22863 Brassica carinata HOM05D006756 ORTHO05D001869 5.0e-34 150.2 628 29.8
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 1.5e-33 148.7 615 29.3
BcaC04g19408 Brassica carinata HOM05D006756 ORTHO05D001869 2.8e-32 144.4 626 28.8
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 7.5e-30 136.3 355 32.1
BcaB08g36540 Brassica carinata HOM05D006756 ORTHO05D001869 6.4e-29 133.3 623 27.9
COL.COLO4_35103 Corchorus olitorius HOM05D006756 ORTHO05D001869 1.9e-28 131.7 285 40.0
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 2.4e-28 131.3 479 31.3
PSO017G1072 Papaver somniferum HOM05D006756 ORTHO05D001869 1.2e-27 129.0 607 28.3
HanXRQChr05g0140241 Helianthus annuus HOM05D006756 ORTHO05D001869 1.6e-27 128.6 279 35.5
Glyma.06G217600 Glycine max HOM05D006756 ORTHO05D001869 1.6e-24 118.6 287 37.3
Dinv41496 Davidia involucrata HOM05D006756 ORTHO05D001869 2.3e-23 114.8 382 31.4
Gohir.D05G016600 Gossypium hirsutum HOM05D006756 ORTHO05D001869 5.8e-22 110.2 477 27.5
Glyma.06G217700 Glycine max HOM05D006756 ORTHO05D001869 9.8e-22 109.4 239 36.8
ATR1120G177 Amborella trichopoda HOM05D006756 ORTHO05D001869 7.0e-20 103.2 639 26.4
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 5.1e-18 97.1 379 32.5
FvH4_7g05480 Fragaria vesca HOM05D003044 ORTHO05D001869 6.6e-18 96.7 350 31.4
Actinidia40482 Actinidia chinensis HOM05D006756 ORTHO05D001869 4.3e-17 94.0 118 51.7
HanXRQChr05g0140231 Helianthus annuus HOM05D006756 ORTHO05D001869 1.4e-15 89.0 183 40.4
PSO384G0573 Papaver somniferum HOM05D003044 ORTHO05D001869 6.8e-15 86.7 359 26.5
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 6.8e-15 86.7 358 30.2
Zm00001eb386510 Zea mays HOM05D006756 ORTHO05D001869 3.4e-14 84.3 577 23.7
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 7.5e-14 83.2 419 25.1
FAN10G1738 Fragaria x ananassa HOM05D003044 ORTHO05D001869 2.9e-13 81.3 373 30.8
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 4.9e-13 80.5 388 30.2
FAN03G0021 Fragaria x ananassa HOM05D003044 ORTHO05D001869 6.4e-13 80.1 331 31.4
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 6.4e-13 80.1 392 29.8
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 1.4e-12 79.0 388 29.4
FAN01G1587 Fragaria x ananassa HOM05D003044 ORTHO05D001869 1.9e-12 78.6 331 31.1
Duzib187G1404 Durio zibethinus HOM05D006756 ORTHO05D001869 2.4e-12 78.2 349 31.5
FAN10G0351 Fragaria x ananassa HOM05D003044 ORTHO05D001869 3.2e-12 77.8 331 31.1
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 1.6e-11 75.5 364 28.0
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 2.7e-11 74.7 363 30.6
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 1.3e-10 72.4 403 26.6
SGA_v2.0_scaffold90G27707 Striga asiatica HOM05D003044 ORTHO05D001869 6.6e-10 70.1 354 29.4
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 8.6e-10 69.7 433 26.1
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 8.6e-10 69.7 357 26.1
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.1e-09 69.3 397 29.5
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 1.5e-09 68.9 388 29.4
Nn2g14384 Nelumbo nucifera HOM05D003044 ORTHO05D001869 1.9e-09 68.6 351 27.9
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 2.5e-09 68.2 433 28.2
CSS0029861 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 3.3e-09 67.8 419 27.4
FvH4_7g05440 Fragaria vesca HOM05D003044 ORTHO05D001869 3.3e-09 67.8 182 30.8
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 3.3e-09 67.8 450 26.4
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 4.3e-09 67.4 473 25.2
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.3e-09 67.4 382 28.8
CSS0031943 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 5.6e-09 67.0 411 27.5
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 7.3e-09 66.6 607 24.1
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 1.2e-08 65.9 421 25.4
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 1.2e-08 65.9 461 26.9
CDE04G3330 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 2.8e-08 64.7 363 25.3
ECA238G0186 Erigeron canadensis HOM05D003044 ORTHO05D001869 3.6e-08 64.3 367 27.5
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 3.6e-08 64.3 398 26.9
SGA_v2.0_scaffold13G06427 Striga asiatica HOM05D003044 ORTHO05D001869 3.6e-08 64.3 398 27.6
Duzib114G0797 Durio zibethinus HOM05D003044 ORTHO05D001869 4.7e-08 63.9 401 26.9
Peaxi162Scf00120g00721 Petunia axillaris HOM05D003044 ORTHO05D001869 4.7e-08 63.9 370 27.3
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 6.2e-08 63.5 400 25.2
Gohir.A05G396100 Gossypium hirsutum HOM05D003044 ORTHO05D001869 8.1e-08 63.2 447 26.0
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 8.1e-08 63.2 389 27.2
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 8.1e-08 63.2 452 25.9
DCAR_018987 Daucus carota HOM05D003044 ORTHO05D001869 1.1e-07 62.8 360 27.8
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 1.1e-07 62.8 373 27.3
TWI63G0823 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 1.1e-07 62.8 495 27.9
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 2.4e-07 61.6 401 26.7
CiPaw.13G045500 Carya illinoinensis HOM05D003044 ORTHO05D001869 3.1e-07 61.2 430 24.4
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 5.2e-07 60.5 562 25.1
Ciclev10014057m.g Citrus clementina HOM05D003044 ORTHO05D001869 5.2e-07 60.5 615 26.5
Eucgr.J00304 Eucalyptus grandis HOM05D003044 ORTHO05D001869 5.2e-07 60.5 387 24.5
Lsat_1_v5_gn_2_106321 Lactuca sativa HOM05D003044 ORTHO05D001869 6.8e-07 60.1 357 24.9
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 6.8e-07 60.1 569 25.7
Os06g0606900 Oryza sativa ssp. japonica HOM05D006756 ORTHO05D001869 8.9e-07 59.7 211 28.0
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 1.2e-06 59.3 399 25.3
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 1.2e-06 59.3 393 28.2
Cc02_g09260 Coffea canephora HOM05D003044 ORTHO05D001869 1.5e-06 58.9 377 27.3
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 1.5e-06 58.9 471 25.1
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 1.5e-06 58.9 361 27.4
THA.LOC104816476 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 2.6e-06 58.2 391 25.1
Aqoxy1G00609 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 3.4e-06 57.8 361 25.2
THA.LOC104823155 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 3.4e-06 57.8 402 26.1
SalBow6G6809 Salvia bowleyana HOM05D003044 ORTHO05D001869 7.6e-06 56.6 250 28.0
Solyc11g006390.2 Solanum lycopersicum HOM05D003044 ORTHO05D001869 7.6e-06 56.6 370 27.3


User provided reference genes

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