Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 1.8e-176 622.5 319 100.0
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 1.5e-170 602.8 321 97.8
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 5.8e-146 521.2 313 82.4
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 9.8e-146 520.4 312 83.7
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 3.7e-145 518.5 313 82.7
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 4.3e-141 505.0 311 79.4
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 2.0e-138 496.1 312 78.2
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 1.7e-137 493.0 313 77.3
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 7.1e-136 487.6 313 75.1
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 9.2e-136 487.3 317 75.1
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 1.6e-135 486.5 317 75.1
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 2.7e-135 485.7 313 76.4
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 3.5e-135 485.3 317 75.1
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 4.6e-135 485.0 318 75.2
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 1.0e-134 483.8 311 74.3
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 2.3e-134 482.6 311 76.8
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 3.0e-134 482.3 311 74.3
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 2.5e-133 479.2 313 74.4
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 2.5e-133 479.2 313 74.4
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 3.6e-132 475.3 313 74.8
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 8.1e-132 474.2 340 71.5
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 1.4e-131 473.4 313 75.4
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 3.1e-131 472.2 313 73.8
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 4.0e-131 471.9 315 73.0
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 6.8e-131 471.1 313 73.2
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 5.8e-130 468.0 315 71.7
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 7.6e-130 467.6 318 72.0
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 9.9e-130 467.2 315 72.1
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 9.9e-130 467.2 293 78.2
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 1.7e-129 466.5 311 74.6
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 4.9e-129 464.9 313 72.5
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 6.4e-129 464.5 313 72.2
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 8.3e-129 464.2 299 74.2
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 8.3e-129 464.2 311 72.0
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 2.4e-128 462.6 313 74.1
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 1.2e-127 460.3 313 72.8
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 2.1e-127 459.5 313 72.8
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 2.7e-127 459.1 291 77.3
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.7e-127 459.1 311 71.7
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 6.0e-127 458.0 313 70.9
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.0e-126 457.2 313 72.2
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 1.3e-126 456.8 313 70.3
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 2.3e-126 456.1 313 71.2
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 2.3e-126 456.1 313 71.2
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 3.9e-126 455.3 313 71.9
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 3.9e-126 455.3 306 74.2
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 5.1e-126 454.9 298 74.8
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 6.6e-126 454.5 313 70.9
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 1.1e-125 453.8 313 71.9
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 1.1e-125 453.8 312 71.8
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 2.5e-125 452.6 311 73.0
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 2.5e-125 452.6 313 71.2
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 5.6e-125 451.4 313 71.2
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 5.6e-125 451.4 313 69.6
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 9.6e-125 450.7 313 70.3
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 9.6e-125 450.7 313 70.6
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 2.1e-124 449.5 313 71.2
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 2.8e-124 449.1 313 71.2
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 2.8e-124 449.1 313 68.7
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 2.8e-124 449.1 314 71.3
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 4.7e-124 448.4 313 70.0
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 2.4e-123 446.0 311 70.4
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 2.4e-123 446.0 313 70.9
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 4.0e-123 445.3 286 76.6
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 2.6e-122 442.6 301 72.1
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 9.9e-122 440.7 312 70.2
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 1.7e-121 439.9 301 71.8
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.9e-121 439.1 311 71.1
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 3.8e-121 438.7 311 70.7
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 6.4e-121 438.0 313 71.9
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.1e-120 437.2 312 69.9
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 1.1e-120 437.2 308 70.8
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.4e-120 436.8 312 69.6
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 2.7e-119 432.6 309 68.3
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 7.8e-119 431.0 313 68.7
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 1.0e-118 430.6 313 67.4
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 1.3e-118 430.3 340 64.4
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 3.0e-118 429.1 313 69.0
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 3.0e-118 429.1 313 66.8
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 3.3e-117 425.6 290 70.3
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 5.6e-117 424.9 293 67.6
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 7.3e-117 424.5 311 67.2
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 9.6e-117 424.1 313 65.8
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 1.3e-116 423.7 326 66.0
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.3e-116 423.7 326 66.0
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.3e-116 423.7 326 66.0
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 3.6e-116 422.2 313 65.8
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 4.8e-116 421.8 311 66.6
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 1.1e-115 420.6 299 67.9
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.2e-114 417.2 326 64.7
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 2.6e-114 416.0 310 65.2
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 2.6e-114 416.0 310 65.8
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 2.6e-114 416.0 310 65.8
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 2.6e-114 416.0 310 65.8
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 3.4e-114 415.6 317 64.4
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 4.4e-114 415.2 310 65.5
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 4.4e-114 415.2 336 64.0
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 9.9e-114 414.1 310 65.2
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 1.7e-113 413.3 313 65.8
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 2.9e-113 412.5 320 63.4
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 8.4e-113 411.0 311 65.0
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 1.1e-112 410.6 326 63.8
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.4e-112 410.2 313 66.1
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 2.4e-112 409.5 312 65.1
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 4.2e-112 408.7 312 65.4
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 9.3e-112 407.5 299 66.2
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 9.3e-112 407.5 317 62.1
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 1.6e-111 406.8 299 65.9
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 1.6e-111 406.8 299 65.9
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 2.1e-111 406.4 299 65.9
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 5.6e-109 398.3 292 66.8
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 3.1e-107 392.5 300 64.0
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 6.9e-107 391.3 315 63.8
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 9.0e-107 391.0 317 63.1
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 1.3e-105 387.1 268 67.5
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 3.8e-105 385.6 257 71.6
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 4.2e-104 382.1 253 72.3
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 8.7e-102 374.4 326 61.7
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 4.3e-101 372.1 313 63.3
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.2e-98 364.0 313 62.6
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 4.8e-92 342.0 222 75.2
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 3.1e-91 339.3 321 53.6
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 1.2e-90 337.4 298 55.7
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 1.4e-88 330.5 299 55.9
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.8e-86 323.6 233 67.4
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 9.7e-85 317.8 222 68.9
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 5.5e-80 302.0 307 51.5
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 4.6e-79 298.9 313 49.8
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 5.7e-77 292.0 276 55.4
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 2.6e-74 283.1 294 51.7
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 3.9e-70 269.2 306 46.7
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 1.1e-69 267.7 230 63.9
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 2.9e-65 253.1 297 48.5
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 1.6e-50 204.1 175 62.9
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 8.8e-46 188.3 293 37.2
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 4.1e-35 152.9 106 67.0
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 4.4e-29 132.9 90 75.6
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 7.5e-29 132.1 93 69.9
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 9.8e-29 131.7 94 68.1
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 1.5e-24 117.9 79 73.4
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 4.6e-18 96.3 114 50.0
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 3.6e-15 86.7 90 52.2
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 3.6e-15 86.7 90 52.2
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 3.7e-12 76.6 98 50.0
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 3.2e-11 73.6 90 45.6


User provided reference genes

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