Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00832 Erythranthe guttata HOM05D001776 ORTHO05D001771 2.1e-61 238.8 116 100.0
SGA_v2.0_scaffold21G09625 Striga asiatica HOM05D001776 ORTHO05D001771 6.5e-15 84.3 93 52.7
Hma1.2p1_0314F.1_g121970 Hydrangea macrophylla HOM05D001776 ORTHO05D001771 1.8e-12 76.3 107 45.8
MSTRG.10463 Avicennia marina HOM05D001776 ORTHO05D001771 2.6e-11 72.4 97 47.4
Peaxi162Scf00954g00319 Petunia axillaris HOM05D001776 ORTHO05D001771 2.6e-11 72.4 84 47.6
RcHm_v2.0_Chr4g0397961 Rosa chinensis HOM05D001776 ORTHO05D001771 3.4e-11 72.0 94 46.8
FvH4_4g06240 Fragaria vesca HOM05D001776 ORTHO05D001771 7.5e-11 70.9 94 46.8
FAN07G0851 Fragaria x ananassa HOM05D001776 ORTHO05D001771 7.5e-11 70.9 94 46.8
FAN12G2880 Fragaria x ananassa HOM05D001776 ORTHO05D001771 7.5e-11 70.9 94 46.8
FAN17G1350 Fragaria x ananassa HOM05D001776 ORTHO05D001771 7.5e-11 70.9 94 46.8
FAN22G1406 Fragaria x ananassa HOM05D001776 ORTHO05D001771 7.5e-11 70.9 94 46.8
MSTRG.26521 Avicennia marina HOM05D001776 ORTHO05D001771 1.3e-10 70.1 94 47.9
Eucgr.C00067 Eucalyptus grandis HOM05D001776 ORTHO05D001771 1.3e-10 70.1 88 45.5
Dinv26467 Davidia involucrata HOM05D001776 ORTHO05D001771 1.7e-10 69.7 97 47.4
SalBow6G0354 Salvia bowleyana HOM05D001776 ORTHO05D001771 2.2e-10 69.3 120 40.0
Cc00_g00460 Coffea canephora HOM05D001776 ORTHO05D001771 2.8e-10 68.9 85 49.4
Hma1.2p1_0284F.1_g113830 Hydrangea macrophylla HOM05D001776 ORTHO05D001771 3.7e-10 68.6 88 45.5
CARHR217370 Cardamine hirsuta HOM05D001776 ORTHO05D001771 8.3e-10 67.4 92 44.6
Oeu021032.1 Olea europaea HOM05D001776 ORTHO05D001771 8.3e-10 67.4 88 46.6
SGA_v2.0_scaffold693G53460 Striga asiatica HOM05D001776 ORTHO05D001771 8.3e-10 67.4 89 43.8
Actinidia13370 Actinidia chinensis HOM05D001776 ORTHO05D001771 1.1e-09 67.0 101 40.6
Nn8g41094 Nelumbo nucifera HOM05D001776 ORTHO05D001771 1.1e-09 67.0 96 42.7
Oeu036947.1 Olea europaea HOM05D001776 ORTHO05D001771 1.8e-09 66.2 90 46.7
CAN.G106.15 Capsicum annuum HOM05D001776 ORTHO05D001771 2.4e-09 65.9 98 44.9
Nitab4.5_0004188g0070 Nicotiana tabacum HOM05D001776 ORTHO05D001771 2.4e-09 65.9 102 44.1
Dinv12597 Davidia involucrata HOM05D001776 ORTHO05D001771 4.1e-09 65.1 97 44.3
Oeu057461.1 Olea europaea HOM05D001776 ORTHO05D001771 4.1e-09 65.1 89 50.6
Aa31LG9G5220 Aethionema arabicum HOM05D001776 ORTHO05D001771 5.4e-09 64.7 93 41.9
Sopen05g027760 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-09 64.7 97 42.3
PGSC0003DMG400013699 Solanum tuberosum HOM05D001776 ORTHO05D001771 9.1e-09 63.9 97 42.3
Thecc.09G194000 Theobroma cacao HOM05D001776 ORTHO05D001771 9.1e-09 63.9 101 45.5
Atru.chr7.974 Acer truncatum HOM05D001776 ORTHO05D001771 1.2e-08 63.5 99 44.4
TAR626G1512 Trochodendron aralioides HOM05D001776 ORTHO05D001771 1.2e-08 63.5 78 47.4
Actinidia02483 Actinidia chinensis HOM05D001776 ORTHO05D001771 1.6e-08 63.2 101 37.6
SGA_v2.0_scaffold31G12721 Striga asiatica HOM05D001776 ORTHO05D001771 1.6e-08 63.2 92 44.6
Ciclev10008843m.g Citrus clementina HOM05D001776 ORTHO05D001771 2.0e-08 62.8 104 43.3
QL11p009249 Quercus lobata HOM05D001776 ORTHO05D001771 2.0e-08 62.8 95 41.1
GSVIVG01032322001 Vitis vinifera HOM05D001776 ORTHO05D001771 2.0e-08 62.8 97 42.3
Actinidia38521 Actinidia chinensis HOM05D001776 ORTHO05D001771 3.5e-08 62.0 99 40.4
Gohir.D05G001600 Gossypium hirsutum HOM05D001776 ORTHO05D001771 3.5e-08 62.0 92 43.5
Gorai.009G001500 Gossypium raimondii HOM05D001776 ORTHO05D001771 3.5e-08 62.0 92 43.5
AL7G44140 Arabidopsis lyrata HOM05D001776 ORTHO05D001771 5.9e-08 61.2 93 45.2
CSS0006410 Camellia sinensis var. sinensis HOM05D001776 ORTHO05D001771 5.9e-08 61.2 94 42.6
MELO3C003942.2 Cucumis melo HOM05D001776 ORTHO05D001771 1.3e-07 60.1 85 47.1
CANSAT80G0007 Cannabis sativa HOM05D001776 ORTHO05D001771 1.7e-07 59.7 94 43.6
Aqoxy7G02693 Aquilegia oxysepala HOM05D001776 ORTHO05D001771 2.3e-07 59.3 94 41.5
Actinidia31883 Actinidia chinensis HOM05D001776 ORTHO05D001771 2.9e-07 58.9 100 39.0
PSO063G5421 Papaver somniferum HOM05D001776 ORTHO05D001771 2.9e-07 58.9 91 44.0
TPR.G21354 Trifolium pratense HOM05D001776 ORTHO05D001771 2.9e-07 58.9 89 39.3
Gohir.A05G001300 Gossypium hirsutum HOM05D001776 ORTHO05D001771 3.8e-07 58.5 92 42.4
BcaC07g37670 Brassica carinata HOM05D001776 ORTHO05D001771 5.0e-07 58.2 64 50.0
A08p09650 Brassica napus HOM05D001776 ORTHO05D001771 5.0e-07 58.2 64 50.0
BolC8t48040H Brassica oleracea HOM05D001776 ORTHO05D001771 5.0e-07 58.2 64 50.0
BraA08t32962Z Brassica rapa HOM05D001776 ORTHO05D001771 5.0e-07 58.2 64 50.0
Hund19364 Selenicereus undatus HOM05D001776 ORTHO05D001771 5.0e-07 58.2 107 38.3
Nitab4.5_0000413g0060 Nicotiana tabacum HOM05D001776 ORTHO05D001771 6.6e-07 57.8 88 42.0
QL11p011525 Quercus lobata HOM05D001776 ORTHO05D001771 6.6e-07 57.8 75 45.3
AT5G35330 Arabidopsis thaliana HOM05D001776 ORTHO05D001771 8.6e-07 57.4 91 45.1
Haze_19051 Corylus avellana HOM05D001776 ORTHO05D001771 1.1e-06 57.0 95 37.9
Nitab4.5_0001205g0020 Nicotiana tabacum HOM05D001776 ORTHO05D001771 1.1e-06 57.0 88 40.9
EL10Ac2g03640 Beta vulgaris HOM05D001776 ORTHO05D001771 1.5e-06 56.6 96 39.6
CSS0027028 Camellia sinensis var. sinensis HOM05D001776 ORTHO05D001771 1.5e-06 56.6 100 41.0
unitig_899.g15185 Utricularia gibba HOM05D005244 ORTHO05D006539 1.5e-06 56.6 102 38.2
CsaV3_2G009010 Cucumis sativus L. HOM05D001776 ORTHO05D001771 1.9e-06 56.2 85 45.9
Migut.B00848 Erythranthe guttata HOM05D001776 ORTHO05D001771 1.9e-06 56.2 80 42.5
BcaB04g18054 Brassica carinata HOM05D001776 ORTHO05D001771 2.5e-06 55.8 66 48.5
Glyma.07G130300 Glycine max HOM05D001776 ORTHO05D001771 2.5e-06 55.8 83 36.1
Medtr6g093020 Medicago truncatula HOM05D001776 ORTHO05D001771 2.5e-06 55.8 88 38.6
Peaxi162Scf00320g00413 Petunia axillaris HOM05D001776 ORTHO05D001771 2.5e-06 55.8 85 40.0
Phvul.004G177500 Phaseolus vulgaris HOM05D001776 ORTHO05D001771 2.5e-06 55.8 92 40.2
PGR142G2549 Punica granatum HOM05D001776 ORTHO05D001771 2.5e-06 55.8 76 43.4
Cfa020736 Carpinus fangiana HOM05D001776 ORTHO05D001771 3.3e-06 55.5 95 36.8
CiPaw.16G103200 Carya illinoinensis HOM05D001776 ORTHO05D001771 3.3e-06 55.5 96 39.6
THA.LOC104808910 Tarenaya hassleriana HOM05D001776 ORTHO05D001771 3.3e-06 55.5 73 46.6
TWI32G0050 Tripterygium wilfordii HOM05D001776 ORTHO05D001771 3.3e-06 55.5 94 42.6
vmacro20780 Vaccinium macrocarpon HOM05D001776 ORTHO05D001771 3.3e-06 55.5 86 41.9
Cpa.g.sc115.32 Carica papaya HOM05D001776 ORTHO05D001771 4.2e-06 55.1 96 41.7
Manes.15G099400 Manihot esculenta HOM05D001776 ORTHO05D001771 4.2e-06 55.1 76 50.0
Potri.018G145500 Populus trichocarpa HOM05D001776 ORTHO05D001771 4.2e-06 55.1 89 41.6
Prupe.1G065600 Prunus persica HOM05D001776 ORTHO05D001771 4.2e-06 55.1 101 40.6
Thhalv10003457m.g Eutrema salsugineum HOM05D001776 ORTHO05D001771 5.5e-06 54.7 81 46.9
Potri.018G146700 Populus trichocarpa HOM05D001776 ORTHO05D001771 5.5e-06 54.7 93 41.9
THA.LOC104815317 Tarenaya hassleriana HOM05D001776 ORTHO05D001771 5.5e-06 54.7 86 41.9
arahy.Tifrunner.gnm1.ann1.N90ILP Arachis hypogaea HOM05D001776 ORTHO05D001771 7.2e-06 54.3 88 39.8
arahy.Tifrunner.gnm1.ann1.QSQE7C Arachis hypogaea HOM05D001776 ORTHO05D001771 7.2e-06 54.3 88 39.8
ClCG11G011500 Citrullus lanatus HOM05D001776 ORTHO05D001771 7.2e-06 54.3 84 44.0
AUR62028014 Chenopodium quinoa HOM05D001776 ORTHO05D001771 9.5e-06 53.9 95 35.8
TWI34G1874 Tripterygium wilfordii HOM05D001776 ORTHO05D001771 9.5e-06 53.9 69 49.3


User provided reference genes

Program Settings