Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00550 Erythranthe guttata HOM05D005820 ORTHO05D007116 0.0e+00 1399.8 728 100.0
MSTRG.19155 Avicennia marina HOM05D005820 ORTHO05D007116 1.0e-270 936.8 733 67.8
SGA_v2.0_scaffold75G24867 Striga asiatica HOM05D005820 ORTHO05D007116 5.5e-245 851.3 735 61.6
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 3.1e-203 712.6 741 53.8
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 4.3e-197 692.2 754 50.9
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 5.8e-194 681.8 762 50.3
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 4.2e-192 675.6 754 50.1
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 1.3e-188 664.1 751 49.1
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 9.0e-187 657.9 732 49.9
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 2.0e-186 656.8 747 48.9
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 3.4e-186 656.0 732 50.1
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 3.8e-185 652.5 736 48.0
Peaxi162Scf00046g02624 Petunia axillaris HOM05D005820 ORTHO05D007116 4.9e-185 652.1 731 47.6
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 9.3e-184 647.9 733 47.7
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 2.1e-183 646.7 745 48.3
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 6.0e-183 645.2 751 46.7
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 7.9e-183 644.8 759 47.0
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 1.3e-182 644.0 737 48.2
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 1.1e-181 641.0 744 48.8
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 3.3e-181 639.4 751 49.1
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.6e-180 637.1 751 48.6
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 1.4e-179 634.0 733 47.2
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 4.0e-179 632.5 748 47.3
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 4.5e-178 629.0 752 46.8
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 1.0e-177 627.9 756 46.2
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 1.3e-177 627.5 673 51.9
FvH4_7g34260 Fragaria vesca HOM05D005820 ORTHO05D007116 4.9e-177 625.5 729 48.4
FAN01G2368 Fragaria x ananassa HOM05D005820 ORTHO05D007116 6.5e-177 625.2 728 48.2
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 5.5e-176 622.1 676 50.9
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 9.3e-176 621.3 736 47.8
SalBow3G3950 Salvia bowleyana HOM05D005820 ORTHO05D007116 1.6e-175 620.5 540 59.4
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 3.0e-174 616.3 736 47.1
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 6.7e-174 615.1 754 46.2
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 1.5e-173 614.0 767 46.4
Lsat_1_v5_gn_9_46201 Lactuca sativa HOM05D005820 ORTHO05D007116 1.3e-172 610.9 746 47.2
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 2.4e-171 606.7 729 49.0
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 9.0e-171 604.7 680 50.0
RcHm_v2.0_Chr1g0384611 Rosa chinensis HOM05D005820 ORTHO05D007116 4.5e-170 602.4 744 46.2
FAN03G2216 Fragaria x ananassa HOM05D005820 ORTHO05D007116 7.6e-170 601.7 740 47.2
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 7.6e-170 601.7 743 45.6
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 1.7e-169 600.5 727 47.0
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 2.9e-169 599.7 720 48.5
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 2.9e-169 599.7 750 45.5
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 4.2e-168 595.9 735 46.3
Rhsim03G0224500 Rhododendron simsii HOM05D005820 ORTHO05D007116 1.6e-167 594.0 763 45.0
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 3.0e-166 589.7 781 43.8
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 9.7e-165 584.7 815 41.3
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 2.8e-164 583.2 751 46.5
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 3.7e-164 582.8 783 42.1
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 1.1e-163 581.3 741 46.0
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 1.8e-163 580.5 757 44.8
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 6.9e-163 578.6 745 45.6
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 6.9e-163 578.6 734 44.8
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 2.9e-161 573.2 803 43.0
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 2.9e-161 573.2 742 44.5
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 3.2e-160 569.7 739 42.9
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 5.5e-160 568.9 754 44.3
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 7.9e-159 565.1 709 44.0
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 8.8e-158 561.6 742 44.5
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 6.3e-156 555.4 752 44.0
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 1.5e-154 550.8 754 43.4
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 2.2e-153 547.0 743 41.5
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 8.5e-153 545.0 751 43.3
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 2.5e-152 543.5 787 42.6
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 5.5e-152 542.3 743 42.5
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 1.0e-150 538.1 756 40.7
TPR.G19809 Trifolium pratense HOM05D005820 ORTHO05D007116 2.3e-150 537.0 659 45.1
Eucgr.A02992 Eucalyptus grandis HOM05D005820 ORTHO05D007116 8.8e-150 535.0 736 42.3
Prupe.2G329300 Prunus persica HOM05D005820 ORTHO05D007116 4.4e-149 532.7 730 43.7
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 1.7e-148 530.8 804 39.6
FAN10G1332 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.2e-148 530.4 648 47.1
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 3.6e-143 513.1 613 46.0
ATR0829G080 Amborella trichopoda HOM05D005820 ORTHO05D007116 6.1e-143 512.3 669 43.6
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 1.4e-142 511.1 673 42.2
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 5.2e-142 509.2 680 42.9
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 1.2e-141 508.1 672 42.0
Os10g0402200 Oryza sativa ssp. japonica HOM05D005820 ORTHO05D007116 2.6e-141 506.9 744 39.0
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 2.7e-138 496.9 742 39.2
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 3.2e-136 490.0 721 42.2
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 2.8e-132 476.9 680 40.4
HPP92_000954 Vanilla planifolia HOM05D005820 ORTHO05D007116 1.4e-131 474.6 738 40.1
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 1.2e-127 461.5 515 49.9
CAN.G103.20 Capsicum annuum HOM05D005820 ORTHO05D007116 3.6e-127 459.9 571 45.9
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 2.0e-125 454.1 649 41.1
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 2.6e-117 427.2 435 52.6
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 4.1e-115 419.9 448 50.2
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 2.5e-112 410.6 529 44.8
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 1.5e-109 401.4 587 41.1
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 4.4e-101 373.2 521 42.6
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 7.8e-98 362.5 402 49.5
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 1.7e-97 361.3 446 45.7
AUR62042764 Chenopodium quinoa HOM05D005820 ORTHO05D007116 3.0e-97 360.5 590 37.8
PGSC0003DMG402015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 1.5e-96 358.2 350 53.4
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 8.1e-95 352.4 374 49.7
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis HOM05D005820 ORTHO05D007116 1.2e-90 338.6 695 31.8
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 5.1e-89 333.2 383 48.3
Ca_03104_v3 Cicer arietinum L. HOM05D005820 ORTHO05D007116 5.6e-88 329.7 426 44.8
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 4.4e-85 320.1 282 57.8
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 2.7e-82 310.8 350 48.3
PGSC0003DMG401015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 3.2e-75 287.3 336 45.5
Mapoly0140s0032 Marchantia polymorpha HOM05D005820 ORTHO05D007116 3.5e-74 283.9 811 30.6
SHI15005 Sapria himalayana HOM05D005820 ORTHO05D007116 4.6e-74 283.5 296 48.3
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 8.7e-73 279.3 251 57.4
SMO203G0218 Selaginella moellendorffii HOM05D005820 ORTHO05D007116 8.1e-71 272.7 702 29.9
arahy.Tifrunner.gnm1.ann1.86ZX86 Arachis hypogaea HOM05D005820 ORTHO05D007116 1.7e-68 265.0 376 39.9
Oeu001352.2 Olea europaea HOM05D005820 ORTHO05D007116 1.1e-67 262.3 266 54.5
Pp3c16_7630 Physcomitrium patens HOM05D005820 ORTHO05D007116 5.5e-67 260.0 956 25.8
MD01G1239300 Malus domestica HOM05D005820 ORTHO05D007116 2.7e-66 257.7 515 35.3
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 6.2e-63 246.5 263 52.1
Oeu046340.1 Olea europaea HOM05D005820 ORTHO05D007116 9.7e-56 222.6 168 65.5
Ciclev10032799m.g Citrus clementina HOM05D005820 ORTHO05D007116 7.9e-50 203.0 199 50.3
Lj3A884T57 Lonicera japonica HOM05D005820 ORTHO05D007116 1.1e-46 192.6 279 41.6
Lalb_Chr01g0000771 Lupinus albus HOM05D005820 ORTHO05D007116 6.9e-46 189.9 167 56.9
CAN.G824.56 Capsicum annuum HOM05D005820 ORTHO05D007116 2.2e-44 184.9 166 54.8
CBR_g52284 Chara braunii HOM05D005820 ORTHO05D007116 1.0e-41 176.0 890 22.9
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea HOM05D005820 ORTHO05D007116 1.8e-41 175.3 716 25.7
Nitab4.5_0010710g0040 Nicotiana tabacum HOM05D005820 ORTHO05D007116 1.1e-40 172.6 146 58.9
Cpa.g.sc43.143 Carica papaya HOM05D005820 ORTHO05D007116 8.2e-39 166.4 205 45.4
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea HOM05D005820 ORTHO05D007116 5.3e-38 163.7 708 25.0
AUR62022348 Chenopodium quinoa HOM05D005820 ORTHO05D007116 6.1e-26 123.6 99 62.6
Hma1.2p1_0419F.1_g149520 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 8.3e-23 113.2 120 48.3
CAN.G557.3 Capsicum annuum HOM05D005820 ORTHO05D007116 3.2e-19 101.3 145 45.5
SEGI_39455 Sequoiadendron giganteum HOM05D005820 ORTHO05D007116 4.0e-17 94.4 163 36.8
CAN.G1793.2 Capsicum annuum HOM05D005820 ORTHO05D007116 4.4e-08 64.3 45 66.7
COL.COLO4_37046 Corchorus olitorius HOM05D005820 ORTHO05D007116 4.9e-07 60.8 35 71.4


User provided reference genes

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