Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00225 Erythranthe guttata HOM05D007125 ORTHO05D008766 0.0e+00 2380.1 1182 100.0
SalBow5G1282 Salvia bowleyana HOM05D007125 ORTHO05D008766 0.0e+00 1251.9 1210 58.0
Oeu044362.1 Olea europaea HOM05D007125 ORTHO05D008766 4.3e-279 965.3 1169 48.2
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 8.4e-259 897.9 1247 44.3
MSTRG.19028 Avicennia marina HOM05D007125 ORTHO05D008766 1.5e-255 887.1 806 58.9
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 3.2e-250 869.4 1225 43.3
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 4.2e-250 869.0 1244 42.8
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 9.3e-250 867.8 1213 42.9
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 2.7e-249 866.3 1250 43.2
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 3.3e-247 859.4 1252 41.9
vmacro20236 Vaccinium macrocarpon HOM05D007125 ORTHO05D008766 4.9e-243 845.5 877 50.6
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 8.7e-232 808.1 1218 41.8
Solyc09g013160.3 Solanum lycopersicum HOM05D007125 ORTHO05D008766 8.7e-232 808.1 843 51.6
Sopen09g007020 Solanum pennellii HOM05D007125 ORTHO05D008766 7.4e-231 805.1 843 51.4
GSVIVG01034011001 Vitis vinifera HOM05D007125 ORTHO05D008766 1.8e-229 800.4 931 48.5
Ciclev10013588m.g Citrus clementina HOM05D007125 ORTHO05D008766 2.2e-227 793.5 934 47.9
Nitab4.5_0000008g0740 Nicotiana tabacum HOM05D007125 ORTHO05D008766 2.9e-227 793.1 847 50.4
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 3.2e-226 789.6 1231 40.4
Cpa.g.sc56.115 Carica papaya HOM05D007125 ORTHO05D008766 4.2e-226 789.3 844 50.2
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 1.0e-224 784.6 1204 40.8
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 1.1e-223 781.2 1220 40.2
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 1.5e-223 780.8 1267 37.9
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 4.3e-223 779.2 1285 39.8
Nitab4.5_0009193g0010 Nicotiana tabacum HOM05D007125 ORTHO05D008766 4.8e-222 775.8 852 49.8
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 1.8e-221 773.9 1228 40.6
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 3.1e-221 773.1 980 45.4
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 3.2e-218 763.1 1206 40.6
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 1.6e-217 760.8 1256 39.9
Sed0001650 Sechium edule HOM05D007125 ORTHO05D008766 2.6e-215 753.4 926 45.7
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 5.7e-215 752.3 1260 38.7
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 1.4e-213 747.7 1217 38.5
Hma1.2p1_0763F.1_g214640 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 7.0e-213 745.3 1013 43.9
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 3.8e-211 739.6 822 47.6
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 2.8e-206 723.4 1228 38.4
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 9.1e-205 718.4 1222 38.3
ClCG04G007250 Citrullus lanatus HOM05D007125 ORTHO05D008766 3.5e-204 716.5 1238 39.3
Lsat_1_v5_gn_8_99881 Lactuca sativa HOM05D007125 ORTHO05D008766 4.2e-202 709.5 1070 40.7
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 6.7e-200 702.2 1221 38.2
CARHR083450 Cardamine hirsuta HOM05D007125 ORTHO05D008766 5.9e-196 689.1 926 42.8
AL3G20150 Arabidopsis lyrata HOM05D007125 ORTHO05D008766 2.9e-195 686.8 1215 37.6
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 1.6e-193 681.0 1229 37.9
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 1.6e-193 681.0 1286 37.4
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 2.1e-193 680.6 1161 38.1
Carub.0003s0824 Capsella rubella HOM05D007125 ORTHO05D008766 5.2e-192 676.0 1203 37.0
ECA236G2625 Erigeron canadensis HOM05D007125 ORTHO05D008766 3.4e-191 673.3 1204 36.6
BcaC09g48007 Brassica carinata HOM05D007125 ORTHO05D008766 1.7e-190 671.0 1196 37.5
Ca_09172_v3 Cicer arietinum L. HOM05D007125 ORTHO05D008766 1.4e-189 667.9 1205 37.5
TPR.G1550 Trifolium pratense HOM05D007125 ORTHO05D008766 1.6e-188 664.5 731 49.7
BraA01t04316Z Brassica rapa HOM05D007125 ORTHO05D008766 3.8e-187 659.8 921 42.1
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 1.5e-186 657.9 1236 36.9
THA.LOC104823281 Tarenaya hassleriana HOM05D007125 ORTHO05D008766 1.2e-185 654.8 937 41.3
BolC1t05475H Brassica oleracea HOM05D007125 ORTHO05D008766 3.0e-184 650.2 931 41.5
AT3G09080 Arabidopsis thaliana HOM05D007125 ORTHO05D008766 6.8e-184 649.0 1202 36.3
Lalb_Chr03g0042991 Lupinus albus HOM05D007125 ORTHO05D008766 2.5e-178 630.6 1116 37.7
ATR0618G048 Amborella trichopoda HOM05D007125 ORTHO05D008766 1.4e-173 614.8 968 38.2
MELO3C003224.2 Cucumis melo HOM05D007125 ORTHO05D008766 1.0e-171 608.6 1253 35.8
Gorai.006G180600 Gossypium raimondii HOM05D007125 ORTHO05D008766 1.3e-163 581.6 1016 37.2
HanXRQChr04g0102021 Helianthus annuus HOM05D007125 ORTHO05D008766 5.1e-163 579.7 643 49.5
Gohir.D09G158900 Gossypium hirsutum HOM05D007125 ORTHO05D008766 1.9e-162 577.8 1022 36.8
VMungo1383G2599 Vigna mungo HOM05D007125 ORTHO05D008766 1.6e-161 574.7 1147 35.6
Sp3g07530 Schrenkiella parvula HOM05D007125 ORTHO05D008766 2.3e-160 570.9 834 41.2
CDE04G1007 Ceratophyllum demersum HOM05D007125 ORTHO05D008766 8.9e-152 542.3 948 36.5
Manes.08G087700 Manihot esculenta HOM05D007125 ORTHO05D008766 9.9e-151 538.9 974 37.8
Pp3c9_8840 Physcomitrium patens HOM05D007125 ORTHO05D008766 4.9e-142 510.0 964 33.5
Aa31LG3G1610 Aethionema arabicum HOM05D007125 ORTHO05D008766 1.1e-141 508.8 974 35.7
Mapoly0113s0048 Marchantia polymorpha HOM05D007125 ORTHO05D008766 1.1e-138 498.8 879 34.8
Thhalv10022253m.g Eutrema salsugineum HOM05D007125 ORTHO05D008766 3.4e-135 487.3 910 36.6
SMO358G0023 Selaginella moellendorffii HOM05D007125 ORTHO05D008766 9.3e-133 479.2 884 34.4
PGSC0003DMG400020348 Solanum tuberosum HOM05D007125 ORTHO05D008766 3.5e-132 477.2 511 51.5
Pp3c3_16960 Physcomitrium patens HOM05D007125 ORTHO05D008766 2.6e-127 461.1 746 36.3
AagrBONN_evm.TU.Sc2ySwM_228.1352 Anthoceros agrestis HOM05D007125 ORTHO05D008766 2.2e-126 458.0 847 35.2
Atru.chr8.2198 Acer truncatum HOM05D007125 ORTHO05D008766 1.3e-123 448.7 839 35.9
Sc01g0006770 Simmondsia chinensis HOM05D007125 ORTHO05D008766 2.1e-121 441.4 513 47.8
Gohir.A09G163400 Gossypium hirsutum HOM05D007125 ORTHO05D008766 2.8e-121 441.0 815 35.8
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 4.2e-117 427.2 805 36.9
Medtr7g066770 Medicago truncatula HOM05D007125 ORTHO05D008766 6.1e-116 423.3 453 50.8
unitig_27.g24821 Utricularia gibba HOM05D007125 ORTHO05D008766 4.4e-66 257.7 567 34.0
SEGI_28201 Sequoiadendron giganteum HOM05D007125 ORTHO05D008766 6.2e-60 237.3 353 38.0
Cre01.g034600 Chlamydomonas reinhardtii HOM05D007125 ORTHO05D008766 1.6e-55 222.6 828 23.9
Medtr7g066750 Medicago truncatula HOM05D007125 ORTHO05D008766 1.7e-54 219.2 598 30.4
HanXRQChr04g0102011 Helianthus annuus HOM05D007125 ORTHO05D008766 4.7e-52 211.1 593 28.8
MCO08G172 Micromonas commoda HOM05D007125 ORTHO05D008766 1.4e-48 199.5 878 23.7
MSTRG.19029 Avicennia marina HOM05D007125 ORTHO05D008766 3.1e-43 181.8 106 82.1
Sc01g0006790 Simmondsia chinensis HOM05D007125 ORTHO05D008766 7.1e-40 170.6 583 27.8
arahy.Tifrunner.gnm1.ann1.IUS8SN Arachis hypogaea HOM05D007125 ORTHO05D008766 4.6e-39 167.9 255 40.0
Atru.chr8.2197 Acer truncatum HOM05D007125 ORTHO05D008766 1.7e-38 166.0 178 50.0
arahy.Tifrunner.gnm1.ann1.KE62B1 Arachis hypogaea HOM05D007125 ORTHO05D008766 3.0e-38 165.2 255 39.6
arahy.Tifrunner.gnm1.ann1.KIE2XR Arachis hypogaea HOM05D007125 ORTHO05D008766 3.3e-37 161.8 255 39.2
BolC1t05511H Brassica oleracea HOM05D007125 ORTHO05D008766 1.3e-22 113.2 118 50.8
VMungo1383G1324 Vigna mungo HOM05D007125 ORTHO05D008766 6.6e-22 110.9 88 63.6
Lalb_Chr03g0042981 Lupinus albus HOM05D007125 ORTHO05D008766 2.1e-20 105.9 89 59.6
unitig_27.g24820 Utricularia gibba HOM05D007125 ORTHO05D008766 3.6e-20 105.1 91 61.5
CSS0006466 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 2.0e-18 99.4 88 55.7
Actinidia13779 Actinidia chinensis HOM05D007125 ORTHO05D008766 2.6e-18 99.0 88 56.8
Sc01g0006780 Simmondsia chinensis HOM05D007125 ORTHO05D008766 4.9e-17 94.7 111 43.2
MBI11_g31733_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 3.5e-15 88.6 59 64.4
Cfa025266 Carpinus fangiana HOM05D007125 ORTHO05D008766 3.1e-11 75.5 241 28.2
MCO06G281 Micromonas commoda HOM05D037949 ORTHO05D034420 2.9e-09 68.9 184 28.3
TPR.G1592 Trifolium pratense HOM05D007125 ORTHO05D008766 6.5e-09 67.8 134 32.1
PRCOL_00005200 Prasinoderma coloniale HOM05D009332 ORTHO05D011893 2.1e-07 62.8 155 27.1
Cre14.g613400 Chlamydomonas reinhardtii HOM05D037949 ORTHO05D034420 3.5e-07 62.0 174 24.7
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 7.9e-07 60.8 261 24.1
Sed0021710 Sechium edule HOM05D007125 ORTHO05D008766 3.9e-06 58.5 67 44.8


User provided reference genes

Program Settings