Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 1.3e-161 573.2 329 100.0
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 5.8e-93 345.1 321 72.6
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 1.5e-85 320.5 307 65.5
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 2.1e-82 310.1 357 56.3
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 1.5e-80 303.9 366 54.6
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 2.5e-80 303.1 366 54.4
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 4.5e-77 292.4 352 57.1
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 5.0e-76 288.9 337 61.1
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 3.6e-74 282.7 288 59.0
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 3.6e-74 282.7 338 56.5
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 4.6e-74 282.3 257 67.3
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 1.7e-71 273.9 247 72.5
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 2.2e-71 273.5 334 56.6
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 6.3e-71 271.9 307 62.9
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 1.8e-70 270.4 279 59.1
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 5.3e-70 268.9 174 78.2
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 1.2e-69 267.7 279 55.2
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.0e-69 266.9 328 55.2
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 3.4e-69 266.2 349 51.9
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 7.7e-69 265.0 355 54.1
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 1.3e-68 264.2 328 54.9
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 2.2e-68 263.5 174 77.0
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 3.8e-68 262.7 174 78.2
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 6.5e-68 261.9 176 77.8
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 1.4e-67 260.8 313 51.4
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 1.4e-67 260.8 275 62.2
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 2.5e-67 260.0 328 57.3
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 4.2e-67 259.2 343 53.4
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 1.6e-66 257.3 332 51.8
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 2.1e-66 256.9 174 74.7
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 6.1e-66 255.4 341 51.9
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 7.9e-66 255.0 172 74.4
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 7.9e-66 255.0 172 74.4
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 7.9e-66 255.0 172 74.4
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 1.0e-65 254.6 318 50.9
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 3.9e-65 252.7 350 47.4
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 5.1e-65 252.3 174 73.0
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 5.1e-65 252.3 174 73.6
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 5.1e-65 252.3 174 73.6
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 6.7e-65 251.9 174 73.6
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 1.5e-64 250.8 275 55.3
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 2.0e-64 250.4 317 50.5
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 2.6e-64 250.0 331 52.0
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 4.4e-64 249.2 322 49.7
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 4.4e-64 249.2 174 73.0
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 4.4e-64 249.2 298 53.0
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 4.4e-64 249.2 174 72.4
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 5.7e-64 248.8 346 50.9
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 9.7e-64 248.1 328 51.5
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.7e-63 247.3 172 73.3
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 2.8e-63 246.5 325 48.6
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 3.7e-63 246.1 170 74.1
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.1e-62 244.6 337 49.0
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.4e-62 244.2 334 48.8
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.4e-62 244.2 375 47.7
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 4.1e-62 242.7 162 75.9
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 4.1e-62 242.7 162 75.9
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 5.3e-62 242.3 329 52.0
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 5.3e-62 242.3 328 47.0
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.5e-61 240.7 259 52.5
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 2.0e-61 240.4 336 49.4
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 1.3e-60 237.7 211 63.0
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 3.8e-60 236.1 162 74.7
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.8e-60 236.1 170 72.9
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 6.5e-60 235.3 375 48.8
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 6.5e-60 235.3 282 57.1
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 8.5e-60 235.0 169 74.6
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.1e-59 234.6 170 72.4
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 1.1e-59 234.6 174 69.0
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 2.5e-59 233.4 174 69.0
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 1.2e-58 231.1 170 72.9
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 2.1e-58 230.3 308 47.7
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 2.7e-58 229.9 342 49.4
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 1.0e-57 228.0 171 69.0
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 1.8e-57 227.3 162 73.5
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 1.8e-57 227.3 170 71.8
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 2.3e-57 226.9 200 65.0
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 3.9e-57 226.1 371 43.7
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 5.2e-57 225.7 174 69.0
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 5.2e-57 225.7 174 69.0
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 8.8e-57 224.9 161 73.9
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 2.6e-56 223.4 172 69.8
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 1.7e-55 220.7 173 69.9
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 2.2e-55 220.3 173 68.2
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.8e-55 219.9 168 70.2
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 3.1e-54 216.5 168 69.0
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 7.0e-54 215.3 318 46.9
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 9.1e-54 214.9 165 71.5
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 5.9e-53 212.2 162 69.8
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.7e-52 210.7 162 69.8
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 2.5e-51 206.8 173 62.4
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 2.5e-51 206.8 292 49.7
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 9.4e-51 204.9 161 70.8
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 3.0e-49 199.9 313 44.7
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 5.7e-48 195.7 300 44.3
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 3.1e-46 189.9 268 45.5
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 3.1e-46 189.9 164 62.8
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 9.1e-46 188.3 174 60.3
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 1.6e-45 187.6 162 61.7
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 2.2e-44 183.7 124 77.4
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.5e-43 181.0 135 71.9
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.5e-43 181.0 135 71.9
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 9.4e-43 178.3 163 60.1
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 1.2e-42 177.9 296 45.9
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 4.7e-42 176.0 174 59.8
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 8.3e-39 165.2 104 81.7
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 2.0e-37 160.6 117 74.4
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 4.5e-37 159.5 121 71.9
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 9.5e-27 125.2 168 42.9
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 2.1e-26 124.0 168 45.2
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 3.4e-24 116.7 107 61.7
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 3.7e-23 113.2 64 87.5
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 2.0e-21 107.5 71 76.1
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 3.6e-18 96.7 113 52.2
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 9.8e-16 88.6 224 39.7
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 6.4e-15 85.9 172 51.2
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 5.4e-14 82.8 194 38.7
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 1.2e-13 81.6 73 63.0
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 6.6e-12 75.9 151 46.4
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 9.5e-11 72.0 40 85.0
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.8e-10 70.5 39 84.6
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 4.7e-10 69.7 174 32.8
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 4.7e-10 69.7 195 34.4
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 1.4e-09 68.2 79 50.6
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 2.0e-08 64.3 106 42.5


User provided reference genes

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