Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 3.0e-155 553.1 691 100.0
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 3.8e-102 376.7 316 76.3
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 2.2e-86 324.3 316 68.4
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 9.4e-85 318.9 308 67.9
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 1.1e-77 295.4 306 63.1
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 6.1e-68 263.1 259 68.3
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 6.1e-68 263.1 259 68.3
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 1.0e-67 262.3 262 66.4
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 3.0e-67 260.8 272 57.7
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 5.2e-67 260.0 298 60.1
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 5.2e-67 260.0 280 63.2
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.2e-66 258.8 272 57.4
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 1.5e-66 258.5 311 59.8
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 3.4e-66 257.3 262 66.4
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 5.7e-66 256.5 257 67.3
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 1.3e-65 255.4 258 68.2
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 1.7e-65 255.0 293 61.8
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 3.7e-65 253.8 258 68.2
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 4.8e-65 253.4 260 64.6
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 8.3e-65 252.7 290 63.4
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 1.4e-64 251.9 291 59.5
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 1.8e-64 251.5 260 65.4
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 5.4e-64 250.0 258 67.4
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 5.4e-64 250.0 300 61.7
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 5.4e-64 250.0 257 67.7
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 9.1e-64 249.2 293 58.0
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 1.6e-63 248.4 258 66.3
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 1.6e-63 248.4 292 60.6
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 2.0e-63 248.1 265 65.7
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 3.5e-63 247.3 258 65.9
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 7.7e-63 246.1 290 60.3
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 1.7e-62 245.0 261 64.4
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 5.0e-62 243.4 292 59.6
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 5.0e-62 243.4 292 60.3
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 3.3e-61 240.7 249 65.5
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 9.5e-61 239.2 269 61.0
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.2e-60 238.8 290 59.7
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 6.1e-60 236.5 290 59.3
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 8.0e-60 236.1 270 60.4
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 8.0e-60 236.1 270 60.4
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 1.8e-59 235.0 287 61.0
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 4.0e-59 233.8 261 62.8
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 1.7e-57 228.4 259 56.8
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 2.8e-57 227.6 261 62.8
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 3.7e-57 227.3 266 60.5
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 3.7e-57 227.3 258 64.0
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 3.7e-57 227.3 292 58.9
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 1.4e-56 225.3 290 56.6
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 4.1e-56 223.8 257 63.0
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 1.2e-55 222.2 282 59.2
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.6e-55 221.9 260 56.2
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 2.0e-55 221.5 308 56.2
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 3.5e-55 220.7 258 62.0
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 4.5e-55 220.3 277 58.8
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 2.3e-54 218.0 264 56.4
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 2.9e-54 217.6 274 59.5
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 3.9e-54 217.2 274 59.1
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 3.9e-54 217.2 274 59.1
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 5.0e-54 216.9 274 58.8
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 8.6e-54 216.1 297 56.2
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 5.6e-53 213.4 270 58.9
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 1.2e-52 212.2 276 59.4
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 8.0e-52 209.5 273 57.5
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 2.3e-51 208.0 274 56.9
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 2.3e-51 208.0 260 46.5
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 3.1e-51 207.6 274 58.0
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 4.4e-50 203.8 260 60.0
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 4.4e-50 203.8 282 55.0
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 7.5e-50 203.0 282 54.3
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 9.8e-50 202.6 260 58.5
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 1.3e-49 202.2 274 55.5
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 1.3e-49 202.2 279 56.6
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 4.9e-49 200.3 251 60.2
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 4.9e-49 200.3 260 58.1
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 5.0e-46 190.3 218 66.5
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 5.6e-45 186.8 235 58.3
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 4.0e-43 180.6 219 62.6
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 2.9e-41 174.5 234 59.8
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 3.2e-40 171.0 260 53.8
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 9.2e-40 169.5 227 59.5
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 3.5e-39 167.5 220 60.9
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 4.6e-39 167.2 220 60.9
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 1.0e-38 166.0 228 59.2
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 6.6e-38 163.3 225 58.7
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 5.6e-37 160.2 258 53.9
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 9.5e-37 159.5 262 38.5
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 1.2e-36 159.1 220 59.1
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 3.6e-36 157.5 222 59.0
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 6.2e-36 156.8 221 59.3
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 8.1e-36 156.4 144 52.8
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 4.4e-34 150.6 222 57.7
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 2.9e-33 147.9 221 55.2
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 1.9e-32 145.2 131 53.4
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 2.4e-32 144.8 295 47.5
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 2.1e-31 141.7 221 54.8
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 3.3e-29 134.4 218 54.1
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 9.6e-29 132.9 218 53.7
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 2.0e-26 125.2 87 65.5
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 2.6e-26 124.8 255 50.2
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 1.6e-15 89.0 231 29.9
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 2.1e-15 88.6 70 60.0
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 1.3e-14 85.9 69 58.0
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 1.3e-14 85.9 241 31.1
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 2.3e-14 85.1 61 63.9
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 2.3e-14 85.1 61 63.9
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 6.2e-12 77.0 163 30.1
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 6.9e-11 73.6 57 57.9
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 1.5e-10 72.4 43 72.1
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 4.2e-08 64.3 141 26.2
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 7.1e-08 63.5 46 63.0
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 3.9e-06 57.8 70 41.4
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 8.7e-06 56.6 121 27.3


User provided reference genes

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