Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 0.0e+00 1198.3 598 100.0
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 8.5e-276 953.4 589 80.3
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 5.5e-275 950.7 589 80.1
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 8.8e-265 916.8 572 77.8
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 2.2e-263 912.1 568 77.6
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 1.4e-257 892.9 578 75.3
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 5.2e-257 891.0 565 77.0
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 3.4e-256 888.3 585 74.7
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 5.7e-256 887.5 565 76.8
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 5.7e-256 887.5 564 76.2
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.2e-255 885.6 549 78.5
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 1.1e-254 883.2 574 74.7
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 1.8e-254 882.5 548 78.5
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 1.8e-254 882.5 548 77.4
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 2.0e-253 879.0 547 77.5
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 3.8e-252 874.8 550 77.5
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 8.6e-252 873.6 564 75.4
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 4.3e-251 871.3 565 76.1
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 7.2e-251 870.5 565 75.9
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 9.5e-251 870.2 565 76.1
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.2e-250 869.8 575 74.1
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 3.6e-250 868.2 563 76.4
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 6.1e-250 867.5 563 75.3
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 1.0e-249 866.7 584 73.8
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 1.8e-249 865.9 564 75.7
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 1.2e-248 863.2 585 73.2
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 2.6e-248 862.1 552 76.8
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 2.6e-248 862.1 549 75.8
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 9.8e-248 860.1 564 73.6
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 1.7e-247 859.4 563 74.6
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 2.2e-247 859.0 565 74.3
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 6.4e-247 857.4 549 74.9
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 1.4e-246 856.3 541 77.1
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 1.4e-246 856.3 644 67.7
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 2.4e-246 855.5 565 72.0
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 4.1e-246 854.7 564 73.9
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 1.6e-245 852.8 549 74.0
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 5.0e-244 847.8 549 75.2
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 1.1e-243 846.7 548 74.8
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 9.5e-243 843.6 549 74.0
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 1.2e-242 843.2 569 72.8
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 3.6e-242 841.6 564 73.6
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 3.6e-242 841.6 549 73.4
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 6.2e-242 840.9 549 74.0
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 1.0e-241 840.1 548 73.5
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 1.0e-241 840.1 648 67.1
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 3.1e-241 838.6 565 73.5
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 2.6e-240 835.5 578 71.8
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 3.4e-240 835.1 549 74.3
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 7.5e-240 833.9 578 70.2
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 4.9e-239 831.2 565 73.1
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 5.4e-238 827.8 567 72.3
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 1.6e-237 826.2 588 69.9
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 6.6e-236 820.8 573 70.2
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 2.9e-231 805.4 549 70.5
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 3.7e-231 805.1 579 70.5
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 2.4e-230 802.4 555 72.1
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 3.2e-230 802.0 549 71.2
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 6.0e-229 797.7 549 70.9
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 2.3e-228 795.8 550 69.8
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 3.0e-228 795.4 549 69.9
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 5.1e-228 794.7 549 69.9
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 5.1e-228 794.7 549 71.0
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 8.6e-228 793.9 549 69.8
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 1.1e-227 793.5 549 69.6
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 1.9e-227 792.7 542 71.0
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 1.9e-227 792.7 549 69.8
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 9.5e-227 790.4 549 70.1
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 3.6e-226 788.5 576 69.3
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 1.4e-225 786.6 549 69.0
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 3.1e-225 785.4 575 68.2
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 5.2e-225 784.6 548 69.7
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 1.5e-224 783.1 507 74.0
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 2.9e-223 778.9 547 69.3
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 3.2e-222 775.4 528 74.4
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 2.7e-221 772.3 476 79.0
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.3e-219 765.4 549 68.7
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 1.1e-217 760.4 553 69.6
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 4.0e-217 758.4 585 62.7
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 1.4e-214 750.0 549 67.2
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 3.4e-208 728.8 458 77.5
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 1.4e-206 723.4 613 62.0
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 3.9e-204 715.3 515 68.7
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 3.6e-202 708.8 489 71.6
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 8.1e-202 707.6 473 70.0
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 9.0e-201 704.1 549 65.8
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 2.9e-191 672.5 562 63.3
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 1.3e-186 657.1 549 57.7
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 1.5e-184 650.2 446 73.8
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 2.9e-183 646.0 562 56.4
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 1.3e-170 604.0 522 58.4
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 8.2e-170 601.3 592 58.1
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 1.2e-168 597.4 577 56.5
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 4.5e-152 542.3 322 79.2
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 4.2e-150 535.8 316 78.8
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 4.7e-149 532.3 338 76.6
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 5.2e-148 528.9 345 74.8
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 7.7e-144 515.0 527 54.1
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 8.5e-143 511.5 344 69.8
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 1.5e-134 484.2 447 56.8
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 4.4e-131 472.6 346 66.8
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 5.7e-131 472.2 577 43.2
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 4.3e-126 456.1 314 72.0
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 1.2e-117 427.9 388 58.8
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 1.6e-109 401.0 365 54.8
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 1.5e-99 367.9 250 72.8
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 4.6e-96 356.3 627 35.2
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 2.5e-94 350.5 205 80.5
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 6.7e-87 325.9 242 66.9
MBI19_g40900_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 2.0e-54 218.0 140 71.4
SEGI_31657 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.8e-53 214.2 160 62.5
COL.COLO4_21854 Corchorus olitorius HOM05D002380 ORTHO05D008286 5.9e-43 179.9 129 65.9
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 1.3e-42 178.7 130 60.8
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 5.5e-41 173.3 161 57.1
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 1.2e-40 172.2 99 76.8
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 1.2e-30 139.0 93 66.7
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.3e-29 135.6 163 49.7
CBR_g12620 Chara braunii HOM05D005350 ORTHO05D008838 2.3e-26 124.8 100 52.0
SEGI_28059 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 6.5e-26 123.2 69 81.2
Actinidia09730 Actinidia chinensis HOM05D002380 ORTHO05D008286 7.8e-19 99.8 112 48.2
LjContig00564g0015808 Lotus japonicus HOM05D002380 ORTHO05D008286 7.8e-19 99.8 63 66.7
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 1.6e-16 92.0 69 69.6
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 1.2e-14 85.9 94 39.4
SEGI_40123 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 1.8e-12 78.6 42 85.7
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 1.0e-10 72.8 40 82.5
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 1.4e-07 62.4 57 64.9
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 3.1e-07 61.2 74 47.3


User provided reference genes

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