Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.7e-88 329.3 173 100.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 2.8e-78 295.4 173 89.6
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.4e-74 283.1 178 87.1
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 6.0e-73 277.7 173 82.1
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.7e-72 276.2 173 83.2
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 5.1e-72 274.6 173 82.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.5e-71 273.1 173 80.3
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.5e-71 272.3 173 79.2
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.5e-71 272.3 173 79.2
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.5e-71 272.3 173 79.2
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 4.3e-71 271.6 173 79.8
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 3.1e-69 265.4 173 77.5
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 4.0e-69 265.0 173 80.3
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 1.2e-68 263.5 173 77.5
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.5e-68 263.1 173 80.3
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 1.5e-68 263.1 173 80.3
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 4.5e-68 261.5 173 76.3
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 5.8e-68 261.2 174 75.3
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.3e-67 260.0 173 76.9
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 1.7e-67 259.6 173 76.9
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 2.2e-67 259.2 174 77.6
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 2.9e-67 258.8 173 76.3
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 3.8e-67 258.5 175 78.3
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 3.8e-67 258.5 172 77.3
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 4.9e-67 258.1 174 77.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 6.4e-67 257.7 173 79.2
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 8.4e-67 257.3 174 77.0
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.1e-66 256.9 173 78.0
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.9e-66 256.1 175 78.9
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 2.4e-66 255.8 174 78.2
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 2.4e-66 255.8 174 77.6
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 4.2e-66 255.0 173 78.0
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 7.1e-66 254.2 176 75.6
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 9.3e-66 253.8 173 74.6
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.2e-65 253.4 174 76.4
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 2.1e-65 252.7 173 74.6
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 2.7e-65 252.3 174 75.9
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 1.0e-64 250.4 174 77.0
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.0e-64 250.4 174 77.0
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.0e-64 250.4 174 77.0
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.3e-64 250.0 175 77.7
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.3e-64 249.2 174 77.0
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 3.9e-64 248.4 174 76.4
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 8.7e-64 247.3 166 77.7
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 1.1e-63 246.9 173 74.6
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.5e-63 246.5 173 76.3
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 1.9e-63 246.1 174 75.3
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 3.3e-63 245.4 175 74.9
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 4.3e-63 245.0 165 77.0
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 7.4e-63 244.2 174 74.1
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.3e-62 243.4 167 77.2
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 1.6e-62 243.0 175 76.6
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 3.7e-62 241.9 173 73.4
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 6.2e-62 241.1 175 74.9
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 8.1e-62 240.7 173 74.0
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 5.3e-61 238.0 176 72.7
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.2e-60 236.9 175 73.1
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 2.0e-60 236.1 176 72.2
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.0e-60 236.1 174 73.0
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 2.0e-60 236.1 174 71.8
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 5.8e-60 234.6 172 73.3
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 5.8e-60 234.6 175 70.9
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 1.7e-59 233.0 182 70.3
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 6.5e-59 231.1 165 75.2
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 1.1e-58 230.3 174 72.4
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 5.5e-58 228.0 176 70.5
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 9.3e-58 227.3 175 71.4
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 1.6e-57 226.5 177 70.1
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 6.0e-57 224.6 176 68.8
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 6.0e-57 224.6 175 69.7
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 3.0e-56 222.2 175 69.7
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 3.9e-56 221.9 153 77.1
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 5.1e-56 221.5 175 68.0
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 6.7e-56 221.1 175 69.1
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 6.7e-56 221.1 175 69.1
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 6.7e-56 221.1 175 69.1
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-55 220.3 175 68.6
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.5e-55 219.9 175 68.6
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 2.5e-55 219.2 175 68.6
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 4.3e-55 218.4 175 68.0
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 4.3e-55 218.4 166 71.7
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.3e-54 216.9 175 67.4
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.3e-54 216.9 175 67.4
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 1.6e-54 216.5 175 67.4
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 6.2e-54 214.5 138 76.8
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.0e-51 207.2 151 76.8
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 1.0e-51 207.2 174 64.9
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 2.2e-51 206.1 176 63.1
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 5.0e-51 204.9 169 68.6
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 5.0e-51 204.9 140 72.1
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 2.5e-50 202.6 173 63.0
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 1.6e-49 199.9 151 74.2
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 7.9e-49 197.6 175 60.6
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 5.7e-47 191.4 173 60.7
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 7.4e-47 191.0 151 68.9
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 1.2e-44 183.7 159 64.2
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 8.5e-43 177.6 173 59.0
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 5.5e-42 174.9 137 75.9
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 9.4e-42 174.1 165 61.8
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 1.0e-40 170.6 180 52.8
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 3.7e-38 162.2 136 66.9
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 6.3e-38 161.4 136 66.9
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 6.3e-38 161.4 144 68.8
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 4.1e-37 158.7 117 75.2
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 2.9e-35 152.5 114 75.4
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-31 140.2 155 55.5
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 6.3e-30 134.8 106 71.7
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.4e-29 133.7 112 69.6
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.4e-29 132.9 108 69.4
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 8.8e-24 114.4 166 41.0
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 2.0e-23 113.2 166 44.0
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 2.6e-23 112.8 98 68.4
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 5.9e-20 101.7 106 59.4
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 7.7e-20 101.3 69 79.7
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 3.0e-16 89.4 97 57.7
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 1.2e-15 87.4 83 62.7
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 1.7e-14 83.6 121 50.4
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 4.1e-13 79.0 105 53.3
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 1.2e-12 77.4 70 60.0
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 5.9e-12 75.1 59 67.8
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 1.0e-11 74.3 96 52.1
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.7e-11 73.6 59 66.1
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 1.7e-11 73.6 59 66.1
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 2.9e-11 72.8 59 66.1
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 2.9e-11 72.8 76 53.9
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 6.5e-11 71.6 59 64.4
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 6.5e-11 71.6 97 50.5
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-10 70.5 60 66.7
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 5.5e-10 68.6 92 51.1
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 9.4e-10 67.8 59 64.4
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-07 60.5 43 76.7
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 5.7e-07 58.5 43 74.4
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 7.5e-07 58.2 145 34.5
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 1.7e-06 57.0 79 46.8
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 2.2e-06 56.6 43 72.1
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 2.2e-06 56.6 71 50.7
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 2.8e-06 56.2 102 44.1
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 4.9e-06 55.5 40 80.0


User provided reference genes

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