Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00583 Erythranthe guttata HOM05D003926 ORTHO05D005273 0.0e+00 1260.4 641 100.0
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 3.1e-308 1061.2 655 82.0
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 1.8e-284 982.2 654 76.9
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 2.5e-281 971.8 660 75.6
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 1.6e-280 969.1 660 75.2
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 8.8e-279 963.4 660 75.8
COL.COLO4_10659 Corchorus olitorius HOM05D003926 ORTHO05D005273 5.7e-278 960.7 644 75.8
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.4e-276 955.3 663 75.1
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.4e-276 955.3 663 75.1
Gohir.A07G178700 Gossypium hirsutum HOM05D003926 ORTHO05D005273 3.1e-276 954.9 648 75.2
Gohir.D07G186000 Gossypium hirsutum HOM05D003926 ORTHO05D005273 2.7e-275 951.8 648 75.2
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 3.5e-275 951.4 648 75.2
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 7.7e-275 950.3 659 73.7
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 2.2e-274 948.7 656 74.5
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 1.1e-273 946.4 661 73.7
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 1.9e-273 945.7 652 75.0
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 3.2e-273 944.9 644 74.2
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 1.8e-271 939.1 661 72.8
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 2.3e-271 938.7 662 73.0
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 4.0e-271 937.9 661 73.5
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 2.6e-270 935.3 647 73.9
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 4.4e-270 934.5 652 73.8
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 4.4e-270 934.5 653 74.1
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 4.4e-270 934.5 658 72.9
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 4.8e-269 931.0 662 71.8
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 8.3e-269 930.2 662 71.8
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 8.3e-269 930.2 668 71.7
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 2.4e-268 928.7 658 73.3
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 2.4e-268 928.7 648 73.0
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 5.4e-268 927.5 659 72.5
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 2.0e-267 925.6 661 71.3
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 2.7e-267 925.2 655 72.8
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 4.5e-267 924.5 648 73.9
Eucgr.I02068 Eucalyptus grandis HOM05D003926 ORTHO05D005273 2.3e-266 922.2 659 72.1
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 5.0e-266 921.0 652 73.0
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 6.5e-266 920.6 652 73.0
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 6.5e-266 920.6 669 71.3
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 8.6e-266 920.2 662 72.4
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 8.6e-266 920.2 661 71.3
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 3.2e-265 918.3 660 72.9
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 3.2e-265 918.3 644 72.5
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 4.2e-265 917.9 661 71.4
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 1.2e-264 916.4 654 72.9
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 1.6e-264 916.0 659 70.9
Glyma.08G252650 Glycine max HOM05D003926 ORTHO05D005273 1.4e-263 912.9 664 71.1
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 1.4e-263 912.9 660 71.7
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 1.8e-263 912.5 659 70.9
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 3.0e-263 911.8 647 72.3
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 8.8e-263 910.2 662 70.2
Lj1g0000156 Lotus japonicus HOM05D003926 ORTHO05D005273 1.7e-261 906.0 661 69.3
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 1.7e-261 906.0 661 69.3
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 2.2e-261 905.6 660 70.2
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 2.8e-261 905.2 656 70.0
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 3.7e-261 904.8 660 70.5
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 4.9e-261 904.4 655 70.7
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 8.3e-261 903.7 661 71.0
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 2.4e-260 902.1 654 71.6
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 4.1e-260 901.4 657 70.2
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 5.4e-260 901.0 649 71.3
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 1.2e-259 899.8 654 69.6
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 1.6e-259 899.4 667 69.1
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 2.7e-259 898.7 648 69.8
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 5.9e-259 897.5 652 70.6
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 2.3e-258 895.6 649 69.8
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 2.3e-258 895.6 649 69.6
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 3.8e-258 894.8 650 69.4
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 8.6e-258 893.6 650 69.2
A05p45140 Brassica napus HOM05D003926 ORTHO05D005273 1.5e-257 892.9 651 69.4
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 1.5e-257 892.9 651 69.4
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 2.5e-257 892.1 656 69.2
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 9.5e-257 890.2 662 70.1
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 1.2e-256 889.8 662 69.2
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 6.8e-255 884.0 653 69.7
CDE01G0480 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 1.2e-254 883.2 642 71.2
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 9.8e-246 853.6 655 67.9
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 3.5e-243 845.1 668 67.5
BcaC05g30340 Brassica carinata HOM05D003926 ORTHO05D005273 1.0e-242 843.6 655 66.4
Cpa.g.sc14.238 Carica papaya HOM05D003926 ORTHO05D005273 3.6e-240 835.1 648 67.7
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 1.2e-238 830.1 676 63.6
HPP92_020589 Vanilla planifolia HOM05D003926 ORTHO05D005273 1.7e-237 826.2 658 65.5
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 3.9e-234 815.1 655 65.5
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 3.8e-229 798.5 657 64.5
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 5.3e-215 751.5 480 80.2
SMO361G0659 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 6.9e-215 751.1 651 60.1
SHI25822 Sapria himalayana HOM05D003926 ORTHO05D005273 1.9e-212 743.0 644 62.3
Mapoly0031s0115 Marchantia polymorpha HOM05D003926 ORTHO05D005273 3.2e-212 742.3 681 57.1
Pp3c11_22340 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.1e-208 729.6 678 56.9
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 4.8e-208 728.4 535 70.7
Pp3c7_7030 Physcomitrium patens HOM05D003926 ORTHO05D005273 3.2e-204 715.7 678 56.2
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 8.2e-200 701.0 385 88.8
SMO361G0392 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 2.2e-197 693.0 673 56.6
Zm00001eb308350 Zea mays HOM05D003926 ORTHO05D005273 1.0e-194 684.1 465 73.1
SMO199G0087 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 2.8e-192 676.0 662 55.9
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 8.5e-189 664.5 384 84.9
vmacro05610 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 6.1e-187 658.3 384 84.6
Atru.chr12.1304 Acer truncatum HOM05D003926 ORTHO05D005273 3.7e-184 649.0 403 80.4
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 4.8e-184 648.7 384 83.3
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 3.4e-182 642.5 385 82.6
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 1.9e-180 636.7 385 80.8
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 7.2e-180 634.8 384 81.5
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 9.4e-180 634.4 386 80.1
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 9.4e-180 634.4 386 80.1
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 2.3e-178 629.8 386 81.6
CBR_g24086 Chara braunii HOM05D003926 ORTHO05D000048 1.1e-172 610.9 728 47.7
Dinv33870 Davidia involucrata HOM05D003926 ORTHO05D005273 8.8e-162 574.7 384 76.8
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 2.9e-141 506.5 361 71.7
Peaxi162Scf00020g02342 Petunia axillaris HOM05D003926 ORTHO05D005273 2.1e-118 430.6 325 73.2
Nitab4.5_0009887g0010 Nicotiana tabacum HOM05D003926 ORTHO05D005273 5.3e-90 336.3 203 79.8
PGSC0003DMG402001381 Solanum tuberosum HOM05D003926 ORTHO05D005273 5.7e-84 316.2 275 62.5
MCO11G572 Micromonas commoda HOM05D003926 ORTHO05D005273 8.0e-46 189.5 650 27.8
Sabra11G0092200 Salix brachista HOM05D003926 ORTHO05D005273 1.2e-28 132.5 235 38.7
Hma1.2p1_0587F.1_g184120 Hydrangea macrophylla HOM05D003926 ORTHO05D005273 2.8e-14 84.7 53 73.6
ATR0564G481 Amborella trichopoda HOM05D000537 ORTHO05D000415 4.9e-11 73.9 52 61.5
Oeu047260.2 Olea europaea HOM05D003926 ORTHO05D005273 4.9e-11 73.9 43 83.7
ATR0585G095 Amborella trichopoda HOM05D003926 ORTHO05D005273 8.3e-11 73.2 53 62.3


User provided reference genes

Program Settings