Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 0.0e+00 1550.4 1038 100.0
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 0.0e+00 1219.1 1037 84.2
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 0.0e+00 1142.9 1120 59.3
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 0.0e+00 1079.3 1044 67.3
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 8.9e-297 1023.8 1056 75.6
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 6.4e-295 1017.7 1055 73.8
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.1e-289 1000.3 1051 73.5
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.4e-289 1000.0 1048 74.0
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 6.0e-285 984.6 1051 72.8
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 6.2e-282 974.5 1044 73.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.2e-279 966.1 1048 71.9
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.2e-279 966.1 1048 71.9
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 1.4e-278 963.4 1051 71.5
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 7.1e-278 961.1 1041 72.5
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.6e-277 959.9 1040 73.6
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 3.0e-276 955.7 1096 69.8
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 1.6e-274 949.9 1088 70.3
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 2.8e-274 949.1 1048 70.7
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.1e-273 947.2 1041 71.8
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 2.4e-273 946.0 1103 68.6
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 3.1e-273 945.7 1047 70.7
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 5.3e-273 944.9 1103 69.1
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.4e-272 942.2 1070 71.2
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 4.4e-272 941.8 1042 71.6
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 5.8e-272 941.4 1056 70.4
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 7.6e-272 941.0 1077 69.1
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.7e-271 939.9 1103 68.6
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 8.4e-271 937.6 1098 69.6
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 8.4e-271 937.6 1040 71.4
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 1.9e-270 936.4 1043 70.8
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 3.2e-270 935.6 1119 67.2
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 9.3e-270 934.1 1053 68.9
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 9.3e-270 934.1 1103 68.4
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 9.3e-270 934.1 1103 68.4
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 2.7e-269 932.6 1101 68.7
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 3.5e-269 932.2 1042 69.4
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 3.0e-268 929.1 1052 69.8
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 4.3e-267 925.2 1107 67.6
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 7.3e-267 924.5 1049 69.9
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 6.2e-266 921.4 1100 68.3
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 8.1e-266 921.0 1056 70.5
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 3.1e-265 919.1 1048 69.1
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 4.0e-265 918.7 1042 71.3
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.5e-264 916.8 1054 69.6
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 4.5e-264 915.2 1054 69.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 1.1e-262 910.6 1050 69.6
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 4.2e-262 908.7 1043 70.5
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 1.3e-260 903.7 1080 66.7
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 7.4e-259 897.9 1041 70.0
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.4e-257 893.6 1076 67.9
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.0e-256 889.8 1032 71.1
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 2.9e-255 885.9 1072 67.4
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 2.9e-255 885.9 1042 69.0
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.8e-255 885.6 1072 67.3
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.1e-254 884.0 1103 66.4
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.4e-254 883.6 1033 70.3
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 2.5e-254 882.9 1033 69.7
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 2.5e-254 882.9 1041 68.8
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 5.1e-252 875.2 1034 69.1
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 6.7e-252 874.8 1034 69.7
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.5e-251 872.8 1105 65.8
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 4.3e-251 872.1 1033 68.7
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.4e-251 871.3 1067 66.7
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.1e-250 869.8 1067 67.2
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 4.8e-250 868.6 1048 69.3
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 3.1e-249 865.9 1102 66.1
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 1.2e-248 864.0 1038 68.7
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 4.5e-248 862.1 1061 65.1
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 1.3e-247 860.5 1084 63.8
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 2.1e-245 853.2 1053 66.7
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 3.5e-245 852.4 1205 47.3
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 6.0e-245 851.7 1056 66.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.5e-243 847.0 1083 63.6
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.5e-243 847.0 1037 67.5
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 4.3e-243 845.5 1042 66.2
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-242 844.0 1059 64.4
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.8e-242 842.8 1059 64.0
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 3.7e-242 842.4 1053 64.3
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 8.2e-242 841.3 1044 64.8
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 4.5e-240 835.5 1062 59.8
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.0e-239 834.3 1043 66.4
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.3e-239 833.9 1054 61.3
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 1.2e-237 827.4 1062 63.7
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.6e-237 827.0 1040 66.8
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.5e-232 810.4 1038 66.9
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 3.8e-231 805.8 1064 63.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 7.4e-227 791.6 1019 64.3
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 7.0e-225 785.0 481 76.1
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 2.0e-224 783.5 919 71.6
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 4.5e-224 782.3 1053 64.7
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 5.2e-220 768.8 918 73.6
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 6.7e-220 768.5 481 74.6
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 2.2e-215 753.4 976 61.6
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 4.2e-214 749.2 967 63.7
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.7e-213 746.5 482 73.2
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 4.0e-212 742.7 482 71.6
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 8.3e-210 734.9 829 63.3
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 1.8e-209 733.8 1033 57.2
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 7.7e-208 728.4 1035 54.5
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 3.4e-203 713.0 482 70.1
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.3e-194 684.5 1031 59.8
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.7e-175 620.9 481 61.1
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 2.3e-167 594.0 918 63.0
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 4.8e-157 559.7 835 69.2
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 3.3e-142 510.4 1026 45.6
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 4.6e-136 490.0 787 68.9
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.8e-133 479.9 441 56.2
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 2.5e-129 467.6 1030 46.3
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 5.2e-103 380.2 249 68.3
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.5e-97 362.1 537 37.2
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 7.2e-89 333.2 494 42.1
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 1.6e-88 332.0 700 57.7
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 2.6e-86 324.7 205 73.7
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.4e-84 318.9 340 57.1
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 3.8e-82 310.8 334 55.4
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 4.3e-81 307.4 198 71.2
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 5.8e-70 270.4 454 35.9
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.5e-65 255.8 337 48.7
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-61 242.3 165 70.3
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 4.1e-60 237.7 493 34.9
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.1e-58 230.7 310 49.0
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 5.4e-52 210.7 265 46.0
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 3.1e-47 194.9 160 63.8
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 1.6e-43 182.6 99 82.8
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 1.4e-39 169.5 131 57.3
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 6.4e-37 160.6 126 63.5
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.1e-36 159.8 126 63.5
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-33 149.8 89 80.9
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 1.1e-33 149.8 122 66.4
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.6e-33 146.7 112 67.0
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 3.1e-31 141.7 181 45.3
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 6.9e-31 140.6 89 75.3
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.8e-26 125.9 89 68.5
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 2.3e-26 125.6 82 73.2
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-23 116.7 85 62.4
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.8e-23 115.9 186 40.9
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 4.0e-23 114.8 139 47.5
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-22 113.2 105 58.1
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.6e-14 85.5 119 41.2
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 4.2e-12 78.2 328 25.9
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.9e-10 71.6 43 79.1
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.8e-08 64.7 40 75.0
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 1.4e-07 63.2 49 49.0
HanXRQChr06g0176501 Helianthus annuus HOM05D004966 ORTHO05D006199 2.0e-06 59.3 36 75.0


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