Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 2.1e-85 318.9 158 100.0
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 9.3e-81 303.5 158 94.3
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.5e-78 296.2 158 91.1
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 6.9e-76 287.3 158 87.3
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 9.0e-76 287.0 158 89.2
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 3.6e-72 275.0 158 83.5
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 7.9e-72 273.9 158 84.8
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.0e-71 273.5 158 83.5
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 5.1e-71 271.2 158 84.2
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 5.1e-71 271.2 158 82.9
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.5e-70 269.6 158 83.5
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 2.0e-70 269.2 158 84.8
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 4.3e-70 268.1 158 83.5
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 4.3e-70 268.1 158 82.9
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.2e-69 265.8 158 82.3
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 3.7e-69 265.0 158 82.3
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 3.7e-69 265.0 158 82.9
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 6.3e-69 264.2 158 82.3
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 6.3e-69 264.2 158 81.0
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.1e-68 263.5 156 81.4
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 1.8e-68 262.7 158 82.9
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 1.8e-68 262.7 158 81.0
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 2.4e-68 262.3 158 80.4
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 2.4e-68 262.3 158 80.4
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 6.9e-68 260.8 158 80.4
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 9.1e-68 260.4 158 80.4
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.2e-67 260.0 158 81.0
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.2e-67 260.0 158 81.6
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 1.2e-67 260.0 158 81.6
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 1.2e-67 260.0 158 80.4
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 1.5e-67 259.6 158 81.0
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 2.0e-67 259.2 158 81.0
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 2.6e-67 258.8 158 80.4
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 2.6e-67 258.8 158 81.0
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 2.6e-67 258.8 158 79.7
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 3.4e-67 258.5 163 80.4
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 4.5e-67 258.1 158 80.4
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 4.5e-67 258.1 158 81.0
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 4.5e-67 258.1 162 79.6
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 5.9e-67 257.7 158 80.4
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 1.0e-66 256.9 158 80.4
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.0e-66 256.9 158 78.5
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.3e-66 256.5 158 78.5
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 1.3e-66 256.5 158 78.5
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.3e-66 256.5 156 80.1
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.7e-66 256.1 158 80.4
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 3.8e-66 255.0 158 80.4
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 3.8e-66 255.0 158 79.1
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 5.0e-66 254.6 153 81.7
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 6.5e-66 254.2 158 80.4
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 2.5e-65 252.3 158 79.1
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 4.2e-65 251.5 158 76.6
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.2e-64 250.0 158 77.2
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 2.1e-64 249.2 158 76.6
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 3.6e-64 248.4 157 75.8
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 4.7e-64 248.1 156 79.5
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 6.1e-64 247.7 158 79.1
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 7.9e-64 247.3 158 77.2
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 7.9e-64 247.3 158 79.1
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 7.9e-64 247.3 158 79.1
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 1.4e-63 246.5 158 75.9
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 2.3e-63 245.7 158 78.5
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 3.0e-63 245.4 158 78.5
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 3.0e-63 245.4 158 77.8
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 3.9e-63 245.0 158 77.8
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.1e-62 243.4 158 77.8
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 2.0e-62 242.7 158 77.2
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 2.0e-62 242.7 159 78.6
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 2.0e-62 242.7 148 79.7
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.6e-62 242.3 158 77.2
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 3.3e-62 241.9 148 81.1
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 5.7e-62 241.1 159 78.0
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 5.7e-62 241.1 158 77.2
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 9.7e-62 240.4 158 76.6
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 7.0e-60 234.2 156 75.0
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 9.1e-60 233.8 148 77.7
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 1.2e-59 233.4 158 72.8
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.6e-59 233.0 158 74.1
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 3.5e-59 231.9 143 79.0
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 2.2e-58 229.2 158 72.2
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 3.8e-58 228.4 159 71.1
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.2e-57 225.3 217 58.1
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.1e-54 216.9 156 70.5
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 2.6e-54 215.7 158 69.0
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 1.3e-53 213.4 158 70.3
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 2.8e-53 212.2 158 70.9
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 4.8e-53 211.5 148 73.0
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 6.3e-53 211.1 199 55.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.4e-52 209.9 157 67.5
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 1.6e-51 206.5 276 45.7
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 2.0e-51 206.1 158 67.1
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 5.9e-51 204.5 148 70.9
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 1.7e-50 203.0 300 43.0
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.7e-50 203.0 228 51.8
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 8.5e-50 200.7 114 84.2
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 5.5e-49 198.0 154 61.7
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 6.1e-48 194.5 111 85.6
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 5.7e-46 188.0 156 60.3
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 5.7e-46 188.0 155 63.2
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 3.7e-45 185.3 158 58.2
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 6.3e-45 184.5 155 58.7
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.3e-42 176.8 111 76.6
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 4.7e-40 168.3 99 79.8
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 5.2e-39 164.9 156 57.7
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.5e-38 163.3 158 57.6
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 5.7e-38 161.4 99 78.8
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.2e-37 159.5 159 53.5
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.4e-36 156.0 221 43.9
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.3e-34 150.2 111 70.3
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 4.3e-33 145.2 111 63.1
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 2.1e-32 142.9 162 48.8
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 3.6e-32 142.1 78 85.9
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 9.8e-30 134.0 91 73.6
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 1.8e-23 113.2 77 67.5
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.4e-20 103.6 168 39.9
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.5e-14 83.6 57 68.4
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 7.5e-14 81.3 153 29.4
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 4.1e-12 75.5 155 29.0
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 5.4e-12 75.1 46 78.3
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 7.3e-09 64.7 37 78.4
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 2.8e-08 62.8 37 78.4
unitig_748.g8492 Utricularia gibba HOM05D005540 ORTHO05D425961 1.8e-07 60.1 116 37.9


User provided reference genes

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