Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 7.4e-58 227.3 138 100.0
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 4.4e-42 174.9 141 80.9
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.0e-39 166.0 134 78.4
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.0e-39 166.0 134 78.4
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.0e-39 166.0 134 78.4
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 1.9e-37 159.5 138 75.4
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 2.5e-37 159.1 130 78.5
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 1.4e-35 153.3 135 51.1
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 6.8e-35 151.0 133 70.7
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 1.2e-34 150.2 135 71.1
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 1.5e-34 149.8 130 75.4
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 3.4e-34 148.7 131 74.0
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 1.3e-33 146.7 134 69.4
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.7e-33 146.4 133 69.9
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 2.8e-33 145.6 134 68.7
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 2.8e-33 145.6 136 69.9
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 2.8e-33 145.6 133 72.2
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 2.8e-33 145.6 133 72.2
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 3.7e-33 145.2 134 61.9
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 4.9e-33 144.8 132 70.5
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 4.9e-33 144.8 138 68.1
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 4.9e-33 144.8 131 68.7
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 4.9e-33 144.8 134 66.4
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 4.9e-33 144.8 131 70.2
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 6.3e-33 144.4 130 70.8
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 6.3e-33 144.4 133 72.2
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 1.1e-32 143.7 134 66.4
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.1e-32 143.7 132 69.7
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 1.4e-32 143.3 133 70.7
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 1.4e-32 143.3 132 69.7
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 3.1e-32 142.1 134 67.2
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 4.1e-32 141.7 132 68.9
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 1.2e-31 140.2 133 68.4
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 1.2e-31 140.2 138 66.7
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 1.2e-31 140.2 132 68.9
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 2.0e-31 139.4 131 58.8
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 2.0e-31 139.4 138 65.2
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 2.7e-31 139.0 133 68.4
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 2.7e-31 139.0 138 65.9
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 3.5e-31 138.7 130 56.2
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 5.9e-31 137.9 131 64.9
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 1.7e-30 136.3 136 65.4
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 2.3e-30 136.0 138 65.2
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 2.3e-30 136.0 133 66.9
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 2.9e-30 135.6 131 69.5
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 3.8e-30 135.2 138 65.9
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 1.1e-29 133.7 134 67.9
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 1.1e-29 133.7 130 65.4
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 1.1e-29 133.7 132 65.2
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 1.9e-29 132.9 133 66.9
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 2.5e-29 132.5 129 65.9
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 3.3e-29 132.1 130 65.4
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 4.2e-29 131.7 128 58.6
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 4.2e-29 131.7 138 63.0
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 4.2e-29 131.7 139 63.3
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 4.2e-29 131.7 141 63.8
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 5.5e-29 131.3 128 69.5
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 7.2e-29 131.0 136 62.5
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 9.5e-29 130.6 130 70.0
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 2.8e-28 129.0 129 65.9
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 4.7e-28 128.3 83 67.5
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 6.1e-28 127.9 139 60.4
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 1.8e-27 126.3 130 63.8
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 2.3e-27 125.9 140 62.9
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 4.0e-27 125.2 131 63.4
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 5.2e-27 124.8 139 59.0
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 8.9e-27 124.0 128 68.8
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 8.9e-27 124.0 128 46.1
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 1.2e-26 123.6 139 59.7
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 1.2e-26 123.6 131 61.1
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 2.0e-26 122.9 122 70.5
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 2.0e-26 122.9 127 65.4
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 2.6e-26 122.5 129 65.1
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 4.4e-26 121.7 85 64.7
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 4.4e-26 121.7 118 69.5
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 5.7e-26 121.3 139 57.6
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 1.3e-25 120.2 89 59.6
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 2.2e-25 119.4 135 54.8
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 8.3e-25 117.5 130 56.2
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 1.4e-24 116.7 121 66.9
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 1.8e-24 116.3 136 57.4
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 4.1e-24 115.2 132 58.3
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 5.4e-24 114.8 136 56.6
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 5.4e-24 114.8 136 56.6
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 1.2e-23 113.6 80 58.8
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 1.2e-23 113.6 131 58.8
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 1.2e-23 113.6 136 56.6
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 2.7e-23 112.5 120 65.8
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 3.5e-23 112.1 136 55.9
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 1.0e-22 110.5 142 40.1
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 8.6e-22 107.5 139 40.3
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 4.3e-21 105.1 133 56.4
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 5.6e-21 104.8 133 57.9
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 7.3e-21 104.4 116 62.9
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 7.3e-21 104.4 131 57.3
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 9.5e-21 104.0 135 54.1
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 1.2e-20 103.6 128 56.2
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 1.6e-20 103.2 128 55.5
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 2.1e-20 102.8 128 55.5
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 2.8e-20 102.4 128 57.0
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 1.0e-19 100.5 109 45.9
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 6.8e-19 97.8 113 58.4
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 2.0e-18 96.3 121 54.5
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 3.4e-18 95.5 82 43.9
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 4.4e-18 95.1 128 54.7
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 4.4e-18 95.1 128 54.7
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 5.8e-18 94.7 132 52.3
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 7.5e-18 94.4 138 42.0
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 1.3e-17 93.6 95 66.3
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 2.2e-17 92.8 139 51.1
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 4.9e-17 91.7 131 58.0
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 1.1e-16 90.5 117 57.3
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 1.4e-16 90.1 98 72.4
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 9.2e-16 87.4 116 50.0
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 1.0e-14 84.0 118 36.4
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 1.0e-14 84.0 118 36.4
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 1.0e-14 84.0 118 36.4
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 3.9e-14 82.0 122 35.2
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 6.6e-14 81.3 118 34.7
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 6.6e-14 81.3 118 34.7
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 3.3e-13 79.0 122 34.4
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 7.3e-13 77.8 125 48.8
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 8.9e-11 70.9 62 50.0
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 5.8e-10 68.2 124 48.4
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 9.8e-10 67.4 73 42.5
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 1.7e-09 66.6 142 30.3
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.7e-09 66.6 94 52.1
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.1e-08 63.9 58 50.0
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.4e-08 63.5 102 32.4
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 3.5e-07 58.9 130 42.3
Hma1.2p1_1820F.1_g304180 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 6.0e-07 58.2 71 77.5


User provided reference genes

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