Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 2.6e-279 965.3 724 100.0
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 2.0e-162 577.0 775 72.6
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.1e-149 534.6 692 73.6
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 3.6e-143 513.1 752 62.6
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 2.4e-139 500.4 451 59.6
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 6.9e-139 498.8 701 61.2
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 7.7e-138 495.4 767 67.3
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 2.1e-135 487.3 629 76.0
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 2.1e-135 487.3 761 56.9
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 7.9e-135 485.3 677 61.6
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.0e-134 485.0 664 71.1
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 3.0e-134 483.4 662 66.2
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 9.7e-133 478.4 734 65.3
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.6e-130 471.1 672 72.2
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.0e-129 468.4 671 71.1
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.2e-126 456.1 365 74.8
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.1e-125 454.9 458 62.7
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.5e-125 454.5 745 66.0
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.5e-125 454.5 371 73.6
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.5e-125 454.5 428 65.4
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 3.3e-125 453.4 451 54.3
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.8e-124 450.3 467 62.7
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.4e-123 448.0 415 65.3
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 1.8e-123 447.6 674 69.9
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 2.4e-123 447.2 672 71.6
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 7.0e-123 445.7 473 60.3
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 7.0e-123 445.7 740 65.8
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 9.1e-123 445.3 536 55.2
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.2e-122 444.9 740 63.6
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.0e-122 444.1 536 55.0
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 3.5e-122 443.4 740 65.7
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 7.7e-122 442.2 593 75.4
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.3e-121 441.4 659 68.0
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.3e-121 441.4 371 71.4
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.3e-121 441.4 685 64.1
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.7e-121 441.0 740 64.5
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 5.0e-121 439.5 434 63.8
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.1e-120 438.3 557 80.6
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.9e-120 437.6 685 63.6
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 2.5e-120 437.2 651 67.6
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 3.2e-120 436.8 452 61.1
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 4.2e-120 436.4 595 77.3
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 1.2e-119 434.9 435 63.0
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.2e-119 434.9 674 64.5
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 4.7e-119 433.0 431 63.8
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 1.0e-118 431.8 434 62.4
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 4.0e-118 429.9 666 70.4
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 6.8e-118 429.1 491 57.4
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 1.2e-117 428.3 449 61.0
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.6e-117 427.2 444 59.0
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 4.4e-117 426.4 663 67.3
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 4.4e-117 426.4 663 67.3
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 9.8e-117 425.2 634 70.7
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 1.3e-116 424.9 719 65.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 6.3e-116 422.5 744 65.2
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.4e-115 421.4 639 48.5
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.4e-115 421.4 639 48.5
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.4e-115 421.4 698 67.0
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.8e-115 421.0 652 65.3
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 7.0e-115 419.1 435 61.4
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.6e-114 417.9 449 58.8
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.6e-114 417.9 430 60.0
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.0e-114 417.5 360 69.4
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 2.0e-114 417.5 388 66.8
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 2.7e-114 417.2 478 52.5
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 4.5e-114 416.4 407 62.7
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 4.5e-114 416.4 627 70.0
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 5.9e-114 416.0 696 66.5
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.0e-113 415.2 419 63.0
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 1.3e-113 414.8 598 73.9
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 5.0e-113 412.9 419 63.2
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 6.5e-113 412.5 459 58.2
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.9e-112 411.0 419 62.5
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 7.2e-112 409.1 430 60.9
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.6e-111 407.9 700 64.9
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 1.4e-110 404.8 335 73.1
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 1.4e-110 404.8 649 64.1
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 3.0e-110 403.7 453 57.6
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 1.5e-109 401.4 424 59.7
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 3.4e-109 400.2 345 70.7
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 4.4e-109 399.8 591 73.3
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 5.7e-109 399.4 569 75.9
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 1.7e-108 397.9 679 65.2
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 2.2e-108 397.5 425 54.1
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 4.9e-108 396.4 544 78.5
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 3.1e-107 393.7 414 53.6
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.5e-106 390.2 448 56.0
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 4.5e-106 389.8 600 66.2
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 2.9e-105 387.1 433 57.7
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.5e-104 384.8 437 56.3
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 1.5e-104 384.8 362 61.9
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 3.6e-103 380.2 408 59.8
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 8.9e-102 375.6 462 54.8
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 3.4e-101 373.6 361 64.0
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 3.4e-101 373.6 361 64.0
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 3.7e-100 370.2 361 63.7
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 3.2e-99 367.1 361 63.7
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 2.0e-98 364.4 381 58.3
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 5.9e-98 362.8 361 63.2
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.8e-94 351.3 450 53.8
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.6e-93 347.4 445 54.2
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 2.4e-75 287.7 380 44.2
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 3.9e-73 280.4 534 44.9
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 9.6e-72 275.8 208 63.0
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.5e-64 251.1 223 60.1
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 8.4e-52 209.5 299 43.1
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.0e-44 186.0 395 40.8
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 5.5e-43 180.3 373 36.2
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 7.9e-34 149.8 459 36.2
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 2.8e-23 114.8 144 45.8
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 9.1e-22 109.8 173 34.1
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 3.4e-21 107.8 104 49.0
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.8e-20 104.4 62 74.2
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.1e-14 86.3 58 72.4


User provided reference genes

Program Settings