Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01204 Erythranthe guttata HOM05D013428 ORTHO05D017908 8.0e-95 351.3 324 100.0
Migut.G00831 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.4e-19 101.3 100 58.0
SalBow1G4634 Salvia bowleyana HOM05D042251 ORTHO05D002854 1.4e-11 74.7 166 33.7
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 3.2e-11 73.6 106 36.8
Migut.G01182 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.5e-11 72.8 89 51.7
Nitab4.5_0000556g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.2e-11 72.4 105 41.0
SGA_v2.0_scaffold52G19095 Striga asiatica HOM05D000162 ORTHO05D000090 9.4e-11 72.0 198 29.8
Gorai.011G155700 Gossypium raimondii HOM05D013428 ORTHO05D015803 4.7e-10 69.7 81 40.7
Migut.G01062 Erythranthe guttata HOM05D040971 ORTHO05D003288 1.8e-09 67.8 36 88.9
HanXRQChr14g0435491 Helianthus annuus HOM05D000162 ORTHO05D000090 1.8e-09 67.8 90 43.3
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 6.7e-09 65.9 123 33.3
ECA240G4052 Erigeron canadensis HOM05D000162 ORTHO05D000090 8.8e-09 65.5 124 32.3
Migut.G01206 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.0e-08 64.3 35 91.4
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 3.3e-08 63.5 124 32.3
ECA240G1752 Erigeron canadensis HOM05D000162 ORTHO05D000090 5.7e-08 62.8 142 38.0
SalBow1G3324 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.7e-08 62.8 64 48.4
Nitab4.5_0001998g0170 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.3e-07 61.6 81 43.2
vmacro13799 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.3e-07 61.6 104 31.7
Nn8g40410 Nelumbo nucifera HOM05D003056 ORTHO05D003422 2.2e-07 60.8 114 29.8
CDE02G3715 Ceratophyllum demersum HOM05D002444 ORTHO05D009235 2.8e-07 60.5 85 35.3
Hma1.2p1_0712F.1_g207600 Hydrangea macrophylla HOM05D000001 ORTHO05D000003 2.8e-07 60.5 113 32.7
Sc18g0004860 Simmondsia chinensis HOM05D007083 ORTHO05D008801 2.8e-07 60.5 183 26.8
BcaC04g22583 Brassica carinata HOM05D000162 ORTHO05D024264 3.7e-07 60.1 104 33.7
AUR62006654 Chenopodium quinoa HOM05D002099 ORTHO05D002080 4.8e-07 59.7 84 41.7
ECA240G0231 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.8e-07 59.7 103 37.9
Migut.G01065 Erythranthe guttata HOM05D029473 ORTHO05D017908 4.8e-07 59.7 119 37.8
Migut.G01107 Erythranthe guttata HOM05D007212 ORTHO05D009094 4.8e-07 59.7 176 27.8
FAN07G1351 Fragaria x ananassa HOM05D003056 ORTHO05D003422 4.8e-07 59.7 118 28.8
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 4.8e-07 59.7 89 31.5
AT2G18940 Arabidopsis thaliana HOM05D003056 ORTHO05D003422 8.2e-07 58.9 118 30.5
FvH4_4g07880 Fragaria vesca HOM05D003056 ORTHO05D003422 8.2e-07 58.9 118 28.0
MD13G1249100 Malus domestica HOM05D003056 ORTHO05D003422 8.2e-07 58.9 118 28.0
MD16G1255600 Malus domestica HOM05D003056 ORTHO05D003422 8.2e-07 58.9 97 32.0
Phvul.009G215700 Phaseolus vulgaris HOM05D007173 ORTHO05D009151 8.2e-07 58.9 196 25.0
Atru.chr7.865 Acer truncatum HOM05D003056 ORTHO05D003422 1.1e-06 58.5 139 28.1
AUR62038376 Chenopodium quinoa HOM05D000001 ORTHO05D000003 1.4e-06 58.2 189 25.4
FAN17G0903 Fragaria x ananassa HOM05D003056 ORTHO05D003422 1.4e-06 58.2 97 30.9
Nitab4.5_0001998g0100 Nicotiana tabacum HOM05D001400 ORTHO05D016930 1.4e-06 58.2 100 31.0
Os10g0497366 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 1.4e-06 58.2 89 39.3
Prupe.3G037500 Prunus persica HOM05D003056 ORTHO05D003422 1.4e-06 58.2 118 28.8
VMungo1215G1169 Vigna mungo HOM05D007173 ORTHO05D009151 1.4e-06 58.2 196 25.0
EL10Ac4g09528 Beta vulgaris HOM05D000162 ORTHO05D000090 1.8e-06 57.8 88 36.4
Ciclev10007460m.g Citrus clementina HOM05D003056 ORTHO05D003422 1.8e-06 57.8 116 28.4
Lsat_1_v5_gn_3_115200 Lactuca sativa HOM05D000162 ORTHO05D000090 1.8e-06 57.8 99 34.3
SalBow1G4761 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.8e-06 57.8 123 34.1
FAN12G3026 Fragaria x ananassa HOM05D003056 ORTHO05D003422 2.4e-06 57.4 118 28.0
Gohir.A04G034650 Gossypium hirsutum HOM05D000162 ORTHO05D000090 2.4e-06 57.4 80 42.5
Medtr3g061020 Medicago truncatula HOM05D008100 ORTHO05D011797 2.4e-06 57.4 108 30.6
AL3G52990 Arabidopsis lyrata HOM05D003056 ORTHO05D003422 3.1e-06 57.0 118 29.7
arahy.Tifrunner.gnm1.ann1.3K1SXW Arachis hypogaea HOM05D000162 ORTHO05D000090 3.1e-06 57.0 117 30.8
arahy.Tifrunner.gnm1.ann1.U8UX16 Arachis hypogaea HOM05D000239 ORTHO05D009715 3.1e-06 57.0 77 35.1
Peaxi162Scf01035g00011 Petunia axillaris HOM05D000001 ORTHO05D000003 3.1e-06 57.0 132 33.3
Sabra06G0127800 Salix brachista HOM05D003056 ORTHO05D003422 3.1e-06 57.0 137 26.3
Manes.06G022500 Manihot esculenta HOM05D003056 ORTHO05D003422 4.1e-06 56.6 117 29.1
Thhalv10010184m.g Eutrema salsugineum HOM05D007409 ORTHO05D009264 5.3e-06 56.2 170 28.2
PGR044G2513 Punica granatum HOM05D000001 ORTHO05D000003 5.3e-06 56.2 109 32.1
RcHm_v2.0_Chr4g0401161 Rosa chinensis HOM05D003056 ORTHO05D003422 5.3e-06 56.2 97 30.9
SalBow3G4453 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.3e-06 56.2 75 46.7
THA.LOC104805220 Tarenaya hassleriana HOM05D007623 ORTHO05D009641 5.3e-06 56.2 95 30.5
MSTRG.6545 Avicennia marina HOM05D000001 ORTHO05D000003 7.0e-06 55.8 135 31.1
Migut.G01195 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.0e-06 55.8 126 33.3
Glyma.16G206600 Glycine max HOM05D000162 ORTHO05D000090 7.0e-06 55.8 90 38.9
Cfa013401 Carpinus fangiana HOM05D003056 ORTHO05D003422 9.1e-06 55.5 117 29.1
Gohir.A04G029900 Gossypium hirsutum HOM05D013058 ORTHO05D003288 9.1e-06 55.5 95 32.6
Medtr1g035250 Medicago truncatula HOM05D007409 ORTHO05D009264 9.1e-06 55.5 62 37.1
Peaxi162Scf00154g00319 Petunia axillaris HOM05D000162 ORTHO05D000090 9.1e-06 55.5 102 33.3
QL02p098354 Quercus lobata HOM05D003056 ORTHO05D003422 9.1e-06 55.5 97 29.9
Rhsim04G0146100 Rhododendron simsii HOM05D009581 ORTHO05D004107 9.1e-06 55.5 102 36.3
VMungo0464G0716 Vigna mungo HOM05D003056 ORTHO05D003422 9.1e-06 55.5 137 27.0


User provided reference genes

Program Settings