Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01116 Erythranthe guttata HOM05D006976 ORTHO05D008761 2.3e-60 235.3 116 100.0
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 2.2e-31 139.0 98 74.5
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 7.2e-30 134.0 101 70.3
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 3.6e-29 131.7 98 70.4
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 1.0e-28 130.2 115 61.7
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 2.3e-28 129.0 101 65.3
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 3.9e-28 128.3 109 64.2
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 3.9e-28 128.3 91 72.5
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 3.9e-28 128.3 109 64.2
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 5.2e-28 127.9 109 63.3
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 8.8e-28 127.1 108 64.8
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 1.1e-27 126.7 81 79.0
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 2.0e-27 125.9 107 62.6
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 2.6e-27 125.6 90 72.2
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 5.7e-27 124.4 90 71.1
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 1.3e-26 123.2 108 58.3
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 1.7e-26 122.9 97 67.0
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 3.7e-26 121.7 98 62.2
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 4.8e-26 121.3 91 68.1
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 4.8e-26 121.3 115 58.3
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 6.3e-26 120.9 115 56.5
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 6.3e-26 120.9 81 74.1
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.4e-25 119.8 104 63.5
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 2.4e-25 119.0 115 57.4
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 2.4e-25 119.0 108 58.3
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.1e-25 118.6 99 62.6
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 3.1e-25 118.6 99 62.6
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.1e-25 118.6 99 62.6
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 4.1e-25 118.2 87 72.4
Lalb_Chr18g0049641 Lupinus albus HOM05D006976 ORTHO05D008761 5.3e-25 117.9 92 64.1
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 7.0e-25 117.5 115 56.5
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 7.0e-25 117.5 99 62.6
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 7.0e-25 117.5 97 64.9
Nn010s41442 Nelumbo nucifera HOM05D006976 ORTHO05D008761 2.6e-24 115.5 74 75.7
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 3.5e-24 115.2 91 64.8
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 5.9e-24 114.4 115 53.9
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 7.7e-24 114.0 89 64.0
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 1.7e-23 112.8 115 53.0
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 2.2e-23 112.5 115 53.0
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 2.2e-23 112.5 115 53.0
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 2.9e-23 112.1 91 62.6
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 2.9e-23 112.1 97 58.8
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 5.0e-23 111.3 82 70.7
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 5.0e-23 111.3 82 70.7
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 1.1e-22 110.2 81 67.9
BolSC46t61001H Brassica oleracea HOM05D006976 ORTHO05D008761 4.2e-22 108.2 74 71.6
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 7.2e-22 107.5 101 55.4
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 2.1e-21 105.9 90 64.4
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 6.1e-21 104.4 106 53.8
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 1.8e-20 102.8 118 48.3
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 4.0e-20 101.7 90 58.9
TPR.G11768 Trifolium pratense HOM05D006976 ORTHO05D008761 5.2e-20 101.3 95 55.8
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 1.2e-19 100.1 98 56.1
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.3e-18 96.7 73 67.1
arahy.Tifrunner.gnm1.ann1.Z0Q6DR Arachis hypogaea HOM05D006976 ORTHO05D008761 3.7e-18 95.1 76 63.2
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 4.1e-17 91.7 71 66.2
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 7.0e-17 90.9 94 54.3
Medtr3g111320 Medicago truncatula HOM05D006976 ORTHO05D008761 2.0e-16 89.4 71 60.6
TPR.G15439 Trifolium pratense HOM05D006976 ORTHO05D008761 5.9e-16 87.8 66 65.2
Gorai.007G243600 Gossypium raimondii HOM05D000806 ORTHO05D002324 1.0e-15 87.0 51 80.4
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 2.5e-14 82.4 71 62.0
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 5.5e-14 81.3 76 59.2
Hund10572 Selenicereus undatus HOM05D006976 ORTHO05D008761 9.4e-14 80.5 87 49.4
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 9.4e-14 80.5 86 48.8
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 1.6e-13 79.7 81 53.1
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 3.6e-13 78.6 66 56.1
BNapus_Darmor_BZH_scaffold_253p00220 Brassica napus HOM05D000806 ORTHO05D002324 4.0e-12 75.1 53 69.8
Glyma.07G028150 Glycine max HOM05D006976 ORTHO05D008761 5.2e-12 74.7 62 59.7
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 1.2e-11 73.6 72 54.2
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 2.0e-11 72.8 70 54.3
Lalb_Chr03g0039211 Lupinus albus HOM05D006976 ORTHO05D008761 5.7e-11 71.2 46 76.1
BraSC103t45467Z Brassica rapa HOM05D006976 ORTHO05D008761 7.5e-11 70.9 54 68.5
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 6.3e-10 67.8 77 50.6
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 1.4e-09 66.6 77 50.6
HanXRQChr02g0041581 Helianthus annuus HOM05D000806 ORTHO05D002324 1.8e-09 66.2 50 66.0
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 3.1e-09 65.5 53 62.3
QL93p0999_0001 Quercus lobata HOM05D006976 ORTHO05D008761 3.1e-09 65.5 91 45.1
Nitab4.5_0010235g0040 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.7e-07 59.7 42 69.0
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 5.5e-06 54.7 44 59.1
Migut.D01165 Erythranthe guttata HOM05D006976 ORTHO05D008761 5.5e-06 54.7 44 63.6


User provided reference genes

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