Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1299.6 665 100.0
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1178.3 678 92.2
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1107.8 686 85.4
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 6.7e-213 744.6 672 60.9
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.4e-194 683.7 681 56.5
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 5.7e-188 661.8 644 54.0
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 9.1e-186 654.4 642 55.0
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 3.5e-185 652.5 681 51.5
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 7.7e-185 651.4 697 50.5
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 8.0e-182 641.3 621 55.9
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.4e-181 640.6 667 53.2
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 3.1e-178 629.4 651 52.1
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 7.0e-178 628.2 641 53.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.6e-177 627.1 653 53.4
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 4.5e-177 625.5 644 52.5
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 2.2e-176 623.2 644 52.2
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 2.9e-176 622.9 664 52.0
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 8.5e-176 621.3 647 52.2
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 8.5e-176 621.3 641 52.0
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.1e-174 616.7 645 52.1
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 3.6e-174 615.9 646 50.8
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 4.7e-174 615.5 641 50.9
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 6.1e-174 615.1 685 48.6
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 6.1e-174 615.1 640 50.3
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.8e-173 613.6 650 50.6
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 8.8e-173 611.3 648 50.2
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 4.4e-172 609.0 658 51.1
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.7e-171 607.1 643 50.4
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 2.2e-171 606.7 672 49.0
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 2.2e-171 606.7 645 49.6
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.4e-170 604.0 662 51.1
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 2.4e-170 603.2 633 52.3
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 7.0e-170 601.7 641 50.9
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 9.1e-170 601.3 644 50.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 9.1e-170 601.3 661 49.6
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 3.5e-169 599.4 648 49.7
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 5.9e-169 598.6 664 49.5
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 7.7e-169 598.2 640 50.0
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.2e-168 596.7 645 50.2
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.2e-168 596.7 651 49.5
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 6.5e-168 595.1 649 49.5
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 7.2e-167 591.7 650 49.7
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 9.4e-167 591.3 622 52.6
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 9.4e-167 591.3 635 50.2
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 3.6e-166 589.3 624 50.5
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.4e-165 587.4 629 50.7
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.4e-165 587.4 625 50.6
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.4e-165 587.4 625 50.6
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.4e-165 587.4 650 49.8
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 8.8e-165 584.7 648 49.7
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.2e-164 584.3 549 54.8
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.2e-164 584.3 628 49.8
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 1.2e-164 584.3 635 49.6
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.5e-164 583.9 677 48.6
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.5e-164 583.9 646 47.4
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.0e-164 583.6 677 48.6
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 2.6e-164 583.2 628 50.3
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 4.4e-164 582.4 658 48.2
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 9.8e-164 581.3 676 47.3
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-163 580.9 677 48.4
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.8e-163 579.7 640 49.5
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 6.3e-163 578.6 623 49.3
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 8.3e-163 578.2 647 49.3
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.4e-162 577.4 660 48.5
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 2.4e-162 576.6 666 50.6
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 3.1e-162 576.2 669 47.1
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 9.1e-162 574.7 667 48.0
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.2e-161 574.3 618 51.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.0e-161 573.5 678 48.7
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.0e-160 571.2 649 49.0
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.3e-160 570.9 646 48.5
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 3.8e-160 569.3 646 47.5
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 6.1e-158 562.0 682 45.7
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.4e-157 560.8 640 49.5
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 5.2e-157 558.9 644 48.8
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 1.2e-145 521.2 638 46.7
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 3.5e-145 519.6 484 55.4
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 3.6e-142 509.6 662 44.1
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.8e-141 507.3 619 47.8
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 9.8e-140 501.5 493 56.4
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.6e-134 484.2 703 44.0
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 4.7e-134 482.6 527 49.7
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 4.0e-133 479.6 421 57.5
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 8.9e-133 478.4 422 56.9
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 4.4e-132 476.1 639 45.1
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.1e-129 467.2 655 42.3
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.2e-123 447.2 591 43.7
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.7e-121 440.3 380 57.6
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.0e-120 438.3 529 47.1
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.4e-117 427.9 588 42.9
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 2.2e-115 420.6 346 61.8
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 6.0e-113 412.5 506 47.0
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 9.9e-108 395.2 314 62.1
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 8.1e-102 375.6 641 37.0
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.1e-95 355.1 308 56.5
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.6e-94 351.3 293 57.7
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 9.0e-93 345.5 269 63.2
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.0e-91 342.0 700 34.4
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 4.3e-87 326.6 269 60.2
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 3.4e-84 317.0 391 47.8
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 3.0e-80 303.9 619 34.1
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.1e-71 275.4 374 44.4
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 6.5e-67 259.6 375 42.7
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.7e-62 243.8 598 31.3
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 1.3e-59 235.3 544 30.3
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 2.5e-58 231.1 327 41.3
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 5.9e-52 209.9 219 53.0
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.2e-51 208.0 311 43.1
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 5.2e-48 196.8 401 34.9
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 8.6e-43 179.5 140 57.9
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.5e-39 168.7 116 73.3
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.2e-38 164.9 331 33.5
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-37 161.0 248 39.5
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 9.5e-34 149.4 112 62.5
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 5.2e-32 143.7 120 57.5
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.4e-29 135.6 197 39.6
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.9e-29 135.2 260 37.3
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.1e-26 125.9 144 42.4
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 4.3e-26 124.0 150 47.3
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 6.6e-19 100.1 144 43.8
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 4.3e-18 97.4 77 64.9
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 3.1e-16 91.3 118 42.4
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 5.8e-15 87.0 52 73.1
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.3e-14 85.9 80 55.0
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 2.1e-12 78.6 211 27.5
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 7.8e-12 76.6 278 24.8
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 2.5e-10 71.6 279 26.2
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 6.2e-09 67.0 67 43.3
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 3.1e-08 64.7 143 29.4


User provided reference genes

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