Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 9.4e-245 849.7 424 100.0
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 5.3e-240 833.9 422 98.3
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.2e-234 816.2 422 96.7
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 8.4e-153 544.3 419 66.8
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 2.1e-135 486.5 422 59.0
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 4.2e-112 409.1 430 52.8
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 5.5e-112 408.7 425 52.5
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 2.2e-108 396.7 442 48.4
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 4.8e-108 395.6 429 51.3
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 5.0e-105 385.6 424 50.0
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 4.2e-104 382.5 400 52.0
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 4.7e-103 379.0 413 51.1
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 6.1e-103 378.6 425 47.5
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.4e-102 377.5 426 48.8
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.2e-101 374.4 419 48.9
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.1e-99 367.9 422 48.3
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.1e-99 367.9 424 46.5
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 1.1e-99 367.9 409 49.9
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 2.4e-99 366.7 415 48.0
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.4e-99 366.7 426 49.5
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 4.1e-99 365.9 420 47.6
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.2e-98 364.4 409 49.9
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.6e-98 364.0 384 52.1
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 2.0e-98 363.6 424 46.5
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.5e-98 362.8 421 47.3
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.0e-97 361.3 438 47.7
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.0e-97 361.3 416 48.8
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 1.0e-97 361.3 423 44.9
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 1.3e-97 360.9 425 45.9
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.3e-97 360.9 422 45.5
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 2.3e-97 360.1 416 48.1
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 3.8e-97 359.4 503 43.3
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 8.6e-97 358.2 401 49.6
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.1e-96 357.8 424 45.5
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 2.5e-96 356.7 425 47.1
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.5e-96 356.7 416 47.1
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 3.3e-96 356.3 414 48.8
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 3.3e-96 356.3 420 47.4
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 1.6e-95 354.0 430 46.3
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.1e-95 353.6 423 46.1
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 4.7e-95 352.4 423 46.6
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 8.0e-95 351.7 423 45.4
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 1.8e-94 350.5 424 47.2
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.8e-94 350.5 430 49.1
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 6.8e-94 348.6 421 45.8
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 1.2e-93 347.8 421 45.8
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 1.5e-93 347.4 421 46.1
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 2.0e-93 347.1 421 45.1
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 2.0e-93 347.1 421 46.1
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 7.5e-93 345.1 424 45.5
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 7.5e-93 345.1 433 45.7
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 9.8e-93 344.7 421 45.8
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 2.2e-92 343.6 433 46.0
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 2.9e-92 343.2 413 47.0
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.4e-91 340.9 382 49.0
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.4e-91 340.1 371 50.4
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 3.2e-91 339.7 421 44.4
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.0e-89 334.7 417 44.8
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 1.0e-89 334.7 372 48.7
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 1.0e-89 334.7 353 54.1
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.7e-89 334.0 371 47.4
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 3.9e-89 332.8 415 46.0
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 1.5e-88 330.9 418 46.7
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.9e-88 330.5 416 44.2
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 3.3e-88 329.7 425 44.7
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 5.6e-88 328.9 404 47.5
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 5.6e-88 328.9 412 46.1
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 4.7e-87 325.9 414 44.4
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 7.5e-85 318.5 396 47.0
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 9.8e-85 318.2 483 41.4
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.2e-82 311.2 475 40.8
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.2e-82 311.2 340 50.3
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.7e-82 310.1 393 45.8
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 4.6e-82 309.3 425 42.6
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 7.8e-82 308.5 435 42.1
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 1.0e-81 308.1 379 45.9
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.6e-79 300.8 367 46.6
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 4.7e-79 299.3 391 42.2
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 8.1e-79 298.5 401 43.6
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.5e-77 294.3 426 41.1
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 2.0e-77 293.9 450 40.7
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 2.0e-77 293.9 450 40.7
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.1e-75 288.1 451 39.9
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 4.1e-75 286.2 441 40.1
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 4.6e-74 282.7 376 44.7
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 7.8e-74 282.0 393 42.5
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 7.3e-72 275.4 301 47.8
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 3.8e-68 263.1 318 44.3
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 1.6e-66 257.7 444 36.7
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 4.7e-63 246.1 328 45.4
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 9.9e-61 238.4 265 48.3
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 2.2e-60 237.3 264 47.0
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 1.5e-56 224.6 261 47.1
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 5.4e-51 206.1 270 44.4
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 1.2e-45 188.3 229 48.0
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 7.6e-45 185.7 434 32.0
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 6.4e-44 182.6 341 34.6
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.9e-33 146.7 111 67.6
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 5.1e-33 146.4 297 34.7
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 1.9e-32 144.4 289 34.3
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 1.4e-30 138.3 195 42.6
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.5e-29 134.8 216 38.0
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 3.7e-23 113.6 136 43.4
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 1.2e-21 108.6 136 41.2
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.4e-14 85.1 192 29.7
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 4.5e-13 80.1 177 30.5
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 3.9e-09 67.0 83 43.4


User provided reference genes

Program Settings