Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 8.9e-273 943.0 464 100.0
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.3e-244 849.4 461 90.5
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 7.9e-237 823.5 462 86.6
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.1e-235 819.7 465 86.2
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.1e-233 813.1 464 85.3
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.9e-231 805.1 458 84.9
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.1e-230 803.1 465 84.3
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.9e-230 802.4 453 84.1
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.9e-230 802.4 465 83.9
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 2.5e-230 802.0 471 83.9
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.2e-229 799.7 465 83.0
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.2e-229 799.7 464 84.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.7e-229 798.5 448 85.3
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.5e-229 798.1 446 85.2
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 3.5e-229 798.1 454 83.9
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 4.6e-229 797.7 456 83.8
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 7.9e-229 797.0 436 86.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.3e-228 796.2 484 81.4
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 3.9e-228 794.7 432 87.0
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 8.7e-228 793.5 439 85.6
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 8.7e-228 793.5 455 83.7
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 3.3e-227 791.6 430 87.4
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 4.3e-227 791.2 448 84.6
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 4.3e-227 791.2 460 82.4
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 2.8e-226 788.5 464 81.5
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.8e-226 788.5 459 83.2
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.8e-226 788.5 459 83.4
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.8e-226 788.5 454 82.8
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 6.3e-226 787.3 459 82.6
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 8.2e-226 786.9 465 82.2
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 8.2e-226 786.9 457 82.5
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.4e-225 786.2 460 82.6
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.4e-225 786.2 455 82.6
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.4e-225 785.4 430 86.7
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 4.1e-225 784.6 430 86.5
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.1e-225 784.6 445 84.3
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 4.1e-225 784.6 462 83.3
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 5.3e-225 784.3 485 79.0
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 6.9e-225 783.9 458 82.8
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.5e-224 782.7 450 83.8
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.5e-224 782.7 463 81.0
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.6e-224 781.9 461 83.1
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.6e-224 781.9 460 82.8
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.6e-224 781.9 431 85.6
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.4e-224 781.6 454 82.8
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 4.5e-224 781.2 460 80.7
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 4.5e-224 781.2 450 82.7
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 7.7e-224 780.4 430 85.3
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 7.7e-224 780.4 455 82.4
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.7e-223 779.2 476 79.8
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.9e-223 778.5 430 84.9
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 5.0e-223 777.7 427 85.2
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 4.2e-222 774.6 460 81.7
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.5e-222 774.2 428 86.2
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 5.5e-222 774.2 459 82.1
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 4.6e-221 771.2 450 81.1
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.0e-220 770.0 448 81.5
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 3.9e-220 768.1 451 80.9
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 6.7e-220 767.3 450 80.9
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 6.7e-220 767.3 419 86.4
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.5e-219 766.1 435 83.7
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.0e-219 765.8 446 80.9
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 3.3e-219 765.0 451 80.7
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 4.3e-219 764.6 443 81.0
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.7e-219 764.2 443 81.3
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.7e-218 762.7 432 82.6
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 3.7e-218 761.5 449 81.7
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 6.3e-218 760.8 443 80.8
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.4e-217 759.6 451 80.0
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.1e-217 758.1 452 79.2
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.7e-213 744.6 463 77.8
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 7.9e-213 743.8 420 82.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 7.9e-213 743.8 439 81.1
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 3.9e-212 741.5 442 79.2
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 2.0e-211 739.2 453 79.7
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 5.7e-211 737.6 426 80.5
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.8e-209 732.6 434 81.6
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.7e-207 726.1 436 79.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.1e-206 723.4 463 75.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 7.2e-206 720.7 404 84.7
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 7.2e-206 720.7 445 77.5
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 4.7e-205 718.0 500 72.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 3.0e-204 715.3 432 78.0
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.5e-203 713.0 429 77.9
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 4.4e-203 711.4 404 82.4
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.2e-202 709.1 476 74.6
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.7e-202 708.4 454 76.4
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.6e-197 691.8 431 78.0
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 8.8e-196 687.2 385 84.9
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.5e-195 686.4 493 70.8
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.8e-191 671.8 561 63.6
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 5.5e-190 667.9 383 82.5
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.6e-189 666.4 406 81.5
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.2e-187 660.2 464 71.6
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 3.8e-183 645.2 390 78.7
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 4.7e-181 638.3 360 83.6
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 6.1e-181 637.9 451 67.6
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.0e-175 620.5 436 71.3
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.5e-166 589.3 428 65.0
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.5e-166 589.3 380 75.8
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 3.6e-165 585.5 465 61.9
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.3e-162 577.0 494 63.0
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 2.2e-138 496.5 272 86.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 1.6e-136 490.3 303 79.5
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.1e-136 490.0 462 56.5
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.3e-135 486.5 303 78.2
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.6e-133 480.3 378 61.1
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.6e-120 437.2 260 84.2
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.1e-65 255.0 146 78.8
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 5.7e-62 242.7 189 65.1
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.8e-60 237.7 143 75.5
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 3.3e-41 173.7 104 76.0
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 3.5e-27 127.1 79 72.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 1.0e-26 125.6 70 84.3
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 2.7e-19 100.9 56 82.1
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 9.0e-15 85.9 53 81.1
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.3e-10 72.0 43 74.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.0e-10 70.9 42 73.8
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.1e-10 70.1 42 71.4
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 8.2e-08 62.8 40 77.5


User provided reference genes

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