Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 0.0e+00 1256.9 624 100.0
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 0.0e+00 1247.3 624 99.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 9.1e-305 1049.7 622 81.8
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.0e-295 1019.6 626 79.1
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 6.3e-282 973.8 626 74.9
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 7.3e-278 960.3 623 73.7
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 2.0e-275 952.2 625 73.9
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.7e-274 949.1 630 72.7
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 4.1e-273 944.5 631 72.4
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 9.2e-273 943.3 625 73.9
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.0e-272 942.2 630 72.1
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 1.3e-271 939.5 627 72.1
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.7e-271 939.1 623 72.9
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 2.3e-271 938.7 589 77.8
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.4e-268 929.5 627 71.1
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 4.0e-268 927.9 628 71.0
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 8.9e-268 926.8 627 70.5
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.2e-267 926.4 605 74.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 1.2e-267 926.4 627 70.5
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.5e-267 926.0 627 70.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.0e-267 925.6 627 71.8
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.6e-267 925.2 630 70.3
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.7e-266 922.5 671 66.6
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 9.2e-265 916.8 630 71.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.6e-264 916.0 627 70.5
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.7e-264 915.2 606 72.8
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 6.0e-264 914.1 631 70.0
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 7.8e-264 913.7 627 70.5
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 2.3e-263 912.1 627 68.9
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 8.1e-261 903.7 622 69.9
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 8.1e-261 903.7 626 69.0
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 5.2e-260 901.0 653 68.3
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 6.8e-260 900.6 620 68.5
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 8.9e-260 900.2 620 69.4
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.5e-259 899.4 621 68.3
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.0e-259 899.0 626 68.5
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 2.6e-259 898.7 626 68.2
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.3e-258 896.3 627 69.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.1e-257 893.3 626 68.1
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 3.2e-257 891.7 636 67.0
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 4.6e-256 887.9 620 68.1
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 4.6e-256 887.9 666 67.0
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 6.0e-256 887.5 622 69.1
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 6.0e-256 887.5 627 68.6
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.3e-255 886.3 626 67.6
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 2.3e-255 885.6 622 67.5
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 3.0e-255 885.2 608 70.1
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 5.1e-255 884.4 627 68.6
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 5.1e-255 884.4 621 66.8
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 5.1e-255 884.4 615 69.8
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 7.3e-254 880.6 626 67.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 9.5e-254 880.2 620 67.6
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.2e-253 879.8 621 66.7
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 3.6e-253 878.2 624 66.8
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 5.2e-252 874.4 633 67.5
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 3.4e-251 871.7 629 69.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 7.6e-251 870.5 598 70.6
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 2.9e-250 868.6 621 67.1
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 1.2e-248 863.2 573 71.2
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 2.3e-247 859.0 634 66.6
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 8.7e-247 857.1 571 72.2
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.5e-246 856.3 631 66.4
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.5e-246 855.5 583 71.2
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 1.6e-245 852.8 630 66.5
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 4.7e-245 851.3 635 66.1
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 7.6e-243 844.0 625 64.5
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 5.4e-241 837.8 597 69.0
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 7.1e-241 837.4 628 65.3
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 9.3e-241 837.0 611 66.4
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.0e-239 833.6 623 64.4
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 8.7e-239 830.5 629 65.5
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 1.9e-238 829.3 624 64.9
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.9e-238 829.3 625 64.0
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 4.8e-237 824.7 620 65.5
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.1e-236 823.5 596 67.3
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 4.0e-236 821.6 628 63.1
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 9.0e-236 820.5 626 62.5
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 9.3e-233 810.4 634 63.2
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 7.9e-232 807.4 629 62.6
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 5.6e-230 801.2 625 62.4
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 3.7e-229 798.5 625 61.6
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 8.1e-229 797.3 591 66.0
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 1.1e-228 797.0 625 61.8
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 9.9e-227 790.4 627 61.6
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 9.9e-227 790.4 627 61.6
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 3.8e-226 788.5 627 63.3
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 7.9e-224 780.8 626 61.2
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.6e-216 756.5 565 64.1
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 2.4e-212 742.7 629 58.2
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.4e-209 733.4 627 57.7
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 3.9e-199 698.7 440 77.3
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.6e-187 660.2 450 70.4
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 3.8e-186 655.6 624 52.4
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.7e-181 640.2 486 64.2
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 7.2e-177 624.8 640 50.2
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 1.4e-172 610.5 453 65.8
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.5e-171 605.5 416 70.2
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 2.0e-163 580.1 399 69.4
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 6.4e-157 558.5 603 48.3
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.8e-151 540.4 625 45.4
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 5.8e-142 508.8 400 61.8
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 8.3e-141 505.0 419 61.6
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 3.5e-123 446.4 441 55.3
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.6e-120 437.6 607 41.8
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 5.1e-114 416.0 762 34.9
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.6e-99 367.9 271 67.9
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 2.7e-54 217.6 175 59.4
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 4.1e-47 193.7 166 57.8
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 7.3e-44 183.0 163 56.4
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 5.4e-39 166.8 214 41.6
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.0e-38 163.3 153 51.0
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.3e-29 135.6 78 76.9
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.2e-19 102.4 86 62.8
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 4.9e-16 90.5 79 53.2
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.2e-15 87.8 87 52.9
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 9.0e-10 69.7 40 75.0
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 3.4e-09 67.8 47 68.1
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 8.4e-08 63.2 35 77.1
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 2.1e-06 58.5 225 26.2


User provided reference genes

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